New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5676306 =	52 (0.980)	6 (0.120)	4/238	NT	11.0%	coding (1699/1860 nt)	PP_4983	amine oxidase
	?	NC_002947	5676346 =	48 (0.970)					coding (1659/1860 nt)	PP_4983	amine oxidase

CCAAGCAGGACAAGCCAGGCTTCTTCAAGCGCCTGTTTGGCGGGGCGCAAGCGCCAGAGGCGAAGGTTGAGCCAATTGCCAAGGCTGAGGAAGTGGCGCCTGCACCTGCGCCCGCTCCACAGGCAGCTCCGGCTCCTGCAGCACCTGCGCCTGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5676461‑5676306 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgtggAGCGGGCGCAGGTGCAGGCGCCACTTCCTCAGCCTTGGCAATTGGCTCAACCTTCGCCTCTGGCGCTTGCGCCCCGCCAAACAGGCGCTTGAAGAAGCCTGGCTTGTCCTGCTTGGCCTCTTCGGTCTGCTTGGGCTCAGCTTTG  >  NC_002947/5676346‑5676490                                                                                                                                                                                                                                                                                                               CCAAGCAGGACAAGCCAGGCTTCTTCAAGCGCCTGTTTAGCGGGGCGCAAGCGCCAGAGGCGAAGGTTGAGCCAATTGCCAAGGCTGAGGAAGTGGCGCCTGCACCTGCGCCCGCTCCACAGGCAGCTCCGGCTCCTGCAGCACCTGCG                                                                                                                                                          >  8:293590/1‑149  CAAGCAGGACAAGCCAGGCTTCTTCAAGCGCCTGTTTGGCGGGGCGCAAGCGCCAGAGGCGAAGGTTGAGCCAATTGCCAAGGCTGAGGAAGTGGCGCCTGCACCTGCGCCCGCTCCACAGGCAGCTCCGGCTCCTGCAGCACCTGCGC                                                                                                                                                         >  2:85442/1‑149   AAGCAGGACAAGCCAGGCTTCTTCAAGCGCCTGTTTGGCGGGGCGCAAGCGCCAGAGGCGAAGGTTGAGCCAATTGCCAAGGCTGAGGAAGTGGCGCCTGCACCTGCGCCCGCTCCACAGGCAGCTCCGGCTCCTGCAGCACCTGCGCC                                                                                                                                                        >  6:102210/1‑149     GCAGGACAAGCCAGGCTTCTTCAAGCGCCTGTTTGGCGGGGCGCAAGCGCCAGAGGCGAAGGTTGAGCCAATTGCCAAGGCTGAGGAAGTGGCGCCTGCACCTGCGCCCGCTCCACAGGCAGCTCCGGCTCCTGCAGCACCTGCGCCTG                                                                                                                                                      >  5:204496/1‑149                                                                                                                    TCCACAGGCAGCTCCGGCTCCTGCAGCACCTGCGCCTGTGGAGCGGGCGCAGGTGCAGGCGCCACTTCCTCAGCCTTGGCAATTGGCTCAACCTTCGCCTCTGGCGCTTGCGCCCCGCCAAACAGGCGCTTGAAGAAGCCTGGCTTGTC                                       >  5:25780/1‑149                                                                                                                    TCCACAGGCAGCTCCGGCTCCTGCAGCACCTGCGCCTGTGGAGCGGGCGCAGGTGCAGGCGCCACTTCCTCAGCCTTGGCAATTGGCTCAACCTTCGCCTCTGGCGCTTGCGCCCCGCCAAACAGGCGCTTGAA                                                      <  2:302489/134‑1                                                                                                                    TCCACAGGCAGCTCCGGCTCCTGCAGCACCTGCGCCTGTGGAGCGGGCGCAGGTGCAGGCGCCACTTCCTCAGCCTTGGCAATTGGCTCAACCTTCGCCTCTGGCGCTTGCGCCCCGCCAAACAGGCGCTTGAA                                                      >  1:302489/1‑134                                                                                                                    TCCACAGGCAGCTCCGGCTCCTGCAGCACCTGCGCCTGTGGAGCGGGCGCAGGTGCAGGCGCCACTTCCTCAGCCTTGGCAATTGGCTCAACCTTCGCCTCTGGCGCTTGCGC                                                                           <  5:296490/113‑1                                                                                                                    