New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 582183 | 50 (0.950) | 4 (0.080) | 4/248 | NT | 7.4% | coding (49/1923 nt) | selB | selenocysteyl‑tRNA‑specific translation elongation factor |
? | NC_002947 | = 582217 | 52 (1.010) | coding (83/1923 nt) | selB | selenocysteyl‑tRNA‑specific translation elongation factor |
GCGCCAGCTGGATGACGAAGCCCAGTGGCTGGCCCAGTTGCCAGCCCTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTATCCACAACATGCTGGCCGGCGCCCATGGCATC > NC_002947/582069‑582362 | gcgcCAGCTGGATGACGAAGCCCAGTGGCTGGCCCAGTTGCCAGCCCTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCg > 2:272483/1‑149 (MQ=255) cTGGATGACGAAGCCCAGTGGCTGGCCCAGTTGCCAGCCCTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCaagaa < 5:364160/149‑1 (MQ=255) gATGACGAAGCCCAGTGGCTGGCCCAGTTGCCAGCCCTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAagaaga < 1:127910/148‑1 (MQ=255) aTGACGAAGCCCAGTGGCTGGCCCAGTTGCCAGCCCTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGTAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAgc < 6:120049/149‑1 (MQ=255) aCGAAGCCCAGTGGCTGGCCCAGTTGCCAGCCCTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAgcgcg > 7:207104/1‑149 (MQ=255) aGCCCAGTGGCTGGCCCAGTTGCCAGCCCTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCcg > 5:69368/1‑149 (MQ=255) cccAGTGGCTGGCCCAGTTGCCAGCCCTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCcgcg < 5:178749/149‑1 (MQ=255) gTGGCTGGCCCAGTTGCCAGCCCTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCAt < 5:106120/149‑1 (MQ=255) cccAGTTGCCAGCCCTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGTGCCCGCGGCATGACCATCg < 1:272483/149‑1 (MQ=255) ccAGCCCTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAgcgc > 8:154205/1‑122 (MQ=255) ccAGCCCTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAgcgc < 7:154205/122‑1 (MQ=255) cAGCCCTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCt > 1:85021/1‑144 (MQ=255) cAGCCCTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCt < 2:85021/144‑1 (MQ=255) aGCCCTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGCCCTTGGCTa > 8:87514/1‑149 (MQ=255) gCCCTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTAc < 7:313923/149‑1 (MQ=255) cccTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGg > 2:39458‑M2/1‑105 (MQ=255) cTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCg > 4:329057/1‑148 (MQ=255) tGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATg > 5:346855/1‑127 (MQ=255) tGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATg < 6:346855/127‑1 (MQ=255) aGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAg > 8:172692/1‑149 (MQ=255) tGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCCGCGGCAAGAAGACCGCGCCCGCGGCATGACCATCGCCCTTGGCTACCGCTATgcgg > 4:244088/1‑135 (MQ=255) tGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGgcgc < 1:90672/138‑1 (MQ=255) tGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGgcgc > 2:90672/1‑138 (MQ=255) ggctCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCGGCGGGCGCTGACCGGCCAGGCCGGCGACCAGCTGCAAGAAGAGCGCGCCCGCTGCATGACCATCGACCTTGGCTACCGCTATgcgg < 3:244088/132‑1 (MQ=255) gATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGAc < 8:23965/115‑1 (MQ=255) gATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGAc > 7:23965/1‑115 (MQ=255) ccGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGAcc < 3:329057/149‑1 (MQ=255) cGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCg < 8:207104/149‑1 (MQ=255) gCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCtt > 1:127446/1‑148 (MQ=255) cacaTCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCAt < 7:172692/149‑1 (MQ=255) acaTCGACCACGGCAAGACCGCACTGTTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATgcgg < 2:93650/114‑1 (MQ=255) acaTCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAg < 8:220303/126‑1 (MQ=255) aTCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGa > 8:333681/1‑149 (MQ=255) tCGACCACGACAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGAt > 2:146109/1‑149 (MQ=255) aaGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCa > 7:295899/1‑149 (MQ=255) aCCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGa < 8:295899/149‑1 (MQ=255) cGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGgcagtgcggtcttgccgtggtcgatgtggccagcggtaccaacgatcactgcaccggccccagctgcagggctggcaactgggccagccactgggcttcgtcatc > 8:1286‑M2/1‑42 (MQ=255) cGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGgcagtgcggtcttgccgtggtcgatgtggccagcggtaccaacgatcactgcaccggccccagctgcagggctggcaactgggccagccactgggcttcgtcatc < 7:1286‑M2/147‑106 (MQ=255) cGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCGAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAgc > 5:57552/1‑149 (MQ=255) gCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGa > 6:76996/1‑146 (MQ=255) gCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGa < 5:76996/146‑1 (MQ=255) aCTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGgcagtgcggtcttgccgtggtcgatgtggccagcggtaccaacgatcactgcaccggccccagctgcagggctggcaactgggccagccactgggcttc < 5:268231‑M2/138‑100 (MQ=255) aCTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGgcagtgcggtcttgccgtggtcgatgtggccagcggtaccaacgatcactgcaccggccccagctgcagggctggcaactgggccagccactgggcttc > 6:268231‑M2/1‑39 (MQ=255) aCTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCggg > 6:340061/1‑138 (MQ=255) aCTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCggg < 5:340061/138‑1 (MQ=255) aCTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCt < 5:167947/149‑1 (MQ=255) ctgctgGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTa < 6:69368/148‑1 (MQ=255) tgctgGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTATc > 8:208449/1‑149 (MQ=255) ctgGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTATc < 7:87514/147‑1 (MQ=255) ctgGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTATCca > 2:298286/1‑149 (MQ=255) cgcTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTATCCacaac < 7:208449/149‑1 (MQ=255) gcTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTATCCacaaca > 3:262130/1‑149 (MQ=255) gcTGACCGACCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGgcgc < 4:309355/96‑1 (MQ=255) gcTGACCGACCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGgcgc > 3:309355/1‑96 (MQ=255) cGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTATCCACAACATGCTg > 3:4687/1‑148 (MQ=255) cGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTATCCACAACATGCTg < 4:4687/148‑1 (MQ=255) ggCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTATCCACAACATGCTGGc < 2:127446/149‑1 (MQ=255) cGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCTCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTa < 2:267356/125‑1 (MQ=255) cGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTa > 1:267356/1‑125 (MQ=255) gCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTATCCACAACATGc > 4:114933/1‑128 (MQ=255) gCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTATCCACAACATGCTGGCCGGCGCCCATGGCATc > 2:60342/1‑148 (MQ=255) | GCGCCAGCTGGATGACGAAGCCCAGTGGCTGGCCCAGTTGCCAGCCCTGCAGCTGGGGCCGGTGCAGTGATCGTTGGTACCGCTGGCCACATCGACCACGGCAAGACCGCACTGCTGCTGGCGCTGACCGGCCAGGCCGGCGACCAGCGGCAAGAAGAGCGCGCCCGCGGCATGACCATCGACCTTGGCTACCGCTATGCGGCGCTGAGCGAAGGCGCGCCGCTGACCGGCTTCATCGATGTGCCGGGCCACGAGCGCTTTATCCACAACATGCTGGCCGGCGCCCATGGCATC > NC_002947/582069‑582362 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |