New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 592763860 (1.140)4 (0.080) 4/242 NT 6.5% coding (257/1623 nt) PP_5195 iron ABC transporter permease
?NC_002947 = 5927662 57 (1.130)coding (233/1623 nt) PP_5195 iron ABC transporter permease

CGGTGGAACGCACCCGAGGCAGGCGCATTGGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5927489‑5927638
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagccTCTGCGACTTCCCCGGTCGACGCTGGCTGGACTGGGCGCTGATGCTACCGTTCGCCATCCCGGCCTACGTGCTGGCGTTCGTCTTCGTCGGCCTGCTGGACTTTGCCGGCCCGGTGCAAAGCGCCCTGCGCGAGGTGTTCGGGCCAAT  <  NC_002947/5927662‑5927515
                                                                                                                                                                                                                                                                                                          
CGGTGGAACGCACCCGAGGCAGGCGCATTGGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGC                                                                                                                                                       >  7:129546/1‑149
                             gcCCCGACCACCTCCCGCGGGGCGCTTTGCACCGGGCCGCCAAAGTCCAGCTGGCCTACGAAGACCAACGCCAGCACGTAGGCGGGTATGGCTAACGGTAGCATCAGCGCCCAGTCCAGCCTCTGCGACTTCCCCGGGCGACGCTGGC                                                                                                                           <  8:192831/146‑1
                                     CACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCCTCTGCGACTTCCCCGGTCGACGCTGGCTGGACTGGG                                                                                                                  <  2:278687/149‑1
                                          CGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCCTCTGCGACTTCCCCGGTCGACGCTGGCTGGA                                                                                                                       <  5:8349/139‑1
                                          CGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCCTCTGCGACTTCCCCGGTCGAAGCTGGCTGGA                                                                                                                       >  6:8349/1‑139
                                                                                                                                                 CAGCCTCTGCGACTTCCCCGGTCGACGCTGGCTGGACTGGGCGCTGATGCTACCGTTCGCCATCCCGGCCTACGTGCTGGCGTTCGTCTTCGTCGGCCTGCTGGACTTTGCCGGCCCGGTGCAAAGCGCCCTGCGCGAGGTGTTCGGGC      >  2:14900/1‑149
                                                                                                                                                     CTCTGCGACTTCCCCGGTCGACGCTGGCTGGACTGGGCGCTGATGCTACCGTTCGCCATCCCGGCCTACGTGCTGGCGTTCGTCTTCGTCGGCCTGCTGGACTTTGCCGGCCCGGTGCAAAGCGCCCTGCGCGAGGTGTTCGGGCCAAT  <  1:145485/149‑1
                                                                                                                                                                                                                                                                                                          
CGGTGGAACGCACCCGAGGCAGGCGCATTGGCCCGAACACCTCGCGCAGGGCGCTTTGCACCGGGCCGGCAAAGTCCAGCAGGCCGACGAAGACGAACGCCAGCACGTAGGCCGGGATGGCGAACGGTAGCATCAGCGCCCAGTCCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5927489‑5927638
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagccTCTGCGACTTCCCCGGTCGACGCTGGCTGGACTGGGCGCTGATGCTACCGTTCGCCATCCCGGCCTACGTGCTGGCGTTCGTCTTCGTCGGCCTGCTGGACTTTGCCGGCCCGGTGCAAAGCGCCCTGCGCGAGGTGTTCGGGCCAAT  <  NC_002947/5927662‑5927515

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.