TCCACAGGCAGCTCCGGCTCCTGCAGCACCTGCGCCTGTGGAGCGGGCGCAGGTGCAGGCGCCACTTCCTCAGCCTTGGCAATTGGCTCAACCTTCGCCTCTGGCGCTTGCGC                                                                           >  6:296490/1‑113                                                                                                                           GCAGCTCCGGCTCCTGCAGCACCTGCGCCTGTGGAGCGGGCGCAGGTGCAGGCGCCACTTCCTCAGCCTTGGCAATTGGCTCAACCTTCGCCTCTGGCGCTTGCGCCCCGCCAAACAGGCGCTTGAAGAAGCCTGGCTTGTCCTGCTTG                                <  6:25780/149‑1                                                                                                                                                     GCCTGTGGAGCGGGCGCAGGTGCAGGCGCCACTTCCTCAGCCTTGGCAATTGGCTCAACCTTCGCCTCTGGCGCTTGCGCCCCGCCAAACAGGCGCTTGAAGAAGCCTGGCTTGTCCTGCTTGGCCTCTTCGGTCTGCTTGGG            <  2:141539/143‑1                                                                                                                                                     GCCTGTGGAGCGGGCGCAGGTGCAGGCGCCACTTCCTCAGCCTTGGCAATTGGCTCAACCTTCGCCTCTGGCGCTTGCGCCCCGCCAAACAGGCGCTTGAAGAAGCCTGGCTTGTCCTGCTTGGCCTCTTCGGTCTGCTTGGG            >  1:141539/1‑143                                                                                                                                                        TGTGGAGCGGGCGCAGGTGCAGGCGCCACTTCCTCAGCCTTGGCAATTGGCTCAACCTTCGCCTCTGGCGCTTGCGCCCCGCCAAACAGGCGCTTGAAGAAGCCTGGCTTGTCCTGCTTGGCCTCTTCGGTCTGCTTGGGCTCAGCTTT   >  3:199636/1‑149                                                                                                                                                        TGTGGAGCGGGCGCAGGTGCAGGCGCCACTTCCTCAGCCTTGGCAATTGGCTCAACCTTCGCCTCTGGCGCTTGCGCCCCGCCAAACAGGCGCTTGAAGAAGCCTGGCTTGTCCTGCTTGGCCTCTTCGGTCTGCTT               <  5:102787/137‑1                                                                                                                                                        TGTGGAGCGGGCGCAGGTGCAGGCGCCACTTCCTCAGCCTTGGCAATTGGCTCAACCTTCGCCTCTGGCGCTTGCGCCCCGCCAAACAGGCGCTTGAAGAAGCCTGGCTTGTCCTGCTTGGCCTCTTCGGTCTGCTT               >  6:102787/1‑137                                                                                                                                                          TGGAGCGGGCGCAGGTGCAGGCGCCACTTCCTCAGCCTTGGCAATTGGCTCAACCTTCGCCTCTGGCGCTTGCGCCCCGCCAAACAGGCGCTTGAAGAAGCCTGGCTTGTCCTGCTTGGCCTCTTCGGTCTGCTTGGGCTCAGCTTTG  <  1:155584/148‑1                                                                                                                                                           GGAGCGGGCGCAGGTGCAGGCGCCACTTCCTCAGCCTTGGCAATTGGCTCAACCTTCGCCTCTGGCGCTTGCCCCCCGCCAAACAGGCGCTTGAAGAAGCCTGGC                                            >  8:235498/1‑105                                                                                                                                                                                                                                                                                                               CCAAGCAGGACAAGCCAGGCTTCTTCAAGCGCCTGTTTGGCGGGGCGCAAGCGCCAGAGGCGAAGGTTGAGCCAATTGCCAAGGCTGAGGAAGTGGCGCCTGCACCTGCGCCCGCTCCACAGGCAGCTCCGGCTCCTGCAGCACCTGCGCCTGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5676461‑5676306 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgtggAGCGGGCGCAGGTGCAGGCGCCACTTCCTCAGCCTTGGCAATTGGCTCAACCTTCGCCTCTGGCGCTTGCGCCCCGCCAAACAGGCGCTTGAAGAAGCCTGGCTTGTCCTGCTTGGCCTCTTCGGTCTGCTTGGGCTCAGCTTTG  >  NC_002947/5676346‑5676490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.