New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 600379065 (1.230)4 (0.080) 4/248 NT 6.2% coding (147/1491 nt) amaB L‑piperidine‑6‑carboxylate dehydrogenase
?NC_002947 = 6003845 58 (1.120)coding (92/1491 nt) amaB L‑piperidine‑6‑carboxylate dehydrogenase

GGCCTTCCTGGGTGATCTTGCCGGCTTCGATCGAGACCAGCTCGCCGAGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTCGGCGGCAACGCCAAGGCGCTCGAGCAATCCAGCAACCATTT  >  NC_002947/6003642‑6003938
                                                                                                                                                    |                                                                                                                                                     
ggCCTTCCTGGGTGATCTTGCCGGCTTCGATCGAGACCAGCTCGCCGAGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCC                                                                                                                                                       <  8:59894‑M1/149‑1 (MQ=255)
            tGATCTTGCCGGCTTCGATCGAGACCAGCTCGCCGAGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCgg                                                                                                                                          <  6:332260/149‑1 (MQ=255)
                       gCTTCGATCGAGACCAGCTCGCCGAGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGtctc                                                                                                                               <  6:300520/149‑1 (MQ=255)
                            gatcgaGACCAGCTCGCCGAGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCt                                                                                                                          >  7:183498/1‑149 (MQ=255)
                             atcgaGACCAGCTCGCCGAGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGCACAGGCGCACCAGTTCGCAACGGCGCGGAGCCGGCCCACTGCGCCAGGCTTCGAAGGCGCGCTGGGGCTGATCGATGCGGGCGATGGTCTCGGCCtt                                                                                                                         >  6:199827/1‑149 (MQ=255)
                             atcgaGACCAGCTCGCCGAGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCagatcgcctcggtgaaactgctcggcaag                                                                                                                          >  3:309594‑M1/1‑120 (MQ=255)
                                  gaCCAGCTCGCCGAGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGa                                                                                                                    <  7:225689/149‑1 (MQ=255)
                                  gaCCAGCTCGCCGAGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGa                                                                                                                    <  7:176655/149‑1 (MQ=255)
                                     cAGCTCGCCGAGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTAGCCGAg                                                                                                                   >  4:12995/1‑147 (MQ=255)
                                     cAGCTCGCCGAGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCAAGGCCGAgac                                                                                                                 <  8:50427/149‑3 (MQ=255)
                                     cAGCTCGCCGAGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGATCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAg                                                                                                                   >  2:316233/1‑147 (MQ=255)
                                      aGCTCGCCGAGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAg                                                                                                                >  1:326502/1‑149 (MQ=255)
                                           gCCGAGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCa                                                                                                           >  5:87279/1‑149 (MQ=255)
                                             cGAGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGttcacc                                                                                                          >  1:83237/1‑144 (MQ=255)
                                               aGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGt                                                                                                               >  1:154022/1‑141 (MQ=255)
                                               aGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGt                                                                                                               <  2:154022/141‑1 (MQ=255)
                                                ggTCGGCCTTGTGCTCACGCAGCACTTCGTCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCCGATGCGGGCGATGGTCTCGGCCTTGCCGAGc                                                                                                                  <  1:36850/138‑1 (MQ=255)
                                                ggTCGGCCTTGTGCTCACGCAGCACTTCGTCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGc                                                                                                                  >  2:36850/1‑137 (MQ=255)
                                                     gCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGAt                                                                                                                                     <  4:312520/113‑1 (MQ=255)
                                                     gCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGAt                                                                                                                                     >  3:312520/1‑113 (MQ=255)
                                                        ttGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCtt                                                                                                                         >  2:185031/1‑122 (MQ=255)
                                                        ttGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCtt                                                                                                                         <  1:185031/122‑1 (MQ=255)
                                                        ttGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGa                                                                                                                    <  4:70991/127‑1 (MQ=255)
                                                        ttGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGa                                                                                                                    >  3:70991/1‑127 (MQ=255)
                                                          gtgCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCg                                                                                                                     <  3:182239/124‑1 (MQ=255)
                                                          gtgCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCg                                                                                                                     >  4:182239/1‑124 (MQ=255)
                                                           tgCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCagatcgcctcggtgaaactgctcggcaaggccgagaccatcgcccgcatcgatcaggcc                                                                                            <  4:309594‑M1/149‑60 (MQ=255)
                                                              tCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGcc                                                                                        >  2:31520/1‑149 (MQ=255)
                                                                 cGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCCCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTc                                                                                     <  5:332863/149‑1 (MQ=255)
                                                                  gcagcaCTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTc                                                                                     >  4:142146/1‑148 (MQ=255)
                                                                    agcaCTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGCTCTGGCTGCCGTCGAt                                                                                  >  8:112160/1‑149 (MQ=255)
                                                                        cTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGc                                                                              >  8:4246/1‑149 (MQ=255)
                                                                         ttCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCg                                                                             >  5:291596/1‑149 (MQ=255)
                                                                         ttCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCg                                                                             >  2:16594/1‑149 (MQ=255)
                                                                            gCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCgtgt                                                                          <  2:83237/148‑1 (MQ=255)
                                                                                 aCAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACa                                                                     <  8:183498/149‑1 (MQ=255)
                                                                                    ggCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAggg                                                                  <  1:316233/149‑1 (MQ=255)
                                                                                     gcgcACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAggg                                                                  >  8:194475/1‑148 (MQ=255)
                                                                                       gcACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGc                                                                                                                            <  5:334065/88‑1 (MQ=255)
                                                                                       gcACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGc                                                                                                                            >  6:334065/1‑88 (MQ=255)
                                                                                           cAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGc                                                           >  3:178759/1‑149 (MQ=255)
                                                                                             gTTCGTCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGccc                                                         >  2:274388/1‑149 (MQ=255)
                                                                                             gTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCgtgt                                                                          >  5:288955/1‑132 (MQ=255)
                                                                                             gTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCgtgt                                                                          <  6:288955/132‑1 (MQ=255)
                                                                                              ttCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCg                                                                                                                                       <  8:228898/70‑1 (MQ=255)
                                                                                              ttCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCg                                                                                                                                       >  7:228898/1‑70 (MQ=255)
                                                                                                 gCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTgg                                                      <  6:87279/148‑1 (MQ=255)
                                                                                                 gCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTgg                                                      <  3:54780/148‑1 (MQ=255)
                                                                                                 gCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTgg                                                      <  7:4246/148‑1 (MQ=255)
                                                                                                  ccACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGgt                                                    >  4:304148/1‑149 (MQ=255)
                                                                                                        cgcgGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGAGTGAACAGGGTAGTCGCCCTGGGTGTAAGc                                              <  1:31520/149‑1 (MQ=255)
                                                                                                             aGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTcgg                                         <  7:194475/149‑1 (MQ=255)
                                                                                                              gCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCagatcgcctcggtgaaactgctcggcaaggccgagaccatcgcccgcatcgatcaggc                                                                                             >  6:106167‑M1/1‑39 (MQ=255)
                                                                                                              gCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCagatcgcctcggtgaaactgctcggcaaggccgagaccatcgcccgcatcgatcaggc                                                                                             <  5:106167‑M1/97‑59 (MQ=255)
                                                                                                                  gCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAggg                                                                  <  7:163655/119‑1 (MQ=255)
                                                                                                                  gCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAggg                                                                  >  8:163655/1‑119 (MQ=255)
                                                                                                                  gCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTCggcggc                                     >  1:84277/1‑148 (MQ=255)
                                                                                                                      acTGCGACAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGAAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGACCTGGGTGTAAGCCTCGGCGGCAACg                                 >  7:177887/1‑148 (MQ=255)
                                                                                                                       cTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTCGGCGGCAACGcc                               <  3:142146/149‑1 (MQ=255)
                                                                                                                           gcCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTa                                                 >  1:231145/1‑127 (MQ=255)
                                                                                                                           gcCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTa                                                 <  2:231145/127‑1 (MQ=255)
                                                                                                                           gcCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTCGGCGGCAACGCCAAgg                           >  2:105357/1‑149 (MQ=255)
                                                                                                                            ccAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTCGGCGGCAACGCCAAGgc                          >  5:6239/1‑149 (MQ=255)
                                                                                                                            ccAGGCTTCGAAGGCGCTCTGGGCCTGAGCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTCGGCGGCAACGCCAAGgc                          <  5:199827/149‑1 (MQ=255)
                                                                                                                                gCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTCGGCGGCAACGCCAAGGCGCTc                      <  3:304148/149‑1 (MQ=255)
                                                                                                                                  ttCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTCGGCGGCAACGCCAAGGCGCTCGa                    <  6:6239/149‑1 (MQ=255)
                                                                                                                                   tCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTCGGCGGCAACGCCAAGGCGCTCGAg                   >  1:39542/1‑149 (MQ=255)
                                                                                                                                    cGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTAGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTCGGCGGCAACGCCAAGGCGCTCGAg                   <  3:12995/148‑1 (MQ=255)
                                                                                                                                          cgcTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTCGGCGGCAACGCCAAGGCGCTCGAGCAATc              >  5:253036/1‑147 (MQ=255)
                                                                                                                                             tctAGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTCGGCGGCAACGCCAAGGCGCTCGAGCAATCCAGc          >  1:117855/1‑148 (MQ=255)
                                                                                                                                                 ggCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTggcccagagcgccttcgaagcctggcgcagtgtgccggctccgcgccgtggcgaactggtgcgcctgttcggcgaagtgctgcgtgagca     <  4:309594‑M2/149‑91 (MQ=255)
                                                                                                                                                  gCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTggcccagagcgccttcgaagcctggcgcagtgtgccggc                                                        >  6:106167‑M2/1‑58 (MQ=255)
                                                                                                                                                  gCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTggcccagagcgccttcgaagcctggcgcagtgtgccggc                                                        <  5:106167‑M2/97‑40 (MQ=255)
                                                                                                                                                    cTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTCGGCGGCAACGCCAAGGCGCTCGAGCAAt               <  7:191955/136‑1 (MQ=255)
                                                                                                                                                    cTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTCGGCGGCAACGCCAAGGCGCTCGAGCAAt               >  8:191955/1‑136 (MQ=255)
                                                                                                                                                    cTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTCGGCGGCAACGCCAAGGCGCTCGAGCAATCCAGCAACCAttt  >  6:329041/1‑149 (MQ=255)
                                                                                                                                                    cTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTCGGCGGCAACGCCAAGGCGCTCGAGCAATCCAGCAACCAttt  >  8:121180/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GGCCTTCCTGGGTGATCTTGCCGGCTTCGATCGAGACCAGCTCGCCGAGGTCGGCCTTGTGCTCACGCAGCACTTCGCCGAACAGGCGCACCAGTTCGCCACGGCGCGGAGCCGGCACACTGCGCCAGGCTTCGAAGGCGCTCTGGGCCTGATCGATGCGGGCGATGGTCTCGGCCTTGCCGAGCAGTTTCACCGAGGCGATCTGGCTGCCGTCGATCGGCGTGTGAACAGGGTAGTCGCCCTGGGTGTAAGCCTCGGCGGCAACGCCAAGGCGCTCGAGCAATCCAGCAACCATTT  >  NC_002947/6003642‑6003938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.