New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 88577661 (1.150)4 (0.080) 4/246 NT 6.8% coding (1687/2718 nt) PP_0767 LuxR family transcriptional regulator
?NC_002947 = 885814 51 (1.000)coding (1725/2718 nt) PP_0767 LuxR family transcriptional regulator

GTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGACGCTTTACGAAGGTTACCTGCTGGTCTCGCGTCTGCAGCCGGCTCA  >  NC_002947/885628‑885921
                                                                                                                                                    |                                                                                                                                                 
gTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCC                                                                                                                                                   >  4:74622‑M1/1‑149 (MQ=255)
 tCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCGGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCC                                                                                                                                                   <  3:206488‑M1/148‑1 (MQ=255)
   gACGGTGTCCAACCTGGCAATTGCCGATGGCGACTTCTGGCGGGCGCGAGGCTGGATCCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGGTGCATGCCC                                                                                                                                                   <  8:152906‑M1/146‑1 (MQ=255)
   gACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCC                                                                                                                                                   >  7:152906‑M1/1‑146 (MQ=255)
             aaCCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGtgct                                                                                                                                      <  2:75274/149‑1 (MQ=255)
                cTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCGTGCCCGTGGCGAAGTGCtgcg                                                                                                                                   >  3:301970/1‑149 (MQ=255)
                 tGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCtgcgt                                                                                                                                  >  3:342008/1‑149 (MQ=255)
                     cATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGtgctg                                                                                                                                     <  6:71741/142‑1 (MQ=255)
                     cATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGtgctg                                                                                                                                     >  5:71741/1‑142 (MQ=255)
                     cATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCAAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTgcgc                                                                                                                              >  6:65004/1‑149 (MQ=255)
                                gCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGt                                                                                                                    <  5:65004/148‑1 (MQ=255)
                                  gACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGtgc                                                                                                                                       <  6:192806/127‑1 (MQ=255)
                                  gACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGtgc                                                                                                                                       >  5:192806/1‑127 (MQ=255)
                                  gACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTgcg                                                                                                                 >  7:209679/1‑149 (MQ=255)
                                   aCTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCttggcgcacttcgtccagcgcacgcagcacttcgc                                                                                                                >  4:56827‑M1/1‑114 (MQ=255)
                                    cTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGcc                                                                                                               <  3:68013/149‑1 (MQ=255)
                                     ttCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGcc                                                                                                               >  3:178048/1‑148 (MQ=255)
                                          gCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAgggc                                                                                                         >  3:295264‑M2/1‑145 (MQ=255)
                                           cGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCt                                                                                                        >  4:291048/1‑149 (MQ=255)
                                            gggCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTg                                                                                                       <  3:291048/149‑1 (MQ=255)
                                               cccGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCttggcgcacttcgtccagcgcacgcagcacttcgccacgggcatgca                                                                                                    <  3:56827‑M1/149‑48 (MQ=255)
                                                ccGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAAc                                                                                                   >  5:191435/1‑149 (MQ=255)
                                                ccGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAAc                                                                                                   >  6:94241/1‑149 (MQ=255)
                                                  gAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGt                                                                                                 <  4:342008/149‑1 (MQ=255)
                                                  gAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGt                                                                                                 >  1:175878/1‑149 (MQ=255)
                                                     gCTGGTACCGGGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGTGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCt                                                                                               <  7:147060/148‑1 (MQ=255)
                                                     gCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCttggcgcacttcgtccagcgcacgcagcacttcgccacgg                                                                                                           <  3:211377‑M1/136‑41 (MQ=255)
                                                     gCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCttggcgcacttcgtccagcgcacgcagcacttcgccacgg                                                                                                           >  4:211377‑M1/1‑96 (MQ=255)
                                                     gCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCt                                                                                               <  8:209679/148‑1 (MQ=255)
                                                       tGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGc                                                                                             >  7:284097/1‑148 (MQ=255)
                                                        ggAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTg                                                                                              <  8:261351/146‑1 (MQ=255)
                                                        ggAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTg                                                                                              >  7:261351/1‑146 (MQ=255)
                                                         gAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCaa                                                                                           <  8:284097/148‑1 (MQ=255)
                                                         gAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCaa                                                                                           <  4:178048/148‑1 (MQ=255)
                                                          aaCCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAgg                                                                                         >  7:250997/1‑149 (MQ=255)
                                                           aCCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAggg                                                                                        <  6:191435/149‑1 (MQ=255)
                                                                    cccTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCTCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCttt                                                                                    <  1:278817/144‑1 (MQ=255)
                                                                    cccTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCttt                                                                                    >  2:278817/1‑144 (MQ=255)
                                                                      cTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGgcg                                                                               >  4:256222/1‑147 (MQ=255)
                                                                      cTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCa                                                                             <  8:250997/149‑1 (MQ=255)
                                                                          aGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCgg                                                                         <  3:256222/149‑1 (MQ=255)
                                                                          aGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCgg                                                                         <  5:94241/149‑1 (MQ=255)
                                                                              ggCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCg                                                                                  >  3:196372/1‑136 (MQ=255)
                                                                              ggCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCg                                                                                  <  4:196372/136‑1 (MQ=255)
                                                                                 ccAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGc                                                                                                      >  5:321103/1‑113 (MQ=255)
                                                                                 ccAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGc                                                                                                      <  6:321103/113‑1 (MQ=255)
                                                                                   aGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGcc                                                                <  1:126502/149‑1 (MQ=255)
                                                                                             tAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTgcgc                                                      <  2:175878/149‑1 (MQ=255)
                                                                                                ccccTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGc                                                   >  1:7440/1‑149 (MQ=255)
                                                                                                 cccTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTgc                                                                                                                  <  4:274863/85‑1 (MQ=255)
                                                                                                 cccTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTgc                                                                                                                  >  3:274863/1‑85 (MQ=255)
                                                                                                 cccTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGTTgg                                                                     <  4:98559/130‑2 (MQ=255)
                                                                                                 cccTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGTTgg                                                                     >  3:98559/1‑129 (MQ=255)
                                                                                                 cccTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCt                                                  >  2:328716/1‑149 (MQ=255)
                                                                                                 cccTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCt                                                  >  2:129830/1‑149 (MQ=255)
                                                                                                  ccTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCt                                                                                                                             <  3:31764/73‑1 (MQ=255)
                                                                                                  ccTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCt                                                                                                                             >  4:31764/1‑73 (MQ=255)
                                                                                                   cTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGa                                                >  5:262534/1‑149 (MQ=255)
                                                                                                   cTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGa                                                >  4:337453/1‑149 (MQ=255)
                                                                                                    ttGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCaa                                                                                           <  1:59113/105‑1 (MQ=255)
                                                                                                    ttGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCaa                                                                                           >  2:59113/1‑105 (MQ=255)
                                                                                                    ttGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGAc                                               >  2:87872/1‑149 (MQ=255)
                                                                                                           aGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGACGCTTTAc                                        <  1:129830/149‑1 (MQ=255)
                                                                                                              cgcTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGACGCTTTACGaa                                     <  1:328716/149‑1 (MQ=255)
                                                                                                               gcTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGACGCTTTACGAAg                                    <  2:7440/149‑1 (MQ=255)
                                                                                                                               cGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGACGCTTTACGAAGGTTACCTGCTGGtctc                    <  1:87872/149‑1 (MQ=255)
                                                                                                                                            tgcATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAgggcatgcagcacccgcgcccggtcgtaatgcgccagcgcctcgaacaaggggttaccgacccgctgggccagctccagggcctcgcggttccagcctcggg       <  3:56827‑M2/149‑103 (MQ=255)
                                                                                                                                            tgcATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGACGCTTTACGAAGGTTACCTGCTGGTCTCGCGTCTGCAGCCg       >  4:22360/1‑149 (MQ=255)
                                                                                                                                              cATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGACGCTTTACGAAGGTTACCTGCTGGtctc                    <  6:134758/134‑1 (MQ=255)
                                                                                                                                              cATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGACGCTTTACGAAGGTTACCTGCTGGtctc                    >  5:134758/1‑134 (MQ=255)
                                                                                                                                              cATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGACGCTTTACGAAGGTTACCTGCTGGTCTCGCGTCTGCAGCCgg      >  8:262001/1‑148 (MQ=255)
                                                                                                                                                 gCCCttggcgcacttcgtccagcgcacgcagcacttcgccacgggcatgcagcacccgcgcccggtcgtaatgcgccagcgcctcgaacaaggggttaccgacccgctgggccagctccagggcctcgcggttccagcctcgggcccgc  >  3:295264‑M1/1‑4 (MQ=255)
                                                                                                                                                   ccGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAgggcatgcagcacccgcgcccggtcgtaatgcgccagcgcctcgaacaaggggttaccgacccgctgggccagctccagggcctcgcggttccagc             >  4:211377‑M2/1‑40 (MQ=255)
                                                                                                                                                   ccGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAgggcatgcagcacccgcgcccggtcgtaatgcgccagcgcctcgaacaaggggttaccgacccgctgggccagctccagggcctcgcggttccagc             <  3:211377‑M2/136‑97 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
GTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGACGCTTTACGAAGGTTACCTGCTGGTCTCGCGTCTGCAGCCGGCTCA  >  NC_002947/885628‑885921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.