BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2320717 =	99 (1.870)	7 (0.140)	5/248	NT	7.0%	coding (524/945 nt)	PP_2041	LysR family transcriptional regulator
*	?	NC_002947	2320742 =	89 (1.730)	7 (0.140)	5/248	NT	7.0%	coding (499/945 nt)	PP_2041	LysR family transcriptional regulator

Only 100 of 119 total aligned reads displayed.

TCCAGTGTCACACCGGTTTCCATGGCAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGG  >  NC_002947/2320597‑2320889

tCCAGTGTCACACCGGTTTCCATGGCAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAAt                                                                                                                                                    >  3:156013/1‑148 (MQ=255)

tCCAGTGTCACACCGGTTTCCATGGCAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATa                                                                                                                                                   <  8:319703/149‑1 (MQ=255)

  ctgagccgcgaaggtggccaggcgatcgagctgggcaaggtggatttcggcgtggtgcccaacgccgaagaacttgtccatgtggtcgccgagcccgtgttttccgaagacctgtattGGGCCGTGCCCAGGCAGGCCGACCCAATACa                                                                                                                                                 >  7:110777‑M1/119‑149 (MQ=255)

   aGTGTCACACCGGTTTCCATGGCAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAg                                                                                                                                                >  5:355427/1‑149 (MQ=255)

   aGTGTCACACCGGTTTCCATGGCAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAg                                                                                                                                                <  5:93780/149‑1 (MQ=255)

     agccgcgaaggtggccaggcgatcgagctgggcaaggtggatttcggcgtggtgcccaacgccgaagaacttgtccatgtggtcgccgagcccgtgttttccgaagacctgtattGGGCCGTGCCCAGGCAGGCCGACCCAATACAg                                                                                                                                                >  2:194799‑M1/116‑147 (MQ=255)

         acacCGGTTTCCATGGCAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTc                                                                                                                                          >  6:117274/1‑149 (MQ=255)

          cacCGGTTTCCATGGCAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCCACCCAATACAGGTCTTCg                                                                                                                                         >  5:353163/1‑149 (MQ=255)

           acCGGTTTCCATGGCAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCaa                                                                                                                                                     >  6:187981/1‑136 (MQ=255)

           acCGGTTTCCATGGCAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCaa                                                                                                                                                     <  5:187981/136‑1 (MQ=255)

           acCGGTTTCCATGGCAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCg                                                                                                                                         <  6:186384/148‑1 (MQ=255)

           acCGGTTTCCATGGCAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCg                                                                                                                                         >  5:186384/1‑148 (MQ=255)

               gTTTCCATGGCAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGaaaa                                                                                                                                    >  3:55412/1‑149 (MQ=255)

                tctCCATGGCAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGaaaa                                                                                                                                    >  8:147341/3‑148 (MQ=255)

                    cATGGCAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑g                                                                                                                               <  4:243647/148‑1 (MQ=255)

                       ggCAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTc                                                                                                                                          >  2:191121/1‑135 (MQ=255)

                       ggCAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTc                                                                                                                                          <  1:191121/135‑1 (MQ=255)

                         cAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCg                                                                                                                         <  8:40054/149‑1 (MQ=255)

                           gCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGc                                                                                                                       <  4:55412/149‑1 (MQ=255)

                             cTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGa                                                                                                                     >  2:281033/1‑149 (MQ=255)

                              tGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGAc                                                                                                                    >  3:155808/1‑149 (MQ=255)

                                   gATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACAt                                                                                                               <  2:88309/149‑1 (MQ=255)

                                   gATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACAt                                                                                                               <  8:89884/149‑1 (MQ=255)

                                   gATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACAt                                                                                                               <  6:355427/149‑1 (MQ=255)

                                    aTGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATg                                                                                                              <  3:164519/149‑1 (MQ=255)

                                        gcCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCg                                                                                                                         <  2:150542/134‑1 (MQ=255)

                                        gcCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCg                                                                                                                         >  1:150542/1‑134 (MQ=255)

                                         gtggatttcggcgtggtgcccaacgccgaagaacttgtccatgtggtcgccgagcccgtgttttccgaagacctgtattGGGCCGTGCCCAGGCAGGCCGACCCAATACAg                                                                                                                                                <  2:256217‑M1/32‑1 (MQ=255)

                                         gtggatttcggcgtggtgcccaacgccgaagaacttgtccatgtggtcgccgagcccgtgttttccgaagacctgtattGGGCCGTGCCCAGGCAGGCCGACCCAATACAg                                                                                                                                                >  1:256217‑M1/80‑111 (MQ=255)

                                         ccTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGAc                                                                                                           >  2:57923/1‑147 (MQ=255)

                                         ccTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACaa                                                                                                         <  4:23483/149‑1 (MQ=255)

                                              gcAAGTTCATGCTACGGTGTTGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGAGACTCGTCAGGGCCGTGCCCAGGAAGGCCGACCCAATACAGGTCTTCTGAAAACAC‑GGGCTCGGc                                                                                                                       <  4:111023/130‑1 (MQ=255)

                                                  ggcgtggtgcccaacgccgaagaacttgtccatgtggtcgccgagcccgtgttttccgaagacctgtattGGGCCGTGCCCAGGCAGGCCGACCCAATACAg                                                                                                                                                >  5:214803‑M1/71‑102 (MQ=255)

                                                  ggcgtggtgcccaacgccgaagaacttgtccatgtggtcgccgagcccgtgttttccgaagacctgtattGGGCCGTGCCCAGGCAGGCCGACCCAATACAg                                                                                                                                                <  6:214803‑M1/32‑1 (MQ=255)

                                                       ggCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACACAGGGCTCGGCGACCACATGGACAAGTTCTTCGGCGtt                                                                                            <  1:57923/149‑1 (MQ=255)

                                                       ggCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCg                                                                                                 <  1:13495/143‑1 (MQ=255)

                                                       ggCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCg                                                                                                 >  2:13495/1‑143 (MQ=255)

                                                       ggCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGtt                                                                                            <  6:353163/148‑1 (MQ=255)

                                                       ggCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTg                                                                                           <  4:156013/149‑1 (MQ=255)

                                                       ggCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTg                                                                                           <  7:147341/149‑1 (MQ=255)

                                                          tACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTggg                                                                                         >  4:230481/1‑148 (MQ=255)

                                                          tACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTggg                                                                                         >  4:320540/1‑148 (MQ=255)

                                                             ggggTGGCATTACCAGGCGGCTCGCTGCGGATTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGcacc                                                                                     <  4:110863/149‑1 (MQ=255)

                                                                  ggCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTg                                                                                           >  8:151092/1‑138 (MQ=255)

                                                                  ggCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTg                                                                                           <  7:151092/138‑1 (MQ=255)

                                                                     aTTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGcacca                                                                                    >  7:271301/1‑142 (MQ=255)

                                                                     aTTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTGGTGCCCAACGCCGaa                                                                             <  5:117274/149‑1 (MQ=255)

                                                                            ggcggcTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGc                                                                                 >  4:247378/1‑138 (MQ=255)

                                                                            ggcggcTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCAcc                                                                      <  3:320540/149‑1 (MQ=255)

                                                                            ggcggcTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTGGTGCCCAACGCCGAAAtgggct                                                                      >  7:195231/1‑144 (MQ=255)

                                                                             gcggcTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCt                                                                     >  3:270750/1‑149 (MQ=255)

                                                                              cggcTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCtt                                                                    <  6:65666/149‑1 (MQ=255)

                                                                                        cGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCt                                                            <  4:155808/147‑1 (MQ=255)

                                                                                        cGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTc                                                           >  2:311382/1‑148 (MQ=255)

                                                                                           cTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATc                                                       >  3:104959/1‑149 (MQ=255)

                                                                                            ttCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCg                                                      >  8:35278/1‑149 (MQ=255)

                                                                                            ttCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCg                                                      >  1:49788/1‑149 (MQ=255)

                                                                                               aGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCg                                                                                                                         >  2:210712/1‑79 (MQ=255)

                                                                                               aGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCg                                                                                                                         <  1:210712/79‑1 (MQ=255)

                                                                                                  cAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGaaa                                                                            <  4:36288/121‑1 (MQ=255)

                                                                                                  cAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGaaa                                                                            >  3:36288/1‑121 (MQ=255)

                                                                                                      gTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑ggg                                