BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2465543	91 (1.720)	4 (0.080)	4/240	NT	5.3%	coding (95/1353 nt)	PP_2157	sensor histidine kinase
*	?	NC_002947	= 2465600	57 (1.140)	4 (0.080)	4/240	NT	5.3%	coding (38/1353 nt)	PP_2157	sensor histidine kinase

Only 100 of 111 total aligned reads displayed.

GCCTGGTGACTCAGTTCATCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGATC  >  NC_002947/2465396‑2465685

gCCTGGTGACTCAGTTCATCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCg                                                                                                                                               <  7:260836/149‑1 (MQ=255)

  cTGGTGACTCAGTTCATCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGc                                                                                                                                             >  7:312279/1‑149 (MQ=255)

     gTGACTCAGTTCATCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCt                                                                                                                                            <  8:282640/147‑1 (MQ=255)

     gTGACTCAGTTCATCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTg                                                                                                                                           >  8:260931/1‑148 (MQ=255)

       gACTCAGTTCATCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGaa                                                                                                                                         >  1:199121/1‑148 (MQ=255)

        aCTCAGTTCATCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAAca                                                                                                                                       <  2:311759/149‑1 (MQ=255)

          tCAGTTCATCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAAccg                                                                                                                                      >  7:303395/1‑146 (MQ=255)

           cAGTTCATCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAAcag                                                                                                                                      >  4:343296/1‑147 (MQ=255)

           cAGTTCATCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAAcag                                                                                                                                      >  4:157055/1‑147 (MQ=255)

            aGTTCATCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAAcagc                                                                                                                                     <  8:243415/147‑1 (MQ=255)

            aGTTCATCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAAcag                                                                                                                                      >  2:143596/1‑146 (MQ=255)

            aGTTCATCGCGCAGGGCCGGCAAGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAAcag                                                                                                                                      >  3:90364/1‑146 (MQ=255)

             gTTCATCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGa                                                                                                                                  >  3:155742/1‑149 (MQ=255)

             gTTCATCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGa                                                                                                                                  <  3:157055/149‑1 (MQ=255)

                cATCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAAcag                                                                                                                                      >  3:259620/1‑142 (MQ=255)

                cATCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAAcag                                                                                                                                      <  4:264279/142‑1 (MQ=255)

                 aTCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCgg                                                                                                                              >  3:193538/1‑149 (MQ=255)

                  tCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTTCTCGCTGGCCCGGCTGAACAGCAGACCGgc                                                                                                                             >  2:273605/1‑149 (MQ=255)

                     cgcAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCgg                                                                                                                                              <  1:75715/129‑1 (MQ=255)

                     cgcAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCgg                                                                                                                                              <  1:80593/129‑1 (MQ=255)

                     cgcAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCgg                                                                                                                                              >  2:80593/1‑129 (MQ=255)

                        aGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAg                                                                                                                       >  1:333458/1‑149 (MQ=255)

                         gggCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGc                                                                                                                      <  8:312279/149‑1 (MQ=255)

                          ggCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAAca                                                                                                                                       >  5:6614/1‑131 (MQ=255)

                          ggCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAAca                                                                                                                                       <  6:6614/131‑1 (MQ=255)

                            ccGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCgag                                                                                                                   <  1:143596/149‑1 (MQ=255)

                              ggCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCG‑AACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACg                                                                                                                >  8:43892/1‑149 (MQ=255)

                               gCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACg                                                                                                                <  2:2810/149‑1 (MQ=255)

                                cAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACgg                                                                                                               <  4:328995/149‑1 (MQ=255)

                                      ggCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCgg                                                                                                         <  8:275901/149‑1 (MQ=255)

                                        ccTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGTGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACggagattcg                                                                                                        >  1:16635/1‑141 (MQ=255)

                                        ccTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACg                                                                                                                <  7:256313/140‑1 (MQ=255)

                                        ccTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACg                                                                                                                >  8:256313/1‑140 (MQ=255)

                                           ggAGCTCATCAGCCGTGCTGCCGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAg                                                                                                    >  5:221894/1‑149 (MQ=255)

                                           ggAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGATGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTg                                                                                                       <  6:130651/146‑1 (MQ=255)

                                           ggAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGATGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTg                                                                                                       >  5:130651/1‑146 (MQ=255)

                                           ggAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAg                                                                                                    >  8:111284/1‑149 (MQ=255)

                                              gCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAggcg                                                                                                 <  7:111284/149‑1 (MQ=255)

                                                  atcaGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAggcgg                                                                                                <  6:51197/146‑1 (MQ=255)

                                                  atcaGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAggcgg                                                                                                >  5:51197/1‑146 (MQ=255)

                                                  atcaGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGgcggcg                                                                                              >  4:259428/1‑148 (MQ=255)

                                                  atcaGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGgcggcg                                                                                              >  6:89515/1‑148 (MQ=255)

                                                  atcaGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGgcggcg                                                                                              >  1:239220/1‑148 (MQ=255)

                                                   tcaGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGaa                                                                                            >  3:180439/1‑149 (MQ=255)

                                                      gCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAAcag                                                                                         <  4:193538/149‑1 (MQ=255)

                                                       ccGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGGGCAGGCGGCGAAcagc                                                                                        <  3:134391/149‑1 (MQ=255)

                                                        cGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCtgctgttcgccgcctgcaccgccaccgtctcgctgggcgccggtctgctgttcagcc                                                                                       >  2:157054‑M1/1‑92 (MQ=255)

                                                          tGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAgg                                                                                     >  2:199121‑M2/1‑147 (MQ=255)

                                                              gACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGt                                                                                                        >  6:104292/1‑126 (MQ=255)

                                                              gACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGt                                                                                                        <  5:104292/126‑1 (MQ=255)

                                                               aCGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCtgctgttcgccgcctgcaccgccaccgtctcgctgggcgccggtctgctgttcagccgggccag                                                                                <  6:71237‑M1/149‑65 (MQ=255)

                                                               aCGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCtgctgttcgccgcctgcaccgccaccgtctcgctgggcgccggtctgctgttcagccgggcca                                                                                 <  1:157054‑M1/148‑64 (MQ=255)

                                                                cGCCGGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGTTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAgg                                                                               >  5:165529/1‑149 (MQ=255)

                                                                   cagccagTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCga                                                                                                                    >  6:146166/1‑109 (MQ=255)

                                                                    agccagTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAggcggc                                                                           >  4:342256/1‑149 (MQ=255)

                                                                      ccagTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTg                                                                         >  2:196890/1‑149 (MQ=255)

                                                                         gTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGcc                                                                       >  5:309326/1‑148 (MQ=255)

                                                                            gCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAg                                                                    <  3:342256/148‑1 (MQ=255)

                                                                             cGTCCGAAACAATGCCAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAggg                                                                  <  1:70638/149‑1 (MQ=255)

                                                                                ccGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGaaa                                                               >  5:284193/1‑149 (MQ=255)

                                                                                 cGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGaaa                                                               <  2:239220/148‑1 (MQ=255)

                                                                                 cGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGaaa                                                               <  6:165529/148‑1 (MQ=255)

                                                                                  gAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCgg                                                                                                                              >  7:241434/1‑84 (MQ=255)

                                                                                  gAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCgg                                                                                                                              <  8:241434/84‑1 (MQ=255)

                                                                                   aaaCAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCAGAACAGCAGACCGGCGACCAGCGAGACGGTCGCAGTGCAGGCGGCGAACACCAGGGCCAGGAGGCTGCCGAGGGAAAccc                                                            >  3:24089/1‑149 (MQ=255)

                                                                                      cAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGCGCCAGGCGGCTGCCGAGGGAAACCCGgc                                                         <  1:196890/149‑1 (MQ=255)

                                                                                       aaTGACAGGCGCGAGTCCAGGTGTTGTTGGTGGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTTAAGAGCATACCGGCGCCCAGGGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGgcg                                                        <  4:90364/149‑1 (MQ=255)

                                                                                       aaTGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAAcagca                                                                                                                                    >  3:109557/1‑73 (MQ=255)

                                                                                       aaTGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAAcagca                                                                                                                                    <  4:109557/73‑1 (MQ=255)

                                                                                       aaTGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGgcg                                                        >  6:135536/1‑149 (MQ=255)

                                                                                         tGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCa                                                      <  5:135536/149‑1 (MQ=255)

                                                                                          gACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCAAGGCGGCTGCCGAGGGAAAc                                                              >  1:346672/1‑140 (MQ=255)

                                                                                                        cagcagTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGctc                                       <  4:180439/149‑1 (MQ=255)

                                                                                                        cagcagTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGctc                                       >  1:197569/1‑149 (MQ=255)

                                                                                                           cagTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTc                                    <  7:43892/149‑1 (MQ=255)

                                                                                                            agTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCg                                   <  2:333458/149‑1 (MQ=255)

                                                                                                              ttgttgGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAg                                 >  5:141962/1‑149 (MQ=255)

                                                                                                                gttgGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGt                                <  6:284193/148‑1 (MQ=255)

                                                                                                                gttgGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGt                                <  7:260931/148‑1 (MQ=255)

                                                                                                                 ttgGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGACCAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTAc                              <  8:107204/149‑1 (MQ=255)

                                                                                                                    gTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGc                                                                                                      >  8:311198/1‑74 (MQ=255)

                                                                                                                    gTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGt                            >  7:75870/1‑148 (MQ=255)

                                                                                                                          ttCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCAt                     <  5:89515/149‑1 (MQ=255)

                                                                                                                             gacgaAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGTCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGc                   <  1:273605/148‑1 (MQ=255)

                                                                                                                             gacgaAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCGATGcc                  >  4:237818/1‑149 (MQ=255)

                                                                                                                              acgaAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGACCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCcg                 >  7:159211/1‑149 (MQ=255)

                                                                                                                               cgaAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCcgc                >  5:16933/1‑149 (MQ=255)

                                                                                                                                       tgctCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGTGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGgtg        >  5:291488/1‑149 (MQ=255)

                                                                                                                                       tgctCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGgtg        >  7:24339/1‑149 (MQ=255)

                                                                                                                                        gctCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGgtgt       >  2:34341/1‑149 (MQ=255)

                                                                                                                                         ctCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGgtgt       <  6:16933/148‑1 (MQ=255)

                                                                                                                                         ctCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGgtgt       <  1:34341/148‑1 (MQ=255)

                                                                                                                                            tcTGGCCCGGCTGAACAGCAGAGCGGCGCCCAGCGAGACGGTGGCAGTTCATGCGGCGAACAGCAGGGCCTGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTGTTCGAGTACGTAACCCATGCCGCGGACGGTGTgg     <  4:24089/146‑1 (MQ=255)

                                                                                                                                             cTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAgggccagcgagcagcacttcgtcgaactcgaccaacaactgctggactcgcgcctgtcattgtttcggacgcaactggctggcgt  <  6:71237‑M2/149‑86 (MQ=255)

                                                                                                                                             cTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGt                                <  6:301618/119‑1 (MQ=255)

                                                                                                                                             cTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGt                                >  5:301618/1‑119 (MQ=255)

                                                                                                                                              tGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAgggccagcgagcagcacttcgtcgaactcgaccaacaactgctggactcgcgcctgtcattgtttcggacgcaactggctggcgt  <  1:157054‑M2/148‑86 (MQ=255)

                                                                                                                                                  ccGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTAc                              >  1:274137/1‑116 (MQ=255)

                                                                                                                                                  ccGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTAc                              <  2:274137/116‑1 (MQ=255)

                                                                                                                                                  ccGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGc                   <  2:325905/127‑1 (MQ=255)

GCCTGGTGACTCAGTTCATCGCGCAGGGCCGGCAGGCGGGCCTGGAGCTCATCAGCCGTGCTGACGCCAGCCAGTTGCGTCCGAAACAATGACAGGCGCGAGTCCAGCAGTTGTTGGTCGAGTTCGACGAAGTGCTGCTCGCTGGCCCGGCTGAACAGCAGACCGGCGCCCAGCGAGACGGTGGCGGTGCAGGCGGCGAACAGCAGGGCCAGGCGGCTGCCGAGGGAAACCCGGCGCATCACTCGGTGCGCTCTTCGAGTACGTAACCCATGCCGCGGACGGTGTGGATC  >  NC_002947/2465396‑2465685

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.