New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2379567 =106 (2.010)7 (0.140) 7/248 NT 6.5% intergenic (+22/‑68) cmpX/PP_2088 protein CmpX/RNA polymerase sigma factor SigX
?NC_002947 2379609 = 99 (1.920)intergenic (+64/‑26) cmpX/PP_2088 protein CmpX/RNA polymerase sigma factor SigX

Only 100 of 122 total aligned reads displayed.

TTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGTTGGTGGCGCGTTCGCATG  >  NC_002947/2379421‑2379713
                                                                                                                                                  |                                                                                                                                                  
ttGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAGCTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATg                                                                                                                                                  <  5:54438/149‑1 (MQ=255)
      agGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGccgccg                                                                                                                                            <  3:177773/149‑1 (MQ=255)
           gAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGaaa                                                                                                                                       >  4:269055/1‑149 (MQ=255)
                  atatCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGAcc                                                                                                                                >  3:26361/1‑149 (MQ=255)
                    atCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCa                                                                                                                              >  2:246973/1‑149 (MQ=255)
                      cGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACg                                                                                                                            >  7:263417/1‑149 (MQ=255)
                      cGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACg                                                                                                                            >  1:326682/1‑149 (MQ=255)
                         ggagATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACgggg                                                                                                                         >  7:214010/1‑149 (MQ=255)
                             aTCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTcgc                                                                                                                     >  6:140255/1‑149 (MQ=255)
                              tCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTcgcg                                                                                                                    <  8:109332/149‑1 (MQ=255)
                              gtacagctcctcatgcgaacgcgccaccaactcttcgtctgtgagctcgcgggggtcatagcgcatgggcggcgaatgaactttattcaaaacggatctggccgacagtcaggtcaATGCCGCCGCGAAATTCGACCCACGGGGTcgcg                                                                                                                    <  3:146980‑M1/33‑1 (MQ=255)
                                ggTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTcgcgcg                                                                                                                  <  8:218409/149‑1 (MQ=255)
                                   aCGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCgcggc                                                                                                                >  3:42818/1‑148 (MQ=255)
                                    ctcctcatgcgaacgcgccaccaactcttcgtctgtgagctcgcgggggtcatagcgcatgggcggcgaatgaactttattcaaaacggatctggccgacagtcaggtcaATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGa                                                                                                              >  7:254701‑M1/111‑149 (MQ=255)
                                      gTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACa                                                                                                            >  2:31280/1‑149 (MQ=255)
                                       tGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACggg                                                                                                                          <  8:191187/134‑1 (MQ=255)
                                       tGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACAt                                                                                                           >  5:126732/1‑149 (MQ=255)
                                       ctcatgcgaacgcgccaccaactcttcgtctgtgagctcgcgggggtcatagcgcatgggcggcgaatgaactttattcaaaacggatctggccgacagtcaggtcaATGTCGCCGCGAAATTCGACCCACGGGGTcgcgcg                                                                                                                  <  4:236666‑M1/35‑1 (MQ=255)
                                       ctcatgcgaacgcgccaccaactcttcgtctgtgagctcgcgggggtcatagcgcatgggcggcgaatgaactttattcaaaacggatctggccgacagtcaggtcaATGTCGCCGCGAAATTCGACCCACGGGGTcgcgcg                                                                                                                  >  3:236666‑M1/108‑142 (MQ=255)
                                        gAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACAtt                                                                                                          <  1:235788/149‑1 (MQ=255)
                                        gAAGACGACGCTGCTGACCGATGATGGCCAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACAtt                                                                                                          >  1:194142/1‑149 (MQ=255)
                                         aaGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACAtt                                                                                                          >  6:308764/1‑148 (MQ=255)
                                          atgcgaacgcgccaccaactcttcgtctgtgagctcgcgggggtcatagcgcatgggcggcgaatgaactttattcaaaacggatctggccgacagtcaggtcaATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGa                                                                                                        >  4:146980‑M1/105‑149 (MQ=255)
                                          aGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCAc                                                                                                                             <  2:35507/128‑1 (MQ=255)
                                           gacgacGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGACGACATTGAc                                                                                                       >  6:146380/1‑149 (MQ=255)
                                              gacgCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCt                                                                                                     >  7:97155/1‑148 (MQ=255)
                                                 gctgctGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACt                                                                                                 <  4:26361/149‑1 (MQ=255)
                                                   tgctgACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCgcggc                                                                                                                <  8:285028/132‑1 (MQ=255)
                                                     ctgACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGACCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCg                                                                                             <  5:308764/149‑1 (MQ=255)
                                                         ccGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCa                                                                                         <  2:144007/149‑1 (MQ=255)
                                                            atgatgGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGc                                                                                           >  8:334826/1‑144 (MQ=255)
                                                                tgGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGt                                                                                  >  5:216412/1‑149 (MQ=255)
                                                                tgGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGt                                                                                  <  3:269055/149‑1 (MQ=255)
                                                                 ggCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACgggg                                                                                                                         <  2:275052/109‑1 (MQ=255)
                                                                 ggCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACgggg                                                                                                                         >  1:275052/1‑109 (MQ=255)
                                                                  gCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGttt                                                                                <  7:130078/149‑1 (MQ=255)
                                                                   cGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGtttt                                                                               <  7:334826/149‑1 (MQ=255)
                                                                   cGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACCGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGtttt                                                                               <  1:246973/149‑1 (MQ=255)
                                                                     aaCTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCTAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGa                                                                             <  8:320663/149‑1 (MQ=255)
                                                                      aCTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGa                                                                             <  4:42818/148‑1 (MQ=255)
                                                                        tGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAAt                                                                           >  8:281318/1‑148 (MQ=255)
                                                                          gtgtCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATaaa                                                                        <  6:216412/149‑1 (MQ=255)
                                                                          gtgtCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATaaa                                                                        <  7:281318/149‑1 (MQ=255)
                                                                          gtgtCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATaaa                                                                        <  5:140255/149‑1 (MQ=255)
                                                                           tgtCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAg                                                                       >  7:245402/1‑149 (MQ=255)
                                                                           tgtCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAg                                                                       >  4:323460/1‑149 (MQ=255)
                                                                                cTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTATTGAATGAAg                                                                       >  6:83795/1‑144 (MQ=255)
                                                                                   gCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGAc                                                                                                             <  1:170134/103‑1 (MQ=255)
                                                                                   gCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGAc                                                                                                             >  2:170134/1‑103 (MQ=255)
                                                                                     tcatagcgcatgggcggcgaatgaactttattcaaaacggatctggccgacagtcaggtcaATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGAc                                                                                                       >  3:256701‑M1/62‑107 (MQ=255)
                                                                                     tcatagcgcatgggcggcgaatgaactttattcaaaacggatctggccgacagtcaggtcaATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGAc                                                                                                       <  4:256701‑M1/46‑1 (MQ=255)
                                                                                     tAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCAt                                                                  <  4:232223/144‑1 (MQ=255)
                                                                                     tAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCAt                                                                  >  3:232223/1‑144 (MQ=255)
                                                                                       aCCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATaaa                                                                        <  7:74112/136‑1 (MQ=255)
                                                                                       aCCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATaaa                                                                        >  8:74112/1‑136 (MQ=255)
                                                                                       aCCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTcgccg                                                            <  2:194142/148‑1 (MQ=255)
                                                                                        ccGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCgccgcc                                                          >  4:8928/1‑149 (MQ=255)
                                                                                               ctgctTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATgcgc                                                   <  3:323460/149‑1 (MQ=255)
                                                                                                  ctTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTAt                                                >  7:146225/1‑149 (MQ=255)
                                                                                                  ctTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTAt                                                <  6:126732/149‑1 (MQ=255)
                                                                                                   ttGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGtttt                                                                               >  1:66761/1‑117 (MQ=255)
                                                                                                   ttGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGtttt                                                                               <  2:66761/117‑1 (MQ=255)
                                                                                                     gAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGa                                              <  1:31280/148‑1 (MQ=255)
                                                                                                              gTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTa                                                 <  4:124981/136‑1 (MQ=255)
                                                                                                              gTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAg                                    >  6:103875/1‑149 (MQ=255)
                                                                                                                  aTAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCAt                                                       >  4:13492/1‑126 (MQ=255)
                                                                                                                  aTAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGCCCCCCGCGAGCTca                                >  8:300956/1‑149 (MQ=255)
