| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5726561 | 74 (1.400) | 3 (0.060) | 3/244 | NT | 4.1% | coding (405/2574 nt) | opgH | glucans biosynthesis glucosyltransferase H |
| ? | NC_002947 | = 5726599 | 69 (1.360) | coding (367/2574 nt) | opgH | glucans biosynthesis glucosyltransferase H | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCACCACCGTGTCCCACAGCGGCTGGTTGACGATTTCGTCAAAGTCCACGAACGACCAGCCCTGGTACGGCAGGATGCCTTTCATGTACCAGCCAGCGACG‑ATGGTCTGGCCGATCATCAGCGCCAGCAGAATGTAACGGCGGATAGAGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5726410‑5726561‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccgCCCAAGCGCGAGCTGCCGCCGGCCCGCTGGCGCACGGTCGGCTCTATCCGCCGTTACATTCTGCTGGCGCTGATGATCGGCCAGACCATCGTCGCTGGCTGGTACATGAAAGGCATCCTGCCGTACCAGGGCTGGTCGTTCGTG < NC_002947/5726599‑5726456 GCACCACCGTGTCCCACAGCGGCTGGTTGACGATTTCGTCAAAGTCCACGAACGACCAGCCCTGGTACGGCAGGATGCCTTTCATGTACCAGCCAGCGACG‑ATGGTCTGGCCGATCATCAGCGCCAGCAGAATGTAACGGCGGATAGAG > 1:326827/1‑149 CACCACCGTGTCCCACAGCGGCTGGTTGACGATTTCGTCAAAGTCCACGAACGACCAGCCCTGGTACGGCAGGATGCCTTTCATGTACCAGCCAGCGACG‑ATGGTCTGGCCGATCATCAGCGCCAGCAGAATGTAACGGCGGATAGAG > 2:77572/1‑148 ACCACCGTGTCCCACAGCGGCTTGTTGACGATTTCGTCAAATTCCACGAACGACCAGCCCTGGTACGGCAGGATGCCTTTCATGTACCAGCCATCGACGTTTAGTCTGGCCGATCATCAGCGCCAGCAGAATGTAACGGCGGATAGAGC < 1:77572/149‑1 CCACCGTGTCCCACAGCGGCTGGTTGACGATTTCGTCAAAGTCCACGAACGACCAGCCCTGGTACGGCAGGATGCCTTTCATGTACCAGCCAGCGACG‑ATGGTCTGGCCGATCATCAGCGCCAGCAGAATGTAACGGCGGATAGAGCC > 1:287703/1‑148 CACGAACGACCAGCCCTGGTACGGCAGGATGCCTTTCATGTACCAGCCAGCGACG‑ATGGTCTGGCCGATCATCAGCGCCAGCAGAATGTAACGGCGGATAGAGCCGCCCAAGCGCGAGCTGCCGCCGGCCCGCTGGCGCACGGTCGGCT < 3:206419/149‑1 CACGAACGACCAGCCCTGGTACGGCAGGATGCCTTTCATGTACCAGCCAGCGACG‑ATGGTCTGGCCGATCATCAGCGCCAGCAGAATGTAACGGCGGATAGAGCCGCCCAAGCGCGAGCTGCCGCCGGCCCGCTGGCGCACGGTCGGCT > 4:206419/1‑149 ACGAACGACCAGCCCTGGTACGGCAGGATGCCTTTCATGTACCAGCCAGCGACG‑ATGGTCTGGCCGATCATCAGCGCCAGCAGAATGTAACGGCGGATAGAGCCGCCCAAGCGCGAGCTGCCGCCGGCCCGCTGGCGCACGGTCGGCTC < 2:303883/149‑1 AGCCGCCCAAGCGCGAGCTGCCGCCGGCCCGCTGGCGCACGGTCGGCTCTATCCGCCGTTACATTCTGCTGGCGCTGATGATCGGCCAGACCATCGTCGCTGGCTGGTACATGAAAGGCATCCTGCCGTACCAGGGCTGGTCGTTCGTG < 1:287656/149‑1 AGCCGCCCAAGCGCGAGCTGCCGCCGGCCCGCTGGCGCACGGTCGGCTCTATCCGCCGTTACATTCTGCTGGCGCTGATGATCGGCCAGACCATCGTCGCTGGCTGGTACATGAAAGGCATCCTGCCGTACCAGGGCTGGTCGTTCGTG < 7:78663/149‑1 GCACCACCGTGTCCCACAGCGGCTGGTTGACGATTTCGTCAAAGTCCACGAACGACCAGCCCTGGTACGGCAGGATGCCTTTCATGTACCAGCCAGCGACG‑ATGGTCTGGCCGATCATCAGCGCCAGCAGAATGTAACGGCGGATAGAGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5726410‑5726561‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccgCCCAAGCGCGAGCTGCCGCCGGCCCGCTGGCGCACGGTCGGCTCTATCCGCCGTTACATTCTGCTGGCGCTGATGATCGGCCAGACCATCGTCGCTGGCTGGTACATGAAAGGCATCCTGCCGTACCAGGGCTGGTCGTTCGTG < NC_002947/5726599‑5726456 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |