New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	786592 =	45 (0.850)	8 (0.170)	8/232	NT	19.7%	intergenic (+14/‑291)	PP_0673/ettA	hypothetical protein/ADP/ATP ratio sensor/translation inhibitor
	?	NC_002947	786700 =	24 (0.500)					intergenic (+122/‑183)	PP_0673/ettA	hypothetical protein/ADP/ATP ratio sensor/translation inhibitor

GCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGCGATCGG  >  NC_002947/786558‑786847                                                                                                                                               |                                                                                                                                                    gCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCGCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAAt                                                                                                                                                 <  7:282550/147‑1 (MQ=255)  ccAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGaa                                                                                                                                              <  5:336602/149‑1 (MQ=255)       cAGCGGCACGTCGGAGTCTCTTCGGCGGCTGTGCCGGCCCTTTCGCGGGCGCGCCCGCTCCCACAGGAAGCGCGGATGCTTCCGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCAt                                                                                                                                         <  5:54475/149‑1 (MQ=38)             cACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCATTAGCGGGCTCGCCCCCAACCACACGAATCGCGGATTCATAAGGCAATGTGGTGACGCGGTGGGACCGGGCCAGCCCCACAAGAGGCCCGCACACGCAATAAAATCATCCCaa                                                                                                                                    >  4:23953/1‑147 (MQ=255)                         tctTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGAt                                                                                                                       >  1:6296/1‑149 (MQ=255)                           ttCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGa                                                                                                                        <  7:182196/146‑1 (MQ=255)                           ttCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGa                                                                                                                        <  3:23953/146‑1 (MQ=255)                              ggCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATcaca                                                                                                                   <  8:40954/148‑1 (MQ=255)                                 tgctgTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTAAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACAcccc                                                                                                               >  4:66355/1‑149 (MQ=255)                                   CTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCccac                                                                                                             <  8:29341‑M1/149‑1 (MQ=255)                                        CCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATc                                                                                                         >  7:29341‑M1/1‑148 (MQ=255)                                           GCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGcc                                                                                                     <  2:39164‑M1/149‑1 (MQ=255)                                                       gCTCGCCCGCTCCCACAGGAATCGCGGATTCTACAGGCTCTGTGGTGACGCTCTGCGAGCGCGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCCCACTGAACACACCCCACCATCCGCCCCTCCTATGCaa                                                                                         >  6:62774/1‑149 (MQ=255)                                                           gCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGc                                                                                                      >  4:346152/1‑132 (MQ=255)                                                           gCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGc                                                                                                      <  3:346152/132‑1 (MQ=255)                                                             ccgctcccacagcgtcaccacagagcctgaagaatccgcgattcctgtgggagcgggcgagcccgcgaaagggccggcacagGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAAcgccgc                                                                                   >  2:204410‑M2/83‑149 (MQ=255)                                                               gctcccacagcgtcaccacagagcctgaagaatccgcgattcctgtgggagcgggcgagcccgcgaaagggccggcacagGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGc                                                                                           <  2:332742‑M2/59‑1 (MQ=255)                                                               gctcccacagcgtcaccacagagcctgaagaatccgcgattcctgtgggagcgggcgagcccgcgaaagggccggcacagGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGc                                                                                           >  1:332742‑M2/81‑139 (MQ=255)                                                               gCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGcccc                                                                                                   >  5:225166/1‑131 (MQ=255)                                                               gCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGcccc                                                                                                   <  6:225166/131‑1 (MQ=255)                                                                   ccacagcgtcaccacagagcctgaagaatccgcgattcctgtgggagcgggcgagcccgcgaaagggccggcacagGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTg                                                                             >  5:3039‑M2/77‑149 (MQ=255)                                                                   ccACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTg                                                                             <  1:39164/149‑1 (MQ=255)                                                                    cacaGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTgg                                                                            >  5:217228/1‑149 (MQ=255)                                                                        ggAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTa                                                                        <  2:6296/149‑1 (MQ=255)                                                                              gcgGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATg                                                                   <  3:66355/148‑1 (MQ=255)                                                                                       ctgaagaatccgcgattcctgtgggagcgggcgagcccgcgaaagggccggcacagGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTg                                                         <  6:3039‑M2/93‑1 (MQ=255)                                                                                         aGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGtt                                                       <  5:62774/149‑1 (MQ=255)                                                                                             aatccgcgattcctgtggtagcgggcgagcccgcgaaagggccggcacagGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTACTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAAt                                                   <  1:204410‑M2/99‑1 (MQ=255)                                                                                                 tggtgACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCACTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGaca                                               >  7:165431/1‑149 (MQ=255)                                                                                                        gCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGt                                         >  8:36176/1‑148 (MQ=255)                                                                                                                 gcgggcgagcccgcgaaagggccggcacagGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACAcccc                                           <  7:330902‑M2/107‑1 (MQ=255)                                                                                                                 gcgggcgagcccgcgaaagggccggcacagGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACAcccc                                           >  8:330902‑M2/31‑137 (MQ=255)                                                                                                                    ggCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCAc                            >  6:310802/1‑149 (MQ=255)                                                                                                                      cATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTg                          <  6:217228/149‑1 (MQ=255)                                                                                                                      cATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTg                          >  3:205965/1‑149 (MQ=255)                                                                                                                              cgAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACcgc                  <  4:205965/149‑1 (MQ=255)                                                                                                                                 agagGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGt                <  8:165431/148‑1 (MQ=255)                                                                                                                                        ggcacagGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTAAGCAACCCCGCGCCTTGGCGTAGAATGGTCGACTTTGTTAAATAACACACCGTAAACACAACCCACTGGCCACCGCGTGCCGGGGc        >  8:199461‑M2/8‑149 (MQ=255)                                                                                                                                           acagGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGc        >  6:65477‑M2/5‑146 (MQ=255)                                                                                                                                           acagGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGc        <  5:65477‑M2/142‑1 (MQ=255)                                                                                                                                             agGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTg                                                         <  8:926‑M2/93‑1 (MQ=255)                                                                                                                                              gGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGCGATCgg  >  8:175060‑M2/2‑149 (MQ=255)                                                                                                                                               |                                                                                                                                                    GCCAAACAGCGTCACGTCTGAGTCTCTTCGGCTGCTGTGCCGGCCCTTTCGCGGGCTCGCCCGCTCCCACAGGAATCGCGGATTCTTCAGGCTCTGTGGTGACGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCGGCACAGGCAATGAATTCATCCCAGTGACCGCACTGATCACACCCCACCATCGGCCCCTCCTATGCAACGCCGCGCGTTGGCGTAGAATGGTCGACTTTGTTCAATGACACCCCGTAAACACATCCCACTGGCCACCGCGTGCCGGGGCGATCGG  >  NC_002947/786558‑786847

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.