New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 154750 = | 57 (1.080) | 4 (0.080) | 4/244 | NT | 7.4% | coding (546/1659 nt) | yjbB | Na+/Pi‑cotransporter |
? | NC_002947 | 154792 = | 46 (0.910) | coding (504/1659 nt) | yjbB | Na+/Pi‑cotransporter |
TTGGCGCCGACCACCAGCCCGATGGCGACCGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGCCCGATGCCCACCCGGCCCAGTTGGCCGGCCCGTGTCTGCTTGCGCGAAAG > NC_002947/154646‑154938 | ttGGCGCCGACCACCAGCCCGATGGCGACCGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGt < 6:6178/149‑1 (MQ=255) catcgggcttggcctgatcatcctggcactcgaacttatcgtgcaggcagcggcgccgatcacccaagcccaaggcgtgaaagtgctgtttgcctcactgaccGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGt < 3:203118‑M1/45‑1 (MQ=255) ggCGCCGACCACCAGCCCGATGGCGACCGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTc < 8:20967/148‑1 (MQ=255) gcgcCGACCACCAGCCCGATGGCGACCGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCa < 7:136515/148‑1 (MQ=255) cgcCGACCACCAGCCCGATGGCGACCGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGt > 7:215763/1‑149 (MQ=255) gggcttggcctgatcatcctggcactcgaacttatcgtgcaggcagcggcgccgatcacccaagcccaaggcgtgaaagtgctgtttgcctcactgaccGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGt > 4:203118‑M1/100‑148 (MQ=255) gcCGACCACCAGCCCGATGGCGACCGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTg < 3:330141/149‑1 (MQ=255) ccaccaGCCCGATGGCGACCGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGt > 5:25196/1‑143 (MQ=255) ccaccaGCCCGATGGCGACCGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGt < 6:25196/143‑1 (MQ=255) caccaGCCCGATGGCGACCGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCa > 1:197657/1‑148 (MQ=255) ccaGCCCGATGGCGACCGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCaaa > 2:58405/1‑148 (MQ=255) ccaGCCCGATGGCGACCGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCaaa > 6:241485/1‑148 (MQ=255) gCCCGATGGCGACCGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAg > 7:79327/1‑148 (MQ=255) gATGGCGACCGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACtt > 6:168600/1‑149 (MQ=255) gATGGCGACCGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACtt < 8:215763/149‑1 (MQ=255) atcctggcactcgaacttatcgtgcaggcagcggcgccgatcacccaagcccaaggcgtgaaagtgctgtttgcctcactgaccGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCa < 2:31549‑M1/47‑1 (MQ=255) atcctggcactcgaacttatcgtgcaggcagcggcgccgatcacccaagcccaaggcgtgaaagtgctgtttgcctcactgaccGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCa > 1:31549‑M1/85‑131 (MQ=255) aTGGCGACCGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACttt < 8:79327/149‑1 (MQ=255) gCGACCGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCa < 8:126572/148‑1 (MQ=255) ccGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGc > 5:13415/1‑137 (MQ=255) ccGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGc < 6:13415/137‑1 (MQ=255) cGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCctt < 2:197657/149‑1 (MQ=255) gCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCcttgg < 5:168600/149‑1 (MQ=255) cTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCcttgggcttg < 5:251331/149‑1 (MQ=255) ttCAGTTCGGCGCCGGCGAGTGTCGCTGTTAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCGGAGCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAgg < 6:199638/117‑1 (MQ=255) aTCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGTAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCcttgggcttgg < 4:137924/147‑1 (MQ=255) aTCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCcttgggcttgg < 1:58405/147‑1 (MQ=255) aTCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGt < 3:274354/149‑1 (MQ=255) aTCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGt > 4:274354/1‑149 (MQ=255) aTCAGTTCGGCCCCGGCCAGTCTCGCTGTGAGCAGAACGGCGCCCAGGCTGGAATAGGAAATCATGGCGAACATTACCCAGACCAGAGCGTCGATCATGATGTCGCCGGTCAGTGAgg > 5:199638/1‑118 (MQ=255) gTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGcc > 6:349470/1‑133 (MQ=255) gTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATc > 6:255170/1‑149 (MQ=255) cAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGctgcct > 7:124689/1‑149 (MQ=255) cAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCACAGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGctgcct > 4:117762/1‑149 (MQ=255) cgCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTGGAGCATGATGTCGCCGGTCAGTGAGGCAATCAGCACTTTCACGCGTTTGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTc < 5:287302/148‑1 (MQ=255) aGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTc < 5:255170/149‑1 (MQ=255) gCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCg > 7:84830/1‑149 (MQ=255) cAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGa < 8:124689/149‑1 (MQ=255) aaCGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTg > 5:185550/1‑149 (MQ=255) tGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTAGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAgg < 8:245882/149‑1 (MQ=255) gAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGTAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGccc > 2:78737/1‑149 (MQ=255) gAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGccc > 2:257917/1‑149 (MQ=255) actgaccggcgacatcatgctcgacgctctggtcggggcaatgttcgccGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGccc > 4:203118‑M2/50‑148 (MQ=255) tgaccggcgacatcatgctcgacgctctggtcggggcaatgttcgccGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGgat < 2:31549‑M2/84‑1 (MQ=255) tgaccggcgacatcatgctcgacgctctggtcggggcaatgttcgccGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGgat > 1:31549‑M2/48‑131 (MQ=255) accggcgacatcatgctcgacgctctggtcggggcaatgttcgccGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGCCCGATg < 3:203118‑M2/103‑1 (MQ=255) GCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGCCCGATGCCCAc < 4:285803‑M1/149‑1 (MQ=255) aTTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGgat > 4:78202/1‑119 (MQ=255) ccGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGgat < 7:83016/113‑1 (MQ=255) ccGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGgat > 8:83016/1‑113 (MQ=255) agagCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGCCCGATGCCCACCCGGCCCAGTTggccggc < 5:241485/149‑1 (MQ=255) gagCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGCCCGATGCCCACCCGGCCAACTGggccgggt < 1:257917/149‑3 (MQ=255) gCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGgat < 6:249349/104‑1 (MQ=255) cGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGCCCGATGCCCACCCGGCCCAGTTGGCCGGCCCgt < 6:185550/149‑1 (MQ=255) cGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGCCCGATGCCCACCCGGCCCAGTTGGCCGGCCCgt < 3:285803/149‑1 (MQ=255) gAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGCCCGATGCCCACCCGGCCCAGTTGGCCGGCCCGTGTCt < 3:117762/149‑1 (MQ=255) gCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGCCCGATGCCCACCCGGCCCAGTTGGCCGGCCCGTGTCTGc > 2:228996/1‑149 (MQ=255) atgatgTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGCCCGATGCCCACCCGGCCCAGTTGGCCGGCCCGTGTCTGCtt > 4:237530/1‑149 (MQ=255) cgccGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGCCCGATGCCCACCCGGCCAactgggccgggtgg < 7:69182‑M2/129‑5 (MQ=255) cgccGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGCCCGATGCCCACCCGGCCAactgggccgggtgg > 8:69182‑M2/5‑129 (MQ=255) gccGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGCCCGATGCCCACCCGGCCCAGTTGGCCGGCCCGTGTCTGCTTGCGCGa > 6:79932‑M2/4‑147 (MQ=255) cGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGCCCGATGCCCACCCGGCCCAGTTGGCCGGCCCGTGTCTGCTTGCGCGAAAg > 3:98760‑M2/2‑148 (MQ=255) | TTGGCGCCGACCACCAGCCCGATGGCGACCGGCAGGCTGATCAGTTCGGCGCCGGCCAGTGTCGCTGTGAGCAGAACGGCGGCCAGGCTGGAATAGGAAATCATGGCGAACATTGCCCCGACCAGAGCGTCGAGCATGATGTCGCCGGTCAGTGAGGCAAACAGCACTTTCACGCCTTGGGCTTGGGTGATCGGCGCCGCTGCCTGCACGATAAGTTCGAGTGCCAGGATGATCAGGCCAAGCCCGATGCCCACCCGGCCCAGTTGGCCGGCCCGTGTCTGCTTGCGCGAAAG > NC_002947/154646‑154938 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |