New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3642402 | 50 (0.950) | 4 (0.080) | 4/244 | NT | 7.3% | coding (803/1431 nt) | PP_3209 | isoxanthopterin deaminase |
? | NC_002947 | = 3642441 | 53 (1.040) | coding (764/1431 nt) | PP_3209 | isoxanthopterin deaminase |
GGCCTCCATGGCAACGATATCTGCGATACCACTGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGCCGGCGCGCGGCGCGGGCGGTCTCGCGCAGGTGCTC > NC_002947/3642257‑3642550 | ggCCTCCATGGCAACGATATCTGCGATACCACTGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGa < 8:33952/149‑1 (MQ=255) tCCATGGCAACGATATCTGCGATACCACTGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCa > 3:104709/1‑149 (MQ=255) cATGGCAACGATATCTGCGATACCACTGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCAtt > 6:267871/1‑149 (MQ=255) cATGGCAACGATATCTGCGATACCACTGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCAt < 8:43173/148‑1 (MQ=255) aTGGCAACGATATCTGCGATACCACTGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTc < 7:251109/149‑1 (MQ=255) cGATATCTGCGATACCACTGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTcc < 1:199412/149‑1 (MQ=255) cGATACCACTGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCa < 3:275495/145‑1 (MQ=255) gATACCACTGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAaca > 1:150412/1‑149 (MQ=255) tACCACTGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAAcacc < 5:267871/149‑1 (MQ=255) aCTGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACgg > 3:308066/1‑149 (MQ=255) tGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCcg > 6:39258/1‑132 (MQ=255) ccAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGc < 4:308066/147‑1 (MQ=255) ccAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCga < 1:137626/149‑1 (MQ=255) aaGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCtctcgcccgtggtgttctgcgcggagcaggaatggctcg > 8:96455‑M1/1‑110 (MQ=255) cGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCtctcgcccgtggtgttctgcgcggagcaggaatggctcgggcc < 7:96455‑M1/149‑44 (MQ=255) cGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAggcc < 3:17659‑M2/149‑5 (MQ=255) gCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGt < 2:150412/149‑1 (MQ=255) cATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCtctcgcccgtggtgttctgcgcggagcaggaatggctcgggccggac > 4:283641‑M1/1‑102 (MQ=255) cATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCtctcgcccgtggtgttctgcgcggagcaggaatggctcgggccggac < 3:283641‑M1/149‑48 (MQ=255) gtgGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTGCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCAGACGTACGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATg < 5:248830/148‑1 (MQ=255) tGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGtt > 7:177530/1‑149 (MQ=255) gCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGAGTTCGTTCTg > 2:281858/1‑149 (MQ=255) gCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTg > 1:101977/1‑149 (MQ=255) gCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTg < 3:289166/149‑1 (MQ=255) gCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTg < 4:17659/149‑1 (MQ=255) cGATGCCGGTGCCGGTGGCGCCCAGCAGCTTGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTgg < 2:54447/149‑1 (MQ=255) cGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTgg < 2:101977/149‑1 (MQ=255) cggtgccggtgGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTc > 7:557/1‑85 (MQ=255) cggtgccggtgGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTc < 8:557/85‑1 (MQ=255) cggtgccggtgGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTACTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTcc < 8:325779/149‑1 (MQ=255) gcCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATc > 7:329262/1‑114 (MQ=255) gcCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATc < 8:329262/114‑1 (MQ=255) cttgATTTCTGCGGCGCGCAGCTTGACCATGTGCGCGAACCACACGTCCGGCCCTAGCCATTCCTGCTCCGCGCAGAACACCACTGGCGAGAGGCCGTGGCGATCATTTACTTCGTTCTGGTACTCCACTGTTTCGCTCAAATGGCtgt < 8:195645/146‑1 (MQ=255) ggATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCtgtg > 4:233612/1‑148 (MQ=255) tttCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACAAGACCGGCCCGAGCAATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGATCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAgg > 5:137090/1‑149 (MQ=255) cGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCgg < 2:227634/146‑1 (MQ=255) gcTCAGCTTTAGGAGGTGGGCGAACCACACTTCCGGCCGGTGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTGTGGTACTCCACGGTTTCGCTCAAATGGGTGTGCTGGCGTATGCGCa < 6:137090/149‑1 (MQ=255) gcTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGcc > 2:62917/1‑147 (MQ=255) gcTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCa < 3:233612/149‑1 (MQ=255) tCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGc > 1:129334/1‑149 (MQ=255) tCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGc > 2:153683/1‑149 (MQ=255) tCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGc > 3:110526/1‑149 (MQ=255) cTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGCcggc > 7:265673/1‑149 (MQ=255) ggTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGCcggcgcgc > 3:322099/1‑145 (MQ=255) ggTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGCcggcgcgc < 4:322099/145‑1 (MQ=255) gcgcGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGTCGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGCCGGCGcgcggcgcgg < 1:281858/149‑1 (MQ=255) gcgAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGCCGGCGCGCGGCgcgggc > 5:208474/1‑149 (MQ=255) gAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGCCGGCGCGCGGCgcgggcgg < 4:110526/149‑1 (MQ=255) cacaCGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGCCGGCGCGCGGCGCGGGCGGtctc > 7:25092/1‑149 (MQ=255) cacaCGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGCCGGCGCGCGGCGCGGGCGGtctc < 2:129334/149‑1 (MQ=255) acGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGCCGGCGCGCGGCGCGGGCGGtc < 4:286212/144‑1 (MQ=255) acGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGCCGGCGCGCGGCGCGGGCGGTCTcgcg > 4:346896/1‑149 (MQ=255) acGTCAGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGCCGGCGCGCGGCGCGGGCGGtc > 3:286212/1‑144 (MQ=255) gTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAggccggacgtgtggttcgcgcacctggtcaagctgagcgccgaagaaatccagctgctgggcgccaccggcaccggcatcgcccactgcccacaaagcaatg > 4:283641‑M2/1‑47 (MQ=255) gTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAggccggacgtgtggttcgcgcacctggtcaagctgagcgccgaagaaatccagctgctgggcgccaccggcaccggcatcgcccactgcccacaaagcaatg < 3:283641‑M2/149‑103 (MQ=255) gTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGCCGGCGCGCGGCGCGGGCGGTCTcgcg > 5:256556/1‑147 (MQ=255) ccGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGc > 8:66161/1‑114 (MQ=255) ccGCCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGc < 7:66161/114‑1 (MQ=255) ggCCtctcgcccgtggtgttctgcgcggagcaggaatggctcgggccggacgtgtggttcgcgcacctggtcaagctgagcgccgaagaaatccagctgctgggcgccaccggcaccggcatcgcccactgcccacaaagcaatggccg < 3:17659‑M1/149‑146 (MQ=255) ggCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAggccggacgtgtggttcgcgcacctggtcaagctgagcgccgaagaaatccagctgctgggcgccaccggcaccggcatcgcccactgcccacaaagcaatggccg < 7:96455‑M2/149‑107 (MQ=255) ccGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGCCGGCGCGCGGCGCGGGCGGTCTCGCGCAGGTGCTc < 6:256556/149‑1 (MQ=255) | GGCCTCCATGGCAACGATATCTGCGATACCACTGCCAAGCCGGCCATTGCTTTGTGGGCAGTGGGCGATGCCGGTGCCGGTGGCGCCCAGCAGCTGGATTTCTTCGGCGCTCAGCTTGACCAGGTGCGCGAACCACACGTCCGGCCCGAGCCATTCCTGCTCCGCGCAGAACACCACGGGCGAGAGGCCGTGGCGATCATGGACTTCGTTCTGGTACTCCACGGTTTCGCTCAAATGGCTGTGCAGGCGGATGCCCAGCCGGCGCGCGGCGCGGGCGGTCTCGCGCAGGTGCTC > NC_002947/3642257‑3642550 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |