New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3636697 =	54 (1.020)	3 (0.060)	3/238	NT	5.8%	coding (625/1191 nt)	PP_3203	MFS transporter
	?	NC_002947	3636738 =	46 (0.930)					coding (666/1191 nt)	PP_3203	MFS transporter

TGGGGGAAAGCGACTGGCGGACACCGTTCACCCTCTATGCGGTGGGTGCGCTGTGCCTGCCCTTGATGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGTCAGGTCGGCCTGGCCATGGGCGCCAACCAGCTCGGC  >  NC_002947/3636551‑3636837                                                                                                                                                   |                                                                                                                                             ccggcaagcgcgccagtaagcgaaaagccagtgcaccggccaacacgccgagctggttggcgcccatggccaggccgacctgacggggcgcatctatgtgcagtaactgcagcacgtaaccggcctgtaccgggacgatgaacaggCt                                                                                                                                             <  1:140304‑M1/2‑1 (MQ=255)  cggcaagcgcgcctgtaagcgaaaagccagtgcaccggccaacacgccgagctggttggcgcccatggccaggccgacctgacggggcgcatctatgtgcagtaactgcagcacgtaaccggcctgtaccgggacgatgaacaggCTGa                                                                                                                                           >  5:277082‑M1/146‑149 (MQ=255)     ggAAAGCGACTGGCGGACACCGTTCACCCTCTATGCGGTGGGTGCGCTGTGCCTGCCCTTGATGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGc                                                                                                                                        >  4:290558/1‑149 (MQ=255)                 gCGGACACCGTTCACCCTCTATGCGGTGGTGGCGCTGTGCCTGACCTTGATTGCCCTGCTGTTGTTGGAGCCTCGTGACTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATTGGCGGACCTGACGCCGTTATACCTGc                                                                                                                            <  2:279868/149‑1 (MQ=255)                 gCGGACACCGTTCACCCTCTATGCGGTGGGTGCGCTGTGCCTGCCCTTGATGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTg                                                                                                                             <  2:72595/148‑1 (MQ=255)                 gCGGACACCGTTCACCCTCTATGCGGTGGGTGCGCTGTGCCTGCCCTTGATGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGc                                                                                                                            >  5:162418/1‑149 (MQ=255)                 gCGGACACCGTTCACCCTCTATGCGGTGGGAGCGCTGTGCCTGCCCTGGATGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGc                                                                                                                            <  2:283635/149‑1 (MQ=255)                    gACACCGTTCACCCTCTATGCGGTGGGTGCGCTGTGCCTGCCCTTGATGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATAcc                                                                                                                               >  5:149120/1‑143 (MQ=255)                    gACACCGTTCACCCTCTATGCGGTGGGTGCGCTGTGCCTGCCCTTGATGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATAcc                                                                                                                               <  6:149120/143‑1 (MQ=255)                                ccTCTATGCGGTGGGTGCGCTGTGCCTGCCCTTGATGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTgctggctg                                                                                                             >  4:199194/1‑149 (MQ=255)                                       gCGGTGGGTGCGCTGTGCCTGCCCTTGATGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCTCTGACGCCGTTATACCTGCTCACCGTGctggctggaccatc                                                                                                      >  8:148343/1‑143 (MQ=255)                                        ccaacacgccgagctggttggcgcccatggccaggccgacctgacggggcgcatctatgtgcagtaactgcagcacgtaaccggcctgtaccgggacgatgaacaggCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGc                                                                                                     >  7:267823‑M1/108‑149 (MQ=255)                                        cGGTGGGTGCGCTGTGCCTGCCCTTGATGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGc                                                                                                     <  2:127673/149‑1 (MQ=255)                                         ggtgggtgCGCTGTGCCTGCCCTTGATGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGcc                                                                                                    >  8:334837/1‑149 (MQ=255)                                          gtgggtgCGCTGTGCCTGCCCTTGATGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTgctg                                                                                                                 <  1:214192/135‑1 (MQ=255)                                          gtgggtgCGCTGTGCCTGCCCTTGATGGCACTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTgctg                                                                                                                 >  2:214192/1‑135 (MQ=255)                                                      tgcctgccCTTGATGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTccc                                                                                       <  7:334837/149‑1 (MQ=255)                                                        cctgccCTTGATGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCt                                                                                                                              >  5:14346/1‑108 (MQ=255)                                                        cctgccCTTGATGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCt                                                                                                                              <  6:14346/108‑1 (MQ=255)                                                        cctgccCTTGATGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGACGTCAGc                                                                                                     >  4:301732/1‑133 (MQ=255)                                                                  aTGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCg                                                                            <  6:162418/148‑1 (MQ=255)                                                                       ccTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACg                                                                      >  5:67699/1‑149 (MQ=255)                                                                            tgttgtGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCAGCGTCCCGGTACAGGCCGGTTACGtgctg                                                                 >  5:215405/1‑149 (MQ=255)                                                                              acctgacggggcgcatctatgtgcagtaactgcagcacgtaaccggcctgtaccgggacgatgaacaggCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGcc                                                                                                    <  4:133747‑M1/43‑1 (MQ=255)                                                                              acctgacggggcgcatctatgtgcagtaactgcagcacgtaaccggcctgtaccgggacgatgaacaggCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGcc                                                                                                    >  3:133747‑M1/70‑112 (MQ=255)                                                                                 tgGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGt                                                             >  7:291575/1‑148 (MQ=255)                                                                                   ggtgCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCTTCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTa                                                           <  2:255150/145‑1 (MQ=255)                                                                                   ggAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGtgctgc                                                                >  8:334009/1‑143 (MQ=255)                                                                                   ggAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGtgctgc                                                                <  7:334009/143‑1 (MQ=255)                                                                                     aGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCg                                                                                      >  4:207930/1‑119 (MQ=255)                                                                                      gCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGc                                                       <  3:290558/149‑1 (MQ=255)                                                                                         gcgTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCg                                                                            >  6:230618/1‑125 (MQ=255)                                                                                         gcgTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCg                                                                            <  5:230618/125‑1 (MQ=255)                                                                                          cgTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACAt                                                   <  8:291575/149‑1 (MQ=255)                                                                                               ctgccAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTa                                                           >  1:161115/1‑136 (MQ=255)                                                                                               ctgccAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTa                                                           <  2:161115/136‑1 (MQ=255)                                                                                               ctgccAGGCCACCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATg                                              >  8:112715/1‑149 (MQ=255)                                                                                                tgccAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATgc                                             <  3:199194/149‑1 (MQ=255)                                                                                                        cgccAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGCCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGt                                      >  1:161401/1‑148 (MQ=255)                                                                                                         gccAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGt                                      >  5:70174/1‑147 (MQ=255)                                                                                                                aaGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGTCAGGTCGGc                             >  3:102654/1‑149 (MQ=255)                                                                                                                   ccTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCACCCCGTCAGGTCGGCCTg                          >  5:290225/1‑149 (MQ=255)                                                                                                                     tCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGTCAGGTCGGCCTGGc                        >  3:221719/1‑149 (MQ=255)                                                                                                                       cGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGTCAGGTCGGCCTGGCCa                      <  4:102654/149‑1 (MQ=255)                                                                                                                        gTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGTCAGGTCGGCCTGGCCAt                     >  3:193707/1‑149 (MQ=255)                                                                                                                             ttCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGTCAGGTCGGCCTGGCCATGGgcg                >  1:316871/1‑149 (MQ=255)                                                                                                                                gcgTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGAGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGTCAGGTCGGCCTGGCCATGGGCGcc              >  3:239166/1‑148 (MQ=255)                                                                                                                                       ccATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGTCAGGTCGGCCTgg                         <  6:191703/130‑1 (MQ=255)                                                                                                                                       ccATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGTCAGGTCGGCCTgg                         >  5:191703/1‑130 (MQ=255)                                                                                                                                        cATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGTCAGGTCGGCCTg                          >  3:40192/1‑128 (MQ=255)                                                                                                                                        cATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGTCAGGTCGGCCTg                          <  4:40192/128‑1 (MQ=255)                                                                                                                                        cATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGTCAGGTCGGCCTGGCCATGGGCGCCAACCAGCTc     >  2:140304/1‑149 (MQ=255)                                                                                                                                        cATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCACCCCGTCAGGTCGGCCTGGCCATGGGCGCCAACCAGCTc     <  6:290225/149‑1 (MQ=255)                                                                                                                                          tGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGTCAGGTCGGCCTGGCCATGGGCGCCAACCAGCTCgg   >  5:263871/1‑149 (MQ=255)                                                                                                                                            ggcggcCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGTCAGGTCGGCCTGGCCATGGGCGCCAAc           >  7:208574/1‑139 (MQ=255)                                                                                                                                            ggcggcCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGTCAGGTCGGCCTGGCCATGGGCGCCAAc           <  8:208574/139‑1 (MQ=255)                                                                                                                                            ggcggcCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGTCAGGTCGGCCTGGCCATGGGCGCCAACCAGCTCGGc  <  6:263871/148‑1 (MQ=255)                                                                                                                                             gcggcCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGa                                                <  3:121840/101‑1 (MQ=255)                                                                                                                                             gcggcCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGa                                                >  4:121840/1‑101 (MQ=255)                                                                                                                                                   |                                                                                                                                             TGGGGGAAAGCGACTGGCGGACACCGTTCACCCTCTATGCGGTGGGTGCGCTGTGCCTGCCCTTGATGGCCCTGCTGTTGTGGGAGCCGCGTGCCTGCCAGGCCGCCAGCGAAGCCTCCGTCGATTCGCGTTTTCCATGGGCGGCCCTGACGCCGTTATACCTGCTCACCGTGCTGGCTGGCGTCAGCCTGTTCATCGTCCCGGTACAGGCCGGTTACGTGCTGCAGTTACTGCACATAGATGCGCCCCGTCAGGTCGGCCTGGCCATGGGCGCCAACCAGCTCGGC  >  NC_002947/3636551‑3636837

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.