New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1189708 =	38 (0.720)	3 (0.060)	3/238	NT	6.3%	coding (106/762 nt)	tatC‑I	Sec‑independent protein translocase protein
	?	NC_002947	1189773 =	54 (1.090)					coding (41/762 nt)	tatC‑I	Sec‑independent protein translocase protein

GCGCACATCGCGGTCAGCTTGAACGGTGCCAGAAAGGGCGAGGTGACGCTGGTGGCGATCATGCTCGCGCCTTCCGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCATGGCGATACTCATGAAGCATTTTCCTTGGGCAGCACGGCCGTGGCCGCATCATTGG  >  NC_002947/1189566‑1189856                                                                                                                                               |                                                                                                                                                     cctctgcaacgcctggaacaggagatccgccagggcatcagcctgaacgcggaaccggccaatgatgcggccacggccgtgctgcccaaggaaaatgcttcatgagtatcgccatggaccctgccgcgagcatgcccctgacCGAacac                                                                                                                                                >  6:116483‑M1/143‑149 (MQ=255)  ctctgcaacgcctggaacaggagatccgccagggcatcagcctgaacgcggaaccggccaatgatgcggccacggccgtgctgcccaaggaaaatgcttcatgagtatcgccatggaccctgccgcgagcatgcccctgacCGAACAcc                                                                                                                                               <  5:50244‑M1/8‑1 (MQ=255)       aTCGCGGTCAGCTTGAACGGTGCCAGAAAGGGCGAGGTGACGCTGGTGGCGATCATGCTCGCGCCTTCCGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGc                                                                                                                                          <  8:129526/149‑1 (MQ=255)       aTCGCGGTCAGCTTGAACGGTGCCAGAAAGGGCGAGGTGACGCTGGTGGCGATCATGCTCGCGCCTTACGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGAGTGTACAGTGTCTGGGCAAAGGGGAACAGGCAGGCGAAAACCAATGc                                                                                                                                          >  5:321768/1‑149 (MQ=255)          gcgGTCAGCTTGAACGGTGCCAGAAAGGGCGAGGTGACGCTGGTGGCGATCATGCTCGCGCCTTCCGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGccac                                                                                                                                       <  5:28448/149‑1 (MQ=255)                     gAACGGTGCCAGAAAGGGCGAGGTGACGCTGGTGGCGATCATGCTCGCGCCTTCCGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAgg                                                                                                                             <  4:199493/148‑1 (MQ=255)                               aGAAAGGGCGAGGTGACGCTGGTGGCGATCATGCTCGCGCCTTCCGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAg                                                                                                                  <  4:333769/149‑1 (MQ=255)                               aGAAAGGGCGAGGTGACGCTGGTGGCGATCATGCTCGCGCCTTCCGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAg                                                                                                                  >  7:101745/1‑149 (MQ=255)                               aGAAAGGGCGAGGTGACGCTGGTGGCGATCATGCTCGCGCCTTCCGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAg                                                                                                                  >  3:333769/1‑149 (MQ=255)                                   aGGGCGAGGTGACGCTGGTGGCGATCATGCTCGCGCCTTCCGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGt                                                                                                              >  1:12019/1‑149 (MQ=255)                                           gTGACGCTGGTGGCTATCATGCTCGCGCCTTCCGGCAAAAAGCTCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGTCCTGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAg                                                                                                      <  6:321768/149‑1 (MQ=255)                                               cgcggaaccggccaatgatgcggccagcggccgtgctgcccaaggaaaatgcttcatgagtatcgccatggaccctgccgcgagcatgcccctgacCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTcg                                                                                                  <  1:182026‑M1/53‑1 (MQ=255)                                                gCTGGTGGCGATCATGCTCGCGCCTTCCGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTcgc                                                                                                 >  4:57726/1‑149 (MQ=255)                                                  tggtggCGATCATGCTCGCGCCTTCCGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTcgcg                                                                                                >  5:362339/1‑148 (MQ=255)                                                  tggtggCGATCATGCTCGCGCCTTCCGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTcgcg                                                                                                >  5:357467/1‑148 (MQ=255)                                                  tggtggCGATCATGCTCGCGCCTTCCGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTcgcg                                                                                                >  8:170004/1‑148 (MQ=255)                                                     aaccggccaatgatgcggccacggccgtgctgcccaaggaaaatgcttcatgagtatcgccatggaccctgccgcgagcatgcccctgacCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAgg                                                                                            >  5:177572‑M1/91‑149 (MQ=255)                                                               gCTCGCGCCTTCCGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTTTCTGGGCAGAGGGGAACATGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGCTCGCGCAGGTGGTCGGTCa                                                                                  >  6:102780/1‑149 (MQ=255)                                                                  tgcggccacggccgtgctgcccaaggaaaatgcttcatgagtatcgccatggaccctgccgcgagcatgcccctgacCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAggg                                                                               >  2:182026‑M1/78‑149 (MQ=255)                                                                   gcgcCTTCCGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAggg                                                                               <  3:57726/148‑1 (MQ=255)                                                                   gcgcCTTCCGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAgg                                                                                <  7:170004/147‑1 (MQ=255)                                                                      ccTTCCGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCAt                                                                           <  6:68437/149‑1 (MQ=255)                                                                            ggCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTcgc                                                                     <  8:13129/149‑1 (MQ=255)                                                                              cAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCgg                                                                   >  6:316176/1‑149 (MQ=255)                                                                                   aGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAggg                                                              >  3:186754/1‑149 (MQ=255)                                                                                    gcgcCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGt                                                             >  4:339916/1‑149 (MQ=255)                                                                                        cGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCAt                                                         <  4:186754/149‑1 (MQ=255)                                                                                        cGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCAt                                                         >  3:73414/1‑149 (MQ=255)                                                                                        cGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCAt                                                         <  3:339916/149‑1 (MQ=255)                                                                                         gTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCATg                                                        >  4:345399/1‑149 (MQ=255)                                                                                             cGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCATGGCGa                                                    <  8:101745/149‑1 (MQ=255)                                                                                                  cGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCATGGCGATACTc                                               <  2:12019/149‑1 (MQ=255)                                                                                                      tatGAGCGTGTACAGTGTCTGGGCAAAGGCGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCATGGCGATACTCATGa                                           <  5:316176/149‑1 (MQ=255)                                                                                                             gtgtACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCATGGCGATACTCATGAAGCAttt                                    >  5:109971/1‑149 (MQ=255)                                                                                                              tgtACAGTGTCTGGGCAGAGGGTAACAGGCCGGCTAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGAAGGTAGCGCAGGTGTTCGGTCAGGTTCATGCTCGCGGCAGGGTCCATGGCGATACTCATGAAGCAtttt                                   <  5:102780/149‑1 (MQ=255)                                                                                                                tACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTcc                                                           <  4:208920/123‑1 (MQ=255)                                                                                                                tACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCATGGCGATACTc                                               <  2:106620/135‑1 (MQ=255)                                                                                                                tACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCATGGCGATACTc                                               >  1:106620/1‑135 (MQ=255)                                                                                                                  cAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCATGGCGATACTCATGAAGCATTTTCCtt                               >  2:145840/1‑149 (MQ=255)                                                                                                                              aaaGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCATgg                                                       >  4:47060/1‑113 (MQ=255)                                                                                                                                      aCAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCATGGCGATACTCAt                                             >  8:495/1‑115 (MQ=255)                                                                                                                                      aCAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCATGGCGATACTCAt                                             <  7:495/115‑1 (MQ=255)                                                                                                                                      aCAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCATGGCGATACTCATGAAGCATTTTCCTTGGGCAGCACGGCCGTGGCCg           >  8:171719/1‑149 (MQ=255)                                                                                                                                               CGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCATGGCGATACTCATGAAGCATTTTCCTTGGGCAGCACGGCCGTGGCCGCATCATTgg  >  6:109971‑M1/1‑149 (MQ=255)                                                                                                                                               |                                                                                                                                                     GCGCACATCGCGGTCAGCTTGAACGGTGCCAGAAAGGGCGAGGTGACGCTGGTGGCGATCATGCTCGCGCCTTCCGGCAAAAAGCGCCGTAGCGGCTCGGATATGAGCGTGTACAGTGTCTGGGCAAAGGGGAACAGGCCGGCGAACACCAATGCCACCAGCGCCAGGCAACGCACCAGGCGTTTGCGCAGGTCGCGCAGGTGTTCGGTCAGGGGCATGCTCGCGGCAGGGTCCATGGCGATACTCATGAAGCATTTTCCTTGGGCAGCACGGCCGTGGCCGCATCATTGG  >  NC_002947/1189566‑1189856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.