| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5868140 = | 42 (0.800) | 4 (0.080) | 3/240 | NT | 8.5% | coding (424/807 nt) | lgt | prolipoprotein diacylglyceryl transferase |
| ? | NC_002947 | 5868173 = | 46 (0.920) | coding (391/807 nt) | lgt | prolipoprotein diacylglyceryl transferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
GTATGGAAAGGCGGTATGTCGTTCCACGGTGGCTTCATCGGCGTGATGCTGGCGGCCTTGTGGTTCGGCAAGCGCAACAACAAGTCGTTCTTCGAGCTGATGGACTTCGTCGCCCCGCTGGTGCCGATTGGCCTGGGGGCCGGGCGTATCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5868293‑5868140‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcggcaCCAGCGGGGCGACGAAGTCCATCAGCTCGAAGAACGACTTGTTGTTGCGCTTGCCGAACCACAAGGCCGCCAGCATCACGCCGATGAAGCCACCGTGGAACGACATACCGCCTTTCCATACCTCGAAGATCAGCGTCGGGTTGGCC > NC_002947/5868173‑5868318 GTATGGAAAGGCGGTATGTCGTTCCACGGTGGCTTCATCGGCGTGATGCTGGCGGCCTTGTGGTTCGGCAAGCGCAACAACAAGTCGTTCTTCGAGCTGATGGACTTCGTCGCCCCGCTGGTGCCGATTGGCCTGGGGGCCGGGCGTAT < 4:173880/149‑1 TGGAAAGGCGGTATGTCGTTCCACGGTGGCTTCATCGGCGTGATGCTGGAGGCCTTGTGGTTCGGCAAGCGCAACAACAAGTCGTTCTTCGAGCTGATGGACTTCGTCGCCCCGCTGGTGCCGATTGGCCTGGGGGCCGGGCGTATCGG > 7:271667/1‑149 GAAAGGCGGTATGTCGTTCCACGGTGGCTTCATCGGCGTGATGCTGGCGGCCTTGTGGTTCGGCAAGCGCAACAACAAGTCGTTCTTCGAGCTGATGGACTTCGTCGCCCCGCTGGTGCCGATTGGCCTGGGGGCCGGGCGTATCGGC > 2:71695/1‑148 GTGCCGATTGGCCTGGGGGCCGGGCGTATCGGCACCAGCGGGGCGACGAAGTCCATCAGCTCGAAGAACGACTTGTTGTTGCGCTTGCCGAACCACAAGGCCGCCAGCATCACGCCGATGAA < 7:40678/122‑1 GTGCCGATTGGCCTGGGGGCCGGGCGTATCGGCACCAGCGGGGCGACGAAGTCCATCAGCTCGAAGAACGACTTGTTGTTGCGCTTGCCGAACCACAAGGCCGCCAGCATCACGCCGATGAA > 8:40678/1‑122 GTGCCGATTGGCCTGGGGGCCGGGCGTATCGGCACCAGCGGGGCGACGAAGTCCATCAGCTCGAAGAACGACTTGTTGTTGCGCTTGCCGAACCACAAGGCCGCCAGCATCACGCCGATGA < 1:199407/121‑1 GTGCCGATTGGCCTGGGGGCCGGGCGTATCGGCACCAGCGGGGCGACGAAGTCCATCAGCTCGAAGAACGACTTGTTGTTGCGCTTGCCGAACCACAAGGCCGCCAGCATCACGCCGATGA > 2:199407/1‑121 TCGGCACCAGCGGGGCGACGAAGTCCATCAGCTCGAAGAACGACTTGTTGTTGCGCTTGCCGAACCACAAGGCCGCCAGCATCACGCCGATGAAGCCACCGTGGAACGACATACCGCCTTTCCATACCTCGAAGATCAGCGTCGGGTTG < 7:85207/149‑1 TCGGCACCAGCGGGGCGACGAAGTCCATCAGCTCGAAGAACGACTTGTTGTTGCGCTTGCCGAACCACAAGGCCGCCAGCATCACGCCGATGAAGCCACCGTGGAACGACATACCGCCTTTCCATACCTCGAAGATCAGCGTCGGGTTG > 8:85207/1‑149 TCGGCACCAGCGGGGCGACGAAGTCCATCAGCTCGAAGAACGACTTGTTGTTGCGCTTGCCGAACCACAAGGCCGCCAGCATCACGCCGATGAAGCCACCGTG > 3:52837/1‑103 TCGGCACCAGCGGGGCGACGAAGTCCATCAGCTCGAAGAACGACTTGTTGTTGCGCTTGCCGAACCACAAGGCCGCCAGCATCACGCCGATGAAGCCACCGTG < 4:52837/103‑1 GCACCAGCGGGGCGACGAAGTCCATCAGCTCGAAGAACGACTTGTTGTTGCGCTTGCCGAACCACAAGGCCGCCAGCATCACGCCGATGAAGCCACCGTGGAACGACATACCGCCTTTCCATACCTCGAAGATCAGCGTCGGGTTGGCC < 4:125528/149‑1 GTATGGAAAGGCGGTATGTCGTTCCACGGTGGCTTCATCGGCGTGATGCTGGCGGCCTTGTGGTTCGGCAAGCGCAACAACAAGTCGTTCTTCGAGCTGATGGACTTCGTCGCCCCGCTGGTGCCGATTGGCCTGGGGGCCGGGCGTATCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5868293‑5868140‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcggcaCCAGCGGGGCGACGAAGTCCATCAGCTCGAAGAACGACTTGTTGTTGCGCTTGCCGAACCACAAGGCCGCCAGCATCACGCCGATGAAGCCACCGTGGAACGACATACCGCCTTTCCATACCTCGAAGATCAGCGTCGGGTTGGCC > NC_002947/5868173‑5868318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |