New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5927638 | 60 (1.140) | 4 (0.080) | 4/242 | NT | 6.5% | coding (257/1623 nt) | PP_5195 | iron ABC transporter permease |
? | NC_002947 | = 5927662 | 57 (1.130) | coding (233/1623 nt) | PP_5195 | iron ABC transporter permease |
CGGTGGAACGCACCCGAGGCAGGCGCATTGGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5927489‑5927638 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagccTCTGCGACTTCCCCGGTCGACGCTGGCTGGACTGGGCGCTGATGCTACCGTTCGCCATCCCGGCCTACGTGCTGGCGTTCGTCTTCGTCGGCCTGCTGGACTTTGCCGGCCCGGTGCAAAGCGCCCTGCGCGAGGTGTTCGGGCCAAT < NC_002947/5927662‑5927515 CGGTGGAACGCACCCGAGGCAGGCGCATTGGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGC > 7:129546/1‑149 gcCCCGACCACCTCCCGCGGGGCGCTTTGCACCGGGCCGCCAAAGTCCAGCTGGCCTACGAAGACCAACGCCAGCACGTAGGCGGGTATGGCTAACGGTAGCATCAGCGCCCAGTCCAGCCTCTGCGACTTCCCCGGGCGACGCTGGC < 8:192831/146‑1 CACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCCTCTGCGACTTCCCCGGTCGACGCTGGCTGGACTGGG < 2:278687/149‑1 CGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCCTCTGCGACTTCCCCGGTCGACGCTGGCTGGA < 5:8349/139‑1 CGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCCTCTGCGACTTCCCCGGTCGAAGCTGGCTGGA > 6:8349/1‑139 CAGCCTCTGCGACTTCCCCGGTCGACGCTGGCTGGACTGGGCGCTGATGCTACCGTTCGCCATCCCGGCCTACGTGCTGGCGTTCGTCTTCGTCGGCCTGCTGGACTTTGCCGGCCCGGTGCAAAGCGCCCTGCGCGAGGTGTTCGGGC > 2:14900/1‑149 CTCTGCGACTTCCCCGGTCGACGCTGGCTGGACTGGGCGCTGATGCTACCGTTCGCCATCCCGGCCTACGTGCTGGCGTTCGTCTTCGTCGGCCTGCTGGACTTTGCCGGCCCGGTGCAAAGCGCCCTGCGCGAGGTGTTCGGGCCAAT < 1:145485/149‑1 CGGTGGAACGCACCCGAGGCAGGCGCATTGGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5927489‑5927638 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagccTCTGCGACTTCCCCGGTCGACGCTGGCTGGACTGGGCGCTGATGCTACCGTTCGCCATCCCGGCCTACGTGCTGGCGTTCGTCTTCGTCGGCCTGCTGGACTTTGCCGGCCCGGTGCAAAGCGCCCTGCGCGAGGTGTTCGGGCCAAT < NC_002947/5927662‑5927515 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |