New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5446532 = | 48 (0.910) | 4 (0.080) | 3/246 | NT | 7.2% | coding (37/1284 nt) | hemL | glutamate‑1‑semialdehyde 2,1‑aminomutase |
? | NC_002947 | 5446572 = | 56 (1.090) | coding (77/1284 nt) | hemL | glutamate‑1‑semialdehyde 2,1‑aminomutase |
ACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGAAGTCACCCGCCGCGCCCGCGCCTTCAACGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACAAACGCTACGTCGACTACGTCGGCTCGTGGGGCCC > NC_002947/5446385‑5446677 | ccgagtccagcacgtccgggtggccgtggccgaggatcatcgggccccacgagccgacgtagtcgacgtagcgtttgtcgtcctcgtcaacgacataggcgccttcggcatgcttgaagaacagcggcgtgccgccaacgctcttgaaa > 4:301825‑M1/148‑149 (MQ=255) aCCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGAAGTCACCCGCCGCGCCCGCGCCTTCAACGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGaa < 7:312027/149‑1 (MQ=255) gagtccagcacgtccgggtggccgtggccgaggatcatcgggccccacgagccgacgtagtcgacgtagcgtttgtcgtcctcgtcaacgacataggcgccttcggcatgcttgaagaacagcggcgagccgccaacgctcttgaAAGc < 7:12270‑M1/4‑1 (MQ=255) ggTGATCCACGGCTTGATCGGTGCCGCCAGCGCGCAGGAAGTCAACCGCCGCGCCCGCGCCTTCAACGCCTTGTTCGCAACCTGATACGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTACGCCCACGCCCAGAACCACCACCCt > 8:80334/1‑149 (MQ=255) gATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGAAGTCACCCGCCGCGCCCGCGCCTTCAACGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGc > 2:338027/1‑149 (MQ=255) cACGGCTTGTTCGGTGCCGACAGCGCGCAGGAAGTCACCCGCCGCGCCCGCGCCTTCAACGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGgtg > 2:70153/1‑149 (MQ=255) cTTGTTCGGTGCCGACAGCGCGCAGGAAGTCACCCGCCGCGCCCGCGCCTTCAACGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTc < 6:85747/146‑1 (MQ=255) cTTGTTCGGTGCCGACAGCGCGCAGGAAGTCACCCGCCGCGCCCGCGCCTTCAACGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTc > 5:85747/1‑146 (MQ=255) ttCGGTGCCGACAGCGCGCAGGAAGTCACCCGCCGCGCCCGCGCCTTCAACGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGc < 1:69445/149‑1 (MQ=255) cgcgcAGGAAGTCACCCGCCGCGCCCGCGCCTTCAACGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTc < 8:94310/149‑1 (MQ=255) gggccccacgagccgacgtagtcgacgtagcgtttgtcgtcctcgtcaacgacataggcgccttcggcatgcttgaagaacagcggcgtgccgccaacgctcttgaAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTc > 8:309263‑M1/107‑148 (MQ=255) ccccacgagccgacgtagtcgacgtagcgtttgtcctcctcgtcaacgacataggcgccttcggcatgcttgaagaacagcggcgtgccgccaacgctcttgaAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAaga > 3:74239‑M1/104‑149 (MQ=255) gAAGTCACCCGCCGCGCCCGCGCCTTCAACGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCg > 3:54200/1‑149 (MQ=255) tCACCCGCCGCGCCCGCGCCTTCAACGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGc > 6:221307/1‑124 (MQ=255) tCACCCGCCGCGCCCGCGCCTTCAACGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGc < 5:221307/124‑1 (MQ=255) aCCCGCCGCGCCCGCGCCTTCAACGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTggcg > 1:349566/1‑149 (MQ=255) cccGCCGCGCCCGCGCCTTCAACGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTggcgg > 7:149274/1‑149 (MQ=255) ccgccgCGCCCGCGCCTTCAACGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTggcggc > 4:84590/1‑149 (MQ=255) gccgcGCCCGCGCCTTCAACGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTGAGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCAc > 1:104157/1‑149 (MQ=255) cAACGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCaa < 1:272865/148‑1 (MQ=255) caCGCCTCGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGATCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCaa < 4:263495/146‑1 (MQ=255) aaCGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGc < 3:84590/149‑1 (MQ=255) gCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAg > 2:317585/1‑73 (MQ=255) gCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAg > 2:312598/1‑73 (MQ=255) tCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAgg > 5:82578/1‑149 (MQ=255) tcaacgacataggcgccttcggcatgcttgaagaacagcggcgtgccgccaacgctcttgaAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAaga < 6:189192‑M1/46‑1 (MQ=255) tcaacgacataggcgccttcggcatgcttgaagaacagcggcgtgccgccaacgctcttgaAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAaga > 5:189192‑M1/62‑107 (MQ=255) gCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGgcg > 3:240141/1‑149 (MQ=255) tCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTg > 8:58702/1‑124 (MQ=255) tCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTg < 7:58702/124‑1 (MQ=255) gagagaTACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGTAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCggt < 2:286199/148‑3 (MQ=255) gagagaTACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCGCATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGtt > 5:109528/1‑148 (MQ=255) gagagaTACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGtt < 6:62609/148‑1 (MQ=255) gagagaTACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGtt > 7:125927/1‑148 (MQ=255) agagaTACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGa > 4:188870/1‑149 (MQ=255) agaTACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACg < 6:82578/149‑1 (MQ=255) gaTACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCGCATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGa < 6:109528/149‑1 (MQ=255) gaTACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGa < 3:188870/149‑1 (MQ=255) tACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATACCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGGCGTTGACGAg > 7:68561/1‑148 (MQ=255) aCTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGga > 4:97898/1‑149 (MQ=255) ttCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGgacg > 6:275677/1‑149 (MQ=255) ttCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGgac > 2:316127/1‑148 (MQ=255) ttCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGgac > 3:312361/1‑148 (MQ=255) cATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGgcg > 1:154725/1‑125 (MQ=255) cATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGgcg < 2:154725/125‑1 (MQ=255) aTGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACaa < 1:338027/149‑1 (MQ=255) tGTCCCGTTCCGAAGCCATGTTCGCCCAAGCCCAGAAGAACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACaaa < 8:68561/149‑1 (MQ=255) cGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACAAACGCTACGTCg < 2:349566/149‑1 (MQ=255) aaGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACAAACGCTACGTCGAc < 8:125927/149‑1 (MQ=255) cccTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACAAACGCTACGTCGACTAc < 4:312361/149‑1 (MQ=255) cTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTACAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACAAACGCTACGTCGACTACGt > 2:268762/1‑149 (MQ=255) ccAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACAAACGCTACGTCGACTACGTCGGCTCGt < 1:316127/149‑1 (MQ=255) ccAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACAAACGCTACGTCGACTACGTCGGCTCGt > 3:196702/1‑149 (MQ=255) ccAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACAAACGCTACGTCGACTACGTCGGCTCGt > 4:24821/1‑149 (MQ=255) cAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACAAACGCTACGTCGACTACGTCGGCTCGTg < 1:70153/149‑1 (MQ=255) aaGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACAAACGCTACGTCGACTACGTCGGCTCGTgg > 6:7140/1‑149 (MQ=255) aGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACAAACGCTACGTCGACTAAGTCGGCTCGTggg > 2:55806/1‑149 (MQ=255) cAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACAAACGCTACGTCGACTACGTCGGCTCGTGGGGccc > 6:17883/1‑149 (MQ=255) aGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACAAACGCTACGTCGACTACGTCGGCTCGTggg < 7:209925/144‑1 (MQ=255) aGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACAAACGCTACGTCGACTACGTCGGCTCGTggg > 8:209925/1‑144 (MQ=255) aGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACAAACGCTACGTCGACTACGTCGGCTCGTGGGGccc > 5:283990/1‑148 (MQ=255) | ACCTGCTGGCGGTGATCCACGGCTTGTTCGGTGCCGACAGCGCGCAGGAAGTCACCCGCCGCGCCCGCGCCTTCAACGCCTTGTTCGCATCCTGATTCGAGAGATACTTCCATGTCCCGTTCCGAAGCCCTGTTCGCCCAAGCCCAGAAGCACATCCCTGGCGGTGTCAACTCGCCGGTCCGCGCTTTCAAGAGCGTTGGCGGCACGCCGCTGTTCTTCAAGCATGCCGAAGGCGCCTATGTCGTTGACGAGGACGACAAACGCTACGTCGACTACGTCGGCTCGTGGGGCCC > NC_002947/5446385‑5446677 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |