| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2414829 | 86 (1.630) | 5 (0.100) | 3/238 | NT | 5.8% | coding (27/198 nt) | PP_2115 | hypothetical protein |
| ? | NC_002947 | = 2530695 | NA (NA) | intergenic (+114/‑67) | PP_2218/PP_2219 | transposase/hypothetical protein | |||||
Only 100 of 105 total aligned reads displayed.
GCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACC > NC_002947/2414689‑2414976 | gcTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCg < 3:263279/149‑1 (MQ=32) catcatCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGcctc < 4:189696/149‑1 (MQ=32) atcatcCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGcctcc < 2:121902/149‑1 (MQ=32) atcatcCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCATGCTCCCGGCAGGACCGCGCCGAAGGCCCCAAAC‑AGGGGGCGCAGCGCTTGACGGGCAACCATGCCCGTCACCACCCGTCGCAACGCCAGCGTTAGgccgcc > 4:272727/1‑149 (MQ=11) ggCCACTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCAACCGGCACGACCCCGCCGAACGCCCCAACC‑AGGGGCCTCAGCGCTTGACGGGCATCCATGCCCCGCACCAGCCTTCGCAAGGGCAGAGTTCGGCCGCCTGAAGTc > 8:197899/1‑149 (MQ=11) ctgcgctgcgCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaa < 3:206094/149‑1 (MQ=32) tgcgctgcgcTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTTACGGGCATCCCTGCCCGTCCCCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTcgcg > 6:329374/1‑146 (MQ=12) tgcgctgcgcTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGa > 5:138095/1‑147 (MQ=32) tgcgctgcgcTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGa < 6:138095/147‑1 (MQ=32) cgctgcgctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaaga < 3:317100/148‑1 (MQ=32) gctgcgctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatc < 1:227925/149‑1 (MQ=32) cgctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAACGCCCCATTC‑TGGGGCCTGAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaa < 1:285547/147‑1 (MQ=12) gctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatc > 7:251683/1‑144 (MQ=32) ctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatc < 7:223834/149‑1 (MQ=32) ggTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatc < 7:285279/149‑1 (MQ=32) gTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatca < 8:185276/149‑1 (MQ=32) ccccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGa > 5:163393/1‑129 (MQ=32) ccccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGa < 6:163393/129‑1 (MQ=32) cccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaaga < 4:168459/149‑1 (MQ=32) cccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatc > 5:147959/1‑145 (MQ=32) cccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCCTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaag > 3:281712/1‑148 (MQ=17) tCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatc > 5:203145/1‑148 (MQ=32) aCTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaag < 6:147959/149‑1 (MQ=32) tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCCTGCCCGTCACCTGCCTTGGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatc > 3:2256/1‑144 (MQ=17) tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCggagtgaggggcccccggagcgccgcgcaggggccggatgatgggagcgcagc > 5:133317‑M1/1‑96 (MQ=255) tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaaga > 4:156111/1‑148 (MQ=32) tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatc > 7:6108/1‑144 (MQ=32) cGGGCTTGCTCCCGGGAGTA‑CGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCggagcgagggaaccccggagcgtagcgcaggggccggatgataggagcgcagcgt > 1:43523‑M1/1‑94 (MQ=255) gggcttgCTCCCGGGAGTA‑CGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCggagcgagggaaccccggagcgtagcgcaggggccggatgataggagcgcagcgtt > 3:167428‑M1/4‑93 (MQ=255) gCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCggagtgaggggaccccggagcgcagcgcaggggccggatga > 2:242214‑M1/1‑92 (MQ=255) gCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCggagtgaggggaccccggagcgcagcgcaggggccggatga < 1:242214‑M1/133‑42 (MQ=255) cTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaaga > 2:88192/1‑148 (MQ=32) cTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaa < 2:110679/148‑1 (MQ=32) cTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaa < 1:88192/148‑1 (MQ=32) tCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATTCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaat > 2:288062/1‑111 (MQ=17) tCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGcctcct < 6:91609/100‑1 (MQ=33) tCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGcctcct > 5:91609/1‑100 (MQ=33) tCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatc > 2:201606/1‑145 (MQ=32) ggCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaa < 1:299855/149‑1 (MQ=32) ggCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatc > 6:212679/1‑147 (MQ=32) cAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaga < 5:212679/149‑1 (MQ=32) ggACCGCGCCGAAGGCCCGTTCC‑TGGGGCCTGAGCGCTTGACGGGCTTCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGGCTCCTGAAGTCGGGaagatcaatatctagatcaagatcaagatcaagatcaagatcaagatc < 4:281712/149‑1 (MQ=11) ccGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGTGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaag < 3:272727/149‑1 (MQ=17) cgcgCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGTCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaga < 7:197899/149‑1 (MQ=17) cgcgCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaa < 3:2556/123‑1 (MQ=32) cgcCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaag < 2:343862/116‑1 (MQ=32) cgcCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaag > 1:343862/1‑116 (MQ=32) gcCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatc > 3:181271/1‑148 (MQ=32) ctgaGGCCCCAGGA‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatc > 5:33722/4‑146 (MQ=255) gAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaga < 8:6108/149‑1 (MQ=33) gCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaag > 2:231708/1‑132 (MQ=32) gCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaag < 1:231708/132‑1 (MQ=32) ccccATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatc > 3:268744/1‑146 (MQ=35) cccATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaa > 4:140025/1‑117 (MQ=32) cccATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaa < 3:140025/117‑1 (MQ=32) cccATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagat > 1:138323/1‑108 (MQ=32) cccATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagat < 2:138323/108‑1 (MQ=32) cccATCC‑TGGGGCATCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaa < 1:124845/141‑1 (MQ=17) cccATCC‑TGGGGCATCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaa > 2:124845/1‑141 (MQ=17) cATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatc < 1:201606/149‑1 (MQ=40) aTCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcg < 4:181271/149‑1 (MQ=40) tCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgagatcaagat > 5:288742/1‑148 (MQ=255) gcgcTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgagatcaagatc > 6:80253/1‑146 (MQ=255) ggtGACGGGCATGGATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaga > 2:258863/3‑111 (MQ=12) ggtGACGGGCATGGATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaga < 1:258863/109‑1 (MQ=12) cTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTACTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgagatcaagatcaagatc < 7:123151/149‑1 (MQ=255) gtGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgagatcaagatcaagatcg < 4:2256/148‑1 (MQ=255) aCGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgagatcaagatcaagatc > 5:296999/1‑145 (MQ=255) ccATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAgc > 6:151465/1‑149 (MQ=255) cccGTCAACTGCCTTCGCAAGTCCTGCGATCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTgg < 5:329374/149‑1 (MQ=255) ccGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCACGAGCGCTggg > 2:278051/1‑149 (MQ=255) ccGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTggg < 8:251683/149‑1 (MQ=255) gTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGtt < 7:64962/149‑1 (MQ=255) tCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGttt < 5:151465/149‑1 (MQ=255) aCCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTg > 2:102664/1‑148 (MQ=255) aCCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGa < 6:203145/149‑1 (MQ=255) cTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgagatcaag > 1:146723/1‑115 (MQ=255) cTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgagatcaag < 2:146723/115‑1 (MQ=255) gCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGc > 5:340533/1‑149 (MQ=255) ccTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGcc < 5:80253/149‑1 (MQ=255) ccTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGc < 4:5827/148‑1 (MQ=255) cTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCg > 3:294724/1‑149 (MQ=255) cGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGt < 4:268744/147‑1 (MQ=255) gCATGGCCggagtgtggggaccccggagcgcagcgctggggccggatgatgggagcgcagcgttttttggttactttttgtcgcgtttgacaaaaagtgactcgccgtaagggccatccctttcaaggtcttttggttttggcggcttt < 6:49582‑M1/149‑142 (MQ=255) gCAAGGCCTGCGTTCGGCCTCCTGATGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGAGCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCAGAGCt > 4:59967/1‑149 (MQ=255) cAAGGCCggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttttttggttactttttgtcgcgtttgacaaaaagtgactagccgtaagggccatccctttcaaggtcttttggttttggcggcttt > 4:333840‑M1/1‑7 (MQ=255) cAAGGCCggagtgaggggaccccggagcgcagcgcaggggcagcatgatgggagcgcagcgttttttggttactttttgtcgcgtttgacaaaaagtgactcgccgtaagggcaatacctttcaaggtcttatggttttggcggcttt > 1:224420‑M1/1‑7 (MQ=255) cAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCtt < 6:296999/149‑1 (MQ=255) cAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCtt > 5:135851/1‑149 (MQ=255) aaGGCCggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttttttggttactttttgtcgcgtttgacaaaaagtgactcgccgtaagggccatccctttcaaggtcttttggttttggcggctttga < 7:262415‑M1/149‑144 (MQ=255) aaGGCCggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttttttggttactttttgtcgcgtttgacaaaaagtgactcgccgtaagggccatccctttcaaggtcttttggttttggcggctttga < 8:203229‑M1/149‑144 (MQ=255) aaGGCCggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttttttggttactttttgtcgcgtttgacaaaaa < 5:149608‑M1/94‑89 (MQ=255) aaGGCCggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttttttggttactttttgtcgcgtttgacaaaaa > 6:149608‑M1/1‑6 (MQ=255) aGGCCggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttttttggttactttttgtcgcgtttgacaaaaagtgactcgccgtaagggccatccctttcaaggtcttttggttttggcggctttgat < 4:33635‑M1/149‑145 (MQ=255) aGGCCTGCGTTCGGCCTCCTGATGTCGGGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTgg < 3:59967/149‑1 (MQ=255) ggCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGa < 6:135851/149‑1 (MQ=255) ccggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttttttggttactttttgtcgcgtttgacaaaaagtgactcgccgtaagggccatccctttcaaggtcttttggttttgcggctttgatgacc < 5:278865‑M1/149‑148 (MQ=255) ccggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttttttggttactttttgtcgcgtttgacaaaaagt < 7:106886‑M1/92‑91 (MQ=255) ccggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttttttggttactttttgtcgcgtttgacaaaaagt > 8:106886‑M1/1‑2 (MQ=255) cTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCAGTGcatatcgg > 5:266844/1‑141 (MQ=255) | GCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCC‑TGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACC > NC_002947/2414689‑2414976 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |