New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 67854351 (0.970)3 (0.060) 3/240 NT 6.4% coding (475/1374 nt) PP_0581 3‑oxoacyl‑ACP reductase
?NC_002947 = 678580 39 (0.780)coding (438/1374 nt) PP_0581 3‑oxoacyl‑ACP reductase

ACTCTTTGGCGAGAGGAAGAAGCGCAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATCG  >  NC_002947/678436‑678721
                                                                                                                                                 |                                                                                                                                               
tgaagcagttgcgtgaatttttccagccgctgttacgcagcctggccccatgcgcccatgtactggtgctgggccgtgcaccggaaggcctcgacgacccacTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTg                                                                                                                                              <  7:200049‑M1/47‑1 (MQ=255)
aCTCTTTGGCGAGAGGAAGAAGCGCAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGctgg                                                                                                                                             <  4:79242‑M2/149‑5 (MQ=255)
  tctTTGGCGAGAGGAAGAAGCGCAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGctggc                                                                                                                                            <  3:124638‑M2/148‑6 (MQ=255)
   agcagttgcgggaatttttccagccgctgttacgcagcctggccccatgcgcccatgtactggtgctgggccgtgcaccggaaggcctcgacgacccacTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGcc                                                                                                                                           >  3:187450‑M1/100‑149 (MQ=255)
    tttGGCGAGAGGAAGAAGCGCAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACg                                                                                                                                                 >  1:130499/1‑141 (MQ=255)
    tttGGCGAGAGGAAGAAGCGCAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACg                                                                                                                                                 <  2:130499/141‑1 (MQ=255)
     cagttgcgtgaatttttccagccgctgttacgcagcctggccccatgcgcccatgtactggtgctgggccgtgcaccggaaggcctcgacgacccacTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAg                                                                                                                                         >  8:200049‑M1/98‑149 (MQ=255)
               gaagaaGCGCAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGgtcgtc                                                                                                                                >  6:333394/1‑147 (MQ=255)
                aagaagCGCAGGGCGCCTTCCAGCTGATCTTCGGCACCGGTGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAg                                                                                                                             >  7:255503/1‑149 (MQ=255)
                 agaagCGCAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAgg                                                                                                                            >  7:24954/1‑149 (MQ=255)
                  gaagCGCAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGc                                                                                                                           >  1:12206/1‑149 (MQ=255)
                       gcAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGTAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGctg                                                                                                                                              <  1:185184‑M2/125‑4 (MQ=255)
                       gcAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGTAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGctg                                                                                                                                              >  2:185184‑M2/1‑122 (MQ=255)
                        cAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCg                                                                                                                     <  5:220235/149‑1 (MQ=255)
                         aGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGt                                                                                                                   >  6:288292/1‑149 (MQ=255)
                           ggCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTg                                                                                                                  <  5:333394/149‑1 (MQ=255)
                                   ccAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGcc                                                                                                           >  7:32654/1‑148 (MQ=255)
                                    cAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCa                                                                                                         <  8:32654/149‑1 (MQ=255)
                                                 gCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATg                                                                                          <  2:12206/149‑1 (MQ=255)
                                                  cACCGGTGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATgg                                                                                         <  8:255503/149‑1 (MQ=255)
                                                  cACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATgg                                                                                         <  3:149108/149‑1 (MQ=255)
                                                    ccGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGgc                                                                                       <  4:188569/149‑1 (MQ=255)
                                                      gggggCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGgcgc                                                                                     <  4:266619/149‑1 (MQ=255)
                                                      gggggCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGgcg                                                                                      >  3:266619/1‑148 (MQ=255)
                                                        gggCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCAt                                                                                   <  3:79242/149‑1 (MQ=255)
                                                             aCATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATgggg                                                                               >  1:232563/1‑149 (MQ=255)
                                                                  cagcagCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGc                                                                         >  5:72029/1‑149 (MQ=255)
                                                                     cagcTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGc                                                                      <  4:124638/149‑1 (MQ=255)
