New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6163316 =	63 (1.190)	3 (0.060)	3/244	NT	5.1%	coding (1967/2013 nt)	PP_5405	transposase
	?	NC_002947	6163346 =	52 (1.030)					coding (1937/2013 nt)	PP_5405	transposase

GATCAGGTACGTCGAGGAGCTGCTGCTGATCTCAGAGACGAGCGCCCTGCGCATGAGCAGCATTTCGAAGACAGATTCAAACAGAATACAGGAGAGGAATGGGATGCTGGCGAGAGGAAATTTGGGCGGCCCTCGAAAGGTGGTGCTGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6163467‑6163316 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccaAATTTCCTCTCGCCAGCATCCCATTCCTCTCCTGTATTCTGTTTGAATCTGTCTTCGAAATGCTGCTCATGCGCAGGGCGCTCGTCTCTGAGATCAGCAGCAGCTCCTCGACGTACCTGATCAATAGCTTGAAGATCACGCAAG  >  NC_002947/6163346‑6163489                                                                                                                                                                                                                                                                                                          GATCAGGTACGTCGAGGAGCTGCTGCTGATCTCAGAGACGAGCGCCCTGCGCATGAGCAGCATTTCGAAGACAGATTCAAACAGAATACAGGAGAGGAATGGGATGCTGGCGAGAGGAAATTTGGGCGGCCCTCGAAAGGTGGTGCTG                                                                                                                                                      <  8:218801/148‑1   TCAGGTACGTCGAGGAGCTGCTGCTGATCTCAGAGACGAGCGCCCTGCGCATGAGCAGCATTTCGAAGACAGATTCAAACAGAATACAGGAGTGGAATGGGATGCTGGCGAGAGGAAATTTGGGCGGCCCTCGAAAGGTGGTGCTGCC                                                                                                                                                    <  8:197492/148‑1     AGGTACGTCGAGGAGCTGCTGCTGATCTCAGAGACGAGCGCCCTGCGCATGAGCAGCATTTCGAAGACAGATTCAAACAGAATACAGGAGGGGAATGGGATGCTGGCGAGAGGAAATTTGGGCGGCCCTCGAAAGGTGGTGCTGCCCA                                                                                                                                                  <  7:3131/148‑1                     TGCTGCTGATCTCAGAGACGAGCGCCCTGCGCATGAGCAGCATTTCGAAGACAGATTCAAACAGAATACAGGAGAGGAATGGGATGCTGGCGAGAGGAAATTTGGGCGGCCCTCGAAAGGTGGTGCTG                                                                                                                                                      <  8:51355/128‑1                     TGCTGCTGATCTCAGAGACGAGCGACCTGCGCATGAGCAGCATTTCGAAGACAGATTCAAACAGAATACAGGAGAGGAATGGGATGCTGGCGAGAGGAAATTTGGGCGGCCCTCGAAAGGTGGTGCTG                                                                                                                                                      >  7:51355/1‑128                                                                                                                GAGAGGAAATTTGGGCGGCCCTCGAAAGGTGGTGCTGCCCAAATTTCCTCTCGCCAGCATCCCATTCCTCTCCTGTATTCTGTTTGAATCTGTCTTCGAAATGCTGCTCATGCGCAGGGCGCTCGTCTCTGAGATCAGCAGCAGCTCCT                                      >  7:277122/1‑149                                                                                                                    GGAAATTTGGGCGGCCCTCGAAAGGTGGTGCTGCCCAAATTTCCTCTCGCCAGCATCCCATTCCTCTCCTGTATTCTGTTTGAATCTGTCTTCGAAATGCTGCTCATGCGCAGGGCGCTCGTCTCTGAGATCAGCAGCAGCTCCTCGAC                                  <  8:277122/149‑1                                                                                                                     GAAATTTGGGCGGCCCTCGAAAGGTGGTGCTGCCCAAATTTCCTCTCGCCAGCATCCCATTCCTCTCCTGTATTCTGTTTGAATCTGTCTTCGAAATGCTGCTCATGCGCAGGGCGCTCGTCTCTGAGATCAGCAGCAGCTCCTCGACG                                 >  5:86469/1‑149                                                                                                                                                    GCCCAAATTTCCTCTCGCCAGCATCCCATTCCTCTCCTGTATTCTGTTTGAATCTGTCTTCGAAATGCTGCTCATGCGCAGGGCGCTCGTCTCTGAGATCAGCAGCAGCTCCTCGACGTACCTGATCAATAGCTTGAAGATCACGCAAG  >  3:43914/1‑149                                                                                                                                                     CCCAAATTTCCTCTCGCCAGCATCCCATTCCTCTCCTGTATTCTGTTTGAATCTGTCTTCGAAATGCTGCTCATGCGCAGGGCGCTCGTCTCTGAGATCAGCAGCAGCTCCTCGACGTACCTGATCAATAGCTTGAAGATCACGCAA   <  6:86469/147‑1                                                                                                                                                      CCAAATTTCCTCTCGCCAGCATCCCATTCCTCTCCTGTATTCTGTTTGAATCTGTCTTCGAAATGCTGCTCATGCGCAGGGCGCTCGTCTCTGAGATCAGCAGCAGCTCCTCGACGTACCTGATCAATAGCTTGA              <  3:64826/135‑1                                                                                                                                                      CCAAATTTCCTCTCGCCAGCATCCCATTCCTCTCCTGTATTCTGTTTGAATCTGTCTTCGAAATGCTGCTCATGCGCAGGGCGCTCGTCTCTGAGATCAGCAGCAGCTCCTCGACGTACCTGATCAATAGCTTGA              >  4:64826/1‑135                                                                                                                                                      CCAAATTTCCTCTCGCCAGCATCCCATTCCTCTCCTGTATTCTGTTTGAATCTGTCTTCGAAATGCTGCTCATGCGCAGGGCGCTCGTCTCTGAGATCAGCAGCAGCTCCTCGACGTACCTGATCAATAGC                  <  1:163220/131‑1                                                                                                                                                      CCAAATTTCCTCTCGCCAGCATCCCATTCCTCTCCTGTATTCTGTTTGAATCTGTCTTCGAAATGCTGCTCATGCGCAGGGCGCTCGTCTCTGAGATCAGCAGCAGCTCCTCGACGTACCTGATCAATAGC                  >  2:163220/1‑131                                                                                                                                                        AAATTTCCTCTCGCCAGCATCCCATTCCTCTCCTGTATTCTGTTTGAATCTGTCTTCGAAATGCTGCTCATGCGCAGGGCGCTCGTCTCTGAGATCAGCAGCAGCTCCTCGACGTACCTGATCAATAGCTTGAA             <  7:172030/134‑1                                                                                                                                                        AAATTTCCTCTCGCCAGCATCCCATTCCTCTCCTGTATTCTGTTTGAATCTGTCTTCGAAATGCTGCTCATGCGCAGGGCGCTCGTCTCTGAGATCAGCAGCAGCTCCTCGACGTACCTGATCAATAGCTTGAA             >  8:172030/1‑134                                                                                                                                                                                                                                                                                                          GATCAGGTACGTCGAGGAGCTGCTGCTGATCTCAGAGACGAGCGCCCTGCGCATGAGCAGCATTTCGAAGACAGATTCAAACAGAATACAGGAGAGGAATGGGATGCTGGCGAGAGGAAATTTGGGCGGCCCTCGAAAGGTGGTGCTGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6163467‑6163316 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccaAATTTCCTCTCGCCAGCATCCCATTCCTCTCCTGTATTCTGTTTGAATCTGTCTTCGAAATGCTGCTCATGCGCAGGGCGCTCGTCTCTGAGATCAGCAGCAGCTCCTCGACGTACCTGATCAATAGCTTGAAGATCACGCAAG  >  NC_002947/6163346‑6163489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.