                                                                                                                   tAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATg                                               >  8:180403/1‑133 (MQ=255)
                                                                                                                   tAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATg                                               <  7:180403/133‑1 (MQ=255)
                                                                                                                   tAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTcac                               <  5:103875/149‑1 (MQ=255)
                                                                                                                      ccGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGa                            >  3:51246/1‑149 (MQ=255)
                                                                                                                        gCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAg                                    >  6:320597/1‑139 (MQ=255)
                                                                                                                         cTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTa                                                 <  7:307659/125‑1 (MQ=255)
                                                                                                                            aCCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGACGaa                        >  8:300404/1‑147 (MQ=255)
                                                                                                                             ccGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCcg                                        <  2:322458/130‑1 (MQ=255)
                                                                                                                             ccGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCcg                                        >  1:322458/1‑130 (MQ=255)
                                                                                                                              cGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGt                    >  5:261851/1‑149 (MQ=255)
                                                                                                                              cGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGt                    <  7:300404/149‑1 (MQ=255)
                                                                                                                                cacaAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACTGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCATATCCGTTTTGAATAAAGTTCATTCGCCGCCCAAGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGTtg                  >  5:250572/1‑149 (MQ=255)
                                                                                                                                aaaaaaaGCTGTTAATGTATGCCGCCGCGAAATTCGACCCAAGGGGTCGCGCGTCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGTATAAAGTTCATTCGCCTCCAATGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGTtg                  <  8:146225/146‑1 (MQ=255)
                                                                                                                                   aaaaGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCAtt                                                                 >  7:311455/1‑99 (MQ=255)
                                                                                                                                   aaaaGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCAtt                                                                 <  8:311455/99‑1 (MQ=255)
                                                                                                                                   aaaaGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGTtggtg               <  8:214010/149‑1 (MQ=255)
                                                                                                                                   aaaaGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACACACGAAGAGTtggtg               >  4:286467/1‑149 (MQ=255)
                                                                                                                                      aGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGTTGGTGgcg            <  2:326682/149‑1 (MQ=255)
                                                                                                                                      aGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGTTGGTGgcg            <  8:263417/149‑1 (MQ=255)
                                                                                                                                       gCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTc                                                                >  5:336032/1‑96 (MQ=255)
                                                                                                                                       gCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTc                                                                <  6:336032/96‑1 (MQ=255)
                                                                                                                                       gCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGTTGGTGgcgc           <  3:286467/149‑1 (MQ=255)
                                                                                                                                         tGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGTTGGTGGCGCGt         >  5:4392/1‑149 (MQ=255)
                                                                                                                                         tGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGTTGGTGGCGCGt         >  7:290002/1‑149 (MQ=255)
                                                                                                                                           ttAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGTTGGTGGCGCGTTc       >  5:75749/1‑149 (MQ=255)
                                                                                                                                             aaTGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGAc                                             <  3:231462/109‑1 (MQ=255)
                                                                                                                                             aaTGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGAc                                             >  4:231462/1‑109 (MQ=255)
                                                                                                                                             aaTGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGTTGGTGGCGCGTTCg      >  4:312279/1‑148 (MQ=255)
                                                                                                                                             aaTGTATGCCACCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGCCGAAGAGTTGGTGGCGCGTTCGc     >  3:251120/1‑149 (MQ=255)
                                                                                                                                                 tATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGTTGGTGGCGCGTTCGCATg  <  5:66412/148‑1 (MQ=255)
                                                                                                                                                  ATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGTtggt                <  6:237560‑M1/133‑1 (MQ=255)
                                                                                                                                                  ATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGTtggt                <  4:37078‑M1/133‑1 (MQ=255)
                                                                                                                                                  ATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGTtggt                >  5:237560‑M1/1‑133 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
TTGGAGAGGTCGAAGGGCATATCGAGGAGATCGGTACGGTGAAGACGACGCTGCTGACCGATGATGGCGAACTGGTGTCACTGGCTAACCGCGAGCTGCTTGAACAGCGCGTCAATAGCCGCTAACCGCACAAAAGCTGTTAATGTATGCCGCCGCGAAATTCGACCCACGGGGTCGCGCGGCGACATTGACCTGACTGTCGGCCAGATCCGTTTTGAATAAAGTTCATTCGCCGCCCATGCGCTATGACCCCCGCGAGCTCACAGACGAAGAGTTGGTGGCGCGTTCGCATG  >  NC_002947/2379421‑2379713

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.