New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	649505 =	44 (0.830)	3 (0.060)	3/242	NT	6.4%	coding (173/1356 nt)	accC	acetyl‑CoA carboxylase biotin carboxylase subunit
	?	NC_002947	649553 =	46 (0.910)					coding (125/1356 nt)	accC	acetyl‑CoA carboxylase biotin carboxylase subunit

CCGATGAAGGCGAAACCGGATTTTTCCACCTGTTCGGCGAAGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGGCGACGGTCTTGATACCCAGCTCTTTGCAGGCACGCAGGATCCGCAGGGCAATTTCCCCGCGGTTGGCGATCAG  >  NC_002947/649358‑649653                                                                                                                                                    |                                                                                                                                                      tttgaatcgcggagagccaacgatgtctgggaagctcgaaaaagtcctgatcgccaaccgcggggaaattgccctgcggatcctgcgtgcctgcaaagagctgggtatcaagaccgtcgccgtgcactccactgccgaccgtgaactGa                                                                                                                                                      >  7:264464‑M1/148‑149 (MQ=255)  cGATGAAGGCGAAACCGGATTTTTCCACCTGTTCGGCGAAGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGAt                                                                                                                                                     <  5:110856/149‑1 (MQ=255)    gaatcgcggagagccaacgatgtctgggaagctcgaaaaagtcctgatcgccaaccgcggggaaattgccctgcggatcctgcgtgcctgcaaagagctgggtatcaagaccgtcgccgtgcactccactgccgaccgtgaactGATGc                                                                                                                                                   <  3:202713‑M1/5‑1 (MQ=255)    aTGAAGGCGAAACCGGATTTTTCCACCTGTTCGGCGAAGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATg                                                                                                                                                    >  3:82704/1‑148 (MQ=255)            gAAACCGGATTTTTCCACCTGTTCGGCGAAGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGa                                                                                                                                           <  7:144698/149‑1 (MQ=255)            gAAACCGGATTTTTCCACCTGTTCGGCGAAGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGa                                                                                                                                           <  1:33921/149‑1 (MQ=255)            gAAACCGGATTTTTCCACCTGTTCGGCGAAGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGa                                                                                                                                           >  3:177310/1‑149 (MQ=255)            gAAACCGGATTTTTCCACCTGTTCGGCGAAGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGa                                                                                                                                           >  2:241602/1‑149 (MQ=255)                  ggATTTTTCCACCTGTTCGGCGAAGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGa                                                                                                                                     >  4:304294/1‑149 (MQ=255)                        ttCCACCTGTTCGGCGAAGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑Ac                                                                                                                               <  4:83479/148‑1 (MQ=255)                           cACCTGTTCGGCGAAGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTTACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCg                                                                                                                            <  2:69220/148‑1 (MQ=255)                           cACCTGTTCGGCGAAGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGAt                                                                                                                                          >  4:119266/1‑135 (MQ=255)                           cACCTGTTCGGCGAAGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGAt                                                                                                                                          <  3:119266/135‑1 (MQ=255)                            aCCTGTTCGGCGAAGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTc                                                                                                                          <  7:258993/149‑1 (MQ=255)                                 ttCGGCGAAGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGc                                                                                                                       <  4:82704/147‑1 (MQ=255)                                    ggCGAAGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGc                                                                                                                  >  2:330766/1‑149 (MQ=255)                                        aaaagtcctgatcgccgaccgcggggaaattgccctgcggatcctgcgtgcctgcaaagagctgggtatcaagaccgtcgccgtgcactccactgccgaccgtgaactGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAg                                                                                                              <  2:216675‑M1/41‑1 (MQ=255)                                         aGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAgg                                                                                                             <  4:177310/149‑1 (MQ=255)                                         aGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAgg                                                                                                             <  7:300239/149‑1 (MQ=255)                                             ggCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCa                                                                                                         >  8:220465/1‑149 (MQ=255)                                                gTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCa                                                                                                      <  1:330766/149‑1 (MQ=255)                                                  atcgccgaccgcggggaaattgccctgcggatcctgcgtgcctgcaaagagctgggtatcaagaccgtcgccgtgcactccactgccgaccgtgaactGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCa                                                                                                      >  1:216675‑M1/99‑147 (MQ=255)                                                        ccAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGAc                                                                                                                                    >  1:291970/1‑112 (MQ=255)                                                        ccAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGAc                                                                                                                                    <  2:291970/112‑1 (MQ=255)                                                             aaGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCgg                                                                                          >  5:254053/1‑148 (MQ=255)                                                                 cGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGt                                                                                      <  7:220465/148‑1 (MQ=255)                                                                 cGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTg                                                                                     <  3:304294/149‑1 (MQ=255)                                                                 cGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTg                                                                                     >  5:360432/1‑149 (MQ=255)                                                                         gggTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCAc                                                                                                >  4:110763/1‑130 (MQ=255)                                                                         gggTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCAc                                                                                                <  3:110763/130‑1 (MQ=255)                                                                          ggTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACg                                                                            <  6:360432/149‑1 (MQ=255)                                                                          ggTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACg                                                                            <  6:10830/149‑1 (MQ=255)                                                                                tCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGGCGACg                                                                      >  3:160776/1‑149 (MQ=255)                                                                                tCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGGCGACg                                                                      >  1:26051/1‑149 (MQ=255)                                                                                      tGGGGCCAGGCTCTTCGGCGGCAGGGATGATCGCGGGTATATGCTGGTAGGAATCCTTTGACGATGCAGGGCCGATGCAGTCCG‑ACTCGTCTGCCAGTGCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGGCGACGGTCtt                                                                 <  3:289449/148‑1 (MQ=255)                                                                                        gcgcCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGGCGACGGTCTTGa                                                               <  6:254053/148‑1 (MQ=255)                                                                                         cgcCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGGCGACGGTCTTGATa                                                             >  4:208589/1‑149 (MQ=255)                                                                                            cAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCa                                                                                                      <  4:168276/105‑1 (MQ=255)                                                                                            cAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCa                                                                                                      >  3:168276/1‑105 (MQ=255)                                                                                               tCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGGc                                                                          >  5:72672/1‑130 (MQ=255)                                                                                               tCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGGc                                                                          <  6:72672/130‑1 (MQ=255)                                                                                                       gggtatcaagaccgtcgccgtgcactccactgccgaccgtgaactGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGt                                                                                                            <  4:236716‑M1/43‑1 (MQ=255)                                                                                                        cggcAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGGCGACGGTCTTGATACCCAGCTCTTTGCAg                                              <  1:241602/149‑1 (MQ=255)                                                                                                        cggcAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGGCGACGGTCTTGATACCCAGCTCTTTGCAg                                              <  3:208589/149‑1 (MQ=255)                                                                                                         ggcAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGTCGACGGTCTTGATAcc                                                           <  6:165479/135‑1 (MQ=255)                                                                                                         ggcAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGGCGACGGTCTTGATAcc                                                           >  5:165479/1‑135 (MQ=255)                                                                                                             gCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCGCACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGt                                                                                      <  1:242915/105‑1 (MQ=255)                                                                                                             gCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGt                                                                                      >  2:242915/1‑104 (MQ=255)                                                                                                                            atatGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGGCGACTGTCTTGATACCCAGCTCTTTGCa                                               <  5:325846/128‑1 (MQ=255)                                                                                                                            atatGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGGCGACGGTCTTGATACCCAGCTCTTTGCa                                               >  6:325846/1‑128 (MQ=255)                                                                                                                                    gTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGGGAGGCCCAGGTGCAGCATTTCACGGTGGGCAGTGGAGTGGACGGCGACGGTCTTGATTCCCAGCTGTTTTCAGGGACGGAGGATCCGCAGGGCAATTTcca                  >  5:86985/1‑148 (MQ=255)                                                                                                                                                   cGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGGCGACGGTCTTGATACCCAGCTCTTTGCAGGCACGCAGGATCCGCAGGGCAATTTCCCCGCGGTTGGCGAt     >  3:144791/1‑147 (MQ=255)                                                                                                                                                    GATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGGCGACGGTCTTGATACCCAGCTCTTTGCAGGCACGCAGGATCCGCAGGGCAATTTCCCCGCGGTTGGCGATCAg  <  3:74566‑M1/149‑1 (MQ=255)                                                                                                                                                    GATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGGCGACGGTCTTGATACCCAGCTCTTTGCAGGCACGCAGGATCCGCAGGGCAATTTCCCCGCGGTTGGCGATCAg  <  4:116729‑M1/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      CCGATGAAGGCGAAACCGGATTTTTCCACCTGTTCGGCGAAGTCGGCGTTTTCCGCCAGGAAGCCGTAACCCGGGTGAATCGCAGTGGCGCCAGTCACTTCGGCGGCAGCGATGATCGCGGGGATATGCAGGTAGGAATCCTTGGACGATGCAGGGCCGATGCAGACCG‑ACTCGTCTGCCAGGCCCAGGTGCATCAGTTCACGGTCGGCAGTGGAGTGCACGGCGACGGTCTTGATACCCAGCTCTTTGCAGGCACGCAGGATCCGCAGGGCAATTTCCCCGCGGTTGGCGATCAG  >  NC_002947/649358‑649653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.