New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 606343665 (1.230)4 (0.080) 4/242 NT 6.4% coding (325/558 nt) ubiC chorismate pyruvate‑lyase
?NC_002947 = 6063485 56 (1.110)coding (374/558 nt) ubiC chorismate pyruvate‑lyase

TGGCAGCCGCTGCGCGATGACGAATGCCAGGCGCTGGGCATCGCTGCCGGCGCCGAAGGCTGGGTGCGCGAAGTGTATCTGCGCGGCCATGGCCAACCTTGGGTATTCGCCCGCAGCGTGGCCAGCCGCAGCGCCCTGGAACGTGGTGGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6063283‑6063436
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggTCGCAGAACAGCAGCTCGCCC‑AGCGAGCGGCTGCCCAAGGTTTCCAGGTCCAGGCCACCACGTTCCAGGGCGCTGCGGCTGGCCACGCTGCGGGCGAATACCCAAGGTTGGCCATGGCCGCGCAGATACACTTCGCGCACCCA  <  NC_002947/6063485‑6063343
                                                                                                                                                                                                                                                                                                          
TGGCAGCCGCTGCGCGATGACGAATGCCAGGCGCTGGGCATCGCTGCCGGCGCCGAAGGCTGGGTGCGCGAAGTGTATCTGCGCGGCCATGGCCAACCTTGGGTATTCGCCCGCAGCGTGGCCAGCCGCAGCGCCCTGGAACGTGGTGG                                                                                                                                                       >  3:321565/1‑149
   CAGCCGCTGCGCGATGACGAATGCCAGGCGCTGGGCATCGCTGCCGGCGCCGAAGGCTGGGTGCGCGAAGTGTATCTGCGCGGCCATGGCCAACCTTGGGTATTCGCCCGCAGCGTGGCCAGCCGCAGCGCCCTGGAACGTGGTGGCCT                                                                                                                                                    <  7:87071/149‑1
   CAGCCGCTGCGCGATGACGAATGCCAGGCGCTGGGCATCGCTGCCGGCGCCGAAGGCTGGGTGCGCGAAGTGTATCTGCGCGGCCATGGCCAACCTTGGGTATTCGCCCGCAGCGTGGCCAGCCGCAGCGCCCTGGAACGTGGTGGCCT                                                                                                                                                    <  7:92080/149‑1
                                            TGCCGGCGCCGAAGGCTGGGTGCGCGAAGTGTATCTGCGCGGCCATGGCCAACCTTGGGTATTCGCCCGCAGCGTGGCCAGCCGCAGCGCCCTGGAACGTGGTGGCCTGGTCGCAGAACAGCAGCTCGCCC‑AGCGAGCGGCTGCCCAAG                                                                                                          >  2:62431/1‑149
                                                 GCGCCGAAGGCTGGGTGCGCGAAGTGTATCTGCGCGGCCATGGCCAACCTTGGGTATTCGCCCGCAGCGTGGCCAGCCGCAGCGCCCTGGAACGTGGTGGCCTGGTCGCAGAACAGCAGCTCGCCC‑AGCGAGCGGCTGCCCAAGGTTTC                                                                                                     >  4:159542/1‑149
                                                                 GCGCGAAGTGTATCTGCGCGGCCATGGCCAACCTTGGGTATTCGCCCGCAGCGTGGCCAGCCGCAGCGCCCTGGAACGTGGTGGCCTGGTCGCAGAACAGCAGCTCGCCCAAGCGAGCGGCTGCCCAAGGTTTCCAGGTCCAGGCCACC                                                                                      <  1:62431/149‑1
                                                                  CGCGAAGTGTATCTGCGCGGCCATGGCCAACCTTGGGTATTCGCCCGCAGCGTGGCCAGCCGCAGCGCCCTGGAACGTGGTGGCCTGGTCGCAGAACAGCAGCTCGCCC‑AGCGAGCGGCTGCCCAAGGTTTCCAGGTCCAGGCCACCA                                                                                     <  3:159542/148‑1
                                                                                                                                                    GCCTGGTCGCAGAACAGCAGCTCGCCC‑AGCGAGCGGCTGCCCAAGGTTTCCAGGTCCAGGCCACCACGTTCCAGGGCGCTGCGGCTGGCCACGCTGCGGGCGAATACCCAAGGTTGGCCATGGCCGCGCAGATACACTTCGCGCACCCA  <  3:16843/149‑1
                                                                                                                                                    GCCTGGTCGCAGAACAGCAGCTCGCCC‑AGCGAGCGGCTGCCCAAGGTTTCCAGGTCCAGGCCACCACGTTCCAGGGCGCTGCGGCTGGCCACGCTGCGGGCGAATACCCAAGGTTGGCCATGGCCGCGCAGATACACTTCGCGCACC    >  4:321565/1‑147
                                                                                                                                                      CTGGTCGCGGAACAGCAGCTCGCCC‑AGCGAGCGGCTGCCCAAGGTTTCCAGGTCCAGGCCACCACGTTCCAGGGCGCTGCGGCTGGCCACGCTGCGGGCGAATACCCAAGGTTGG                                  <  1:229746/115‑1
                                                                                                                                                      CTGGTCGCGGAACAGCAGCTCGCCC‑AGCGAGCGGCTGCCCAAGGTTTCCAGGTCCAGGCCACCACGTTCCAGGGCGCTGCGGCTGGCCACGCTGCGGGCGAATACCCAAGGTTGG                                  >  2:229746/1‑115
                                                                                                                                                                                                                                                                                                          
TGGCAGCCGCTGCGCGATGACGAATGCCAGGCGCTGGGCATCGCTGCCGGCGCCGAAGGCTGGGTGCGCGAAGTGTATCTGCGCGGCCATGGCCAACCTTGGGTATTCGCCCGCAGCGTGGCCAGCCGCAGCGCCCTGGAACGTGGTGGCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6063283‑6063436
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggTCGCAGAACAGCAGCTCGCCC‑AGCGAGCGGCTGCCCAAGGTTTCCAGGTCCAGGCCACCACGTTCCAGGGCGCTGCGGCTGGCCACGCTGCGGGCGAATACCCAAGGTTGGCCATGGCCGCGCAGATACACTTCGCGCACCCA  <  NC_002947/6063485‑6063343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.