New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 989423	47 (0.890)	5 (0.100)	5/240	NT	9.7%	coding (1275/1290 nt)	hisS	histidine‑‑tRNA ligase
	?	NC_002947	= 989438	49 (0.980)					coding (1290/1290 nt)	hisS	histidine‑‑tRNA ligase

CACTGTTCGCCCTGATCCTCGGCGACGACGAGCTGGCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCATTGCTGGCTGGCGTGGTGGTGTTGGG  >  NC_002947/989296‑989584                                                                                                                                               |                                                                                                                                                   cACTGTTCGCCCTGATCCTCGGCGACGACGAGCTGGCCAAGCAAGAAATCGGCTTGTAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAAcgcggt                                                                                                                                              <  4:40764‑M2/149‑7 (MQ=255) cACTGTTCGCCCTGATCCTCGGCGACGACGAGCTGGCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAAcgcggt                                                                                                                                              <  1:234546‑M2/149‑7 (MQ=255)    tGTTCGCCCTGATCCTCGGCGACGACGAGCTGGCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTc                                                                                                                                            >  4:276123/1‑148 (MQ=255)     gTTCGCCCTGATCCTCGGCGACGACGAGCTGGCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTcaa                                                                                                                                          >  5:178151/1‑149 (MQ=255)      ttCGCCCTGATCCTCGGCGACGACGAGCTGGCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTcaac                                                                                                                                         <  7:195262/149‑1 (MQ=255)          cccTGATCCTCGGCGACGACGAGCTGGCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGc                                                                                                                                     <  6:178151/149‑1 (MQ=255)           ccTGATCCTCGGCGACGACGAGCTGGCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCTTAACGCGGTTCAACAAGc                                                                                                                                     <  1:200163/148‑1 (MQ=255)           ccTGATCCTCGGCGACGACGAGCTGGCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAAcgcgg                                                                                                                                               >  6:350799‑M2/1‑133 (MQ=255)           ccTGATCCTCGGCGACGACGAGCTGGCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAAcgcgg                                                                                                                                               <  5:350799‑M2/138‑6 (MQ=255)           ccTGATCCTCGGCGACGACGAGCTGGCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGc                                                                                                                                     >  2:200163/1‑148 (MQ=255)               aTCCTCGGCGACGACGAGCTGGCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCTCGCAAGCGTAACGCGGTTCAACAAGCGAAt                                                                                                                                 <  4:175733/148‑1 (MQ=255)               aTCCTCGGCGACGACGAGCTGGCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAAt                                                                                                                                 <  5:37824/148‑1 (MQ=255)                   tCGGCGACGACGAGCTGGCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGc                                                                                                                             >  5:148431/1‑148 (MQ=255)                      gCGACGACGAGCTGGCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGaa                                                                                                                          >  2:213735/1‑148 (MQ=255)                        gacgacgaGCTGGCCAAGCAAGAAATCGGCTTGTAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAg                                                                                                                       <  3:40764/149‑1 (MQ=255)                             cgaGCTGGCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTa                                                                                                                  <  3:240252/149‑1 (MQ=255)                                 cTGGCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTgg                                                                                                              <  2:234546/149‑1 (MQ=255)                                    gCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTTCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGgt                                                                                                           >  8:196101/1‑149 (MQ=255)                                    gCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGgt                                                                                                           >  7:75267/1‑149 (MQ=255)                                     ccAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGgtg                                                                                                          >  3:33742/1‑149 (MQ=255)                                         gcaagAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGa                                                                                                      <  8:75267/149‑1 (MQ=255)                                                 tCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAg                                                                                                                                      <  2:122349/109‑1 (MQ=255)                                                 tCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCgat                                                                                              <  8:110759/149‑1 (MQ=255)                                                    gCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGa                                                                                                                     <  6:118625/123‑1 (MQ=255)                                                     cTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCgatgat                                                                                           >  6:124678/1‑148 (MQ=255)                                                        gAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCgatgatga                                                                                         <  3:276123/147‑1 (MQ=255)                                                                 gCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGTTA‑CGCTTGCGCGAtcgcggtttccaggtgctctgcaaga                                                                                                                          >  3:170198‑M2/1‑78 (MQ=255)                                                                 gCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGTTA‑CGCTTGCGCGAtcgcggtttccaggtgctctgcaaga                                                                                                                          <  4:170198‑M2/104‑27 (MQ=255)                                                                  cGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCa                                                                               <  6:148431/147‑1 (MQ=255)                                                                           ggTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGa                                                                    >  2:247280/1‑149 (MQ=255)                                                                                acaacaGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCTCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGAGGATGATGACCTGGCAGGCGTCAAGGACtggt                                                               <  1:213735/149‑1 (MQ=255)                                                                                     aGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAAc                                                          >  2:126132/1‑149 (MQ=255)                                                                                         cATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATAGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGc                                                       >  5:251741/1‑148 (MQ=255)                                                                                               cTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGc                                                 >  4:289441/1‑148 (MQ=255)                                                                                                  ggATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCaa                                               <  6:251741/147‑1 (MQ=255)                                                                                                         ctTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCgctgct                                      >  6:309549/1‑149 (MQ=255)                                                                                                            gCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCaa                                                                       >  6:119173/1‑113 (MQ=255)                                                                                                            gCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCaa                                                                       <  5:119173/113‑1 (MQ=255)                                                                                                            gCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGAc                                   >  6:177174/1‑149 (MQ=255)                                                                                                              agagCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCg                                 >  7:25764/1‑149 (MQ=255)                                                                                                                agCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGGACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGt                               <  5:124678/149‑1 (MQ=255)                                                                                                                    ccTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAAc                                                          >  2:324134/1‑118 (MQ=255)                                                                                                                     cTGGAAACCGCGATCGCGCAAGCGTAAcgcggtttccaggtgctctgcaagagcatcccaggcaatgttctgttgttcaccctggccacgcagg                                                                                 >  5:285422‑M2/1‑27 (MQ=255)                                                                                                                     cTGGAAACCGCGATCGCGCAAGCGTAAcgcggtttccaggtgctctgcaagagcatcccaggcaatgttctgttgttcaccctggccacgcagg                                                                                 <  6:285422‑M2/94‑68 (MQ=255)                                                                                                                     cTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAg                                              <  3:202744/129‑1 (MQ=255)                                                                                                                     cTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAg                                              >  4:202744/1‑129 (MQ=255)                                                                                                                     cTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCAtt                          >  2:165647/1‑149 (MQ=255)                                                                                                                     cTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCAtt                          >  2:171029/1‑149 (MQ=255)                                                                                                                       ggAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCATTgc                        >  4:306550/1‑149 (MQ=255)                                                                                                                        gAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCATTgc                        <  5:177174/148‑1 (MQ=255)                                                                                                                          aaCCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCATTgctgg                     <  7:196101/149‑1 (MQ=255)                                                                                                                          aaCCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCATTgctgg                     >  3:261106/1‑149 (MQ=255)                                                                                                                          aaCCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGGATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGGCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCATTgctgg                     <  5:174863/149‑1 (MQ=255)                                                                                                                           aCCGCGATCGCGCAAGCGTAAcgcggtttccaggtgctctgcaagagcatcccaggcaatgttctgttgttcaccctggccacgcaggggcttcaagccgatttcttgcttggccagctcgtcgtcgccgaggatcagggcgaacagtg                    <  3:85917‑M2/149‑129 (MQ=255)                                                                                                                              gcgATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCATTGctggctgg                 >  6:136682/1‑149 (MQ=255)                                                                                                                               cgATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGCCCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCATTGCtggctggc                >  8:191656/1‑149 (MQ=255)                                                                                                                                  tCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCATTGCTGGCTGGCgtg             <  3:289441/149‑1 (MQ=255)                                                                                                                                  tCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCATTGCTGGCTGGCgtg             >  4:45634/1‑149 (MQ=255)                                                                                                                                    gcgcAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCATTGCTGGCTGGCgtgg            <  1:126132/148‑1 (MQ=255)                                                                                                                                     cgcAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCATTGCTGGCTGGCgtggtg          <  8:25764/149‑1 (MQ=255)                                                                                                                                       cAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCATTGCTGGCTGGCgtggtggt        <  5:136682/149‑1 (MQ=255)                                                                                                                                            gTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCATTGCTGGCTGGCGTGGTGGTGTTgg   <  1:171029/149‑1 (MQ=255)                                                                                                                                            gTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCATTGCTGGCTGGCGTGGTGGTGTTgg   <  1:165647/149‑1 (MQ=255)                                                                                                                                             tAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCATTGCTGGCTGGCGTGGTGGTGTTggg  <  5:309549/149‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                   CACTGTTCGCCCTGATCCTCGGCGACGACGAGCTGGCCAAGCAAGAAATCGGCTTGAAGCCCCTGCGTGGCCAGGGTGAACAACAGAACATTGCCTGGGATGCTCTTGCAGAGCACCTGGAAACCGCGATCGCGCAAGCGTAACGCGGTTCAACAAGCGAATAGGCGAAAAGGAGTATTGGGGTGTCGAGTACCGATGATGATGACCTGGCAGGCGTCAAGGACTGGTGGAACCGCAACGGCAAGCCGCTGCTGACCGGTGCATTGCTGGCTGGCGTGGTGGTGTTGGG  >  NC_002947/989296‑989584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.