                                                                      agcTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGc                                                                      <  2:187787/148‑1 (MQ=255)
                                                                      agcTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCg                                                                     <  6:330490/149‑1 (MQ=255)
                                                                               gTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGctg                                                                                                                                              >  8:91024‑M2/1‑66 (MQ=255)
                                                                               gTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGctg                                                                                                                                              <  7:91024‑M2/69‑4 (MQ=255)
                                                                                    gcCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTgg                                                        >  4:295977/1‑148 (MQ=255)
                                                                                       aTTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTa                                                                                              >  4:304075/1‑107 (MQ=255)
                                                                                       aTTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTa                                                                                              <  3:304075/107‑1 (MQ=255)
                                                                                       aTTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGaaaa                                                    <  3:295977/149‑1 (MQ=255)
                                                                                           cgcAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGTCAGGCTGCGTAACAGCGGCTGGAAAAATTc                                                <  2:232563/149‑1 (MQ=255)
                                                                                              aGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACg                                             >  8:333444/1‑149 (MQ=255)
                                                                                                     ttGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGctggccaaggaactgcgcaatggcgctactgcccagctgctgtatgtcgcccccggtgccgaagatcagctggaaggcgccctgcgcttcttcctctcgcca                                           <  6:99568‑M2/147‑103 (MQ=255)
                                                                                                      tGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGctggccaaggaactgcgcaatggcgctactgcccagctgctgtatgtcgcccccggtgccgaagatcagctggaaggcgccctgcgcttcttcctctcgc                                             <  3:9484‑M2/144‑101 (MQ=255)
                                                                                                      tGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGctggccaaggaactgcgcaatggcgctactgcccagctgctgtatgtcgcccccggtgccgaagatcagctggaaggcgccctgcgcttcttcctctcgc                                             >  4:9484‑M2/1‑44 (MQ=255)
                                                                                                       GGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCCCTGCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACt                                        >  1:104562‑M1/1‑148 (MQ=255)
                                                                                                           AGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAg                                 <  8:197987‑M1/149‑1 (MQ=255)
                                                                                                                       aaGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTc                     >  7:43286/1‑149 (MQ=255)
                                                                                                                            cTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGt                                >  2:167312/1‑133 (MQ=255)
                                                                                                                            cTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGt                                <  1:167312/133‑1 (MQ=255)
                                                                                                                            cTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTTCATCGCGGTCGTAc                 >  8:146671/1‑148 (MQ=255)
                                                                                                                            cTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACa                <  7:197987/149‑1 (MQ=255)
                                                                                                                                    cACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTg        <  7:333444/149‑1 (MQ=255)
                                                                                                                                    cACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTg        <  6:72029/149‑1 (MQ=255)
                                                                                                                                        cTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCAt    <  8:43286/149‑1 (MQ=255)
                                                                                                                                         tgtgCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATc   >  8:46398/1‑149 (MQ=255)
                                                                                                                                           tgCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATc   <  7:146671/147‑1 (MQ=255)
                                                                                                                                           tgCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATCg  >  4:158177/1‑148 (MQ=255)
                                                                                                                                           tgCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATCg  >  4:152964/1‑148 (MQ=255)
                                                                                                                                                 gCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCAc                                              >  3:147500/1‑98 (MQ=255)
                                                                                                                                                 gCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCAc                                              <  4:147500/98‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                               
ACTCTTTGGCGAGAGGAAGAAGCGCAGGGCGCCTTCCAGCTGATCTTCGGCACCGGGGGCGACATACAGCAGCTGGGCAGTAGCGCCATTGCGCAGTTCCTTGGCCAGTGAGCGGCTGAAGCCCTCAAGGGCACGCTGTGCAACGCTGGCCAGTGGGTCGTCGAGGCCTTCCGGTGCACGGCCCA‑‑GCACCAGTACATGGGCGCATGGGGCCAGGCTGCGTAACAGCGGCTGGAAAAATTCACGCAACTGCTTCAGTGCATCGCTGTCGGACAAGTGACTGGCATCG  >  NC_002947/678436‑678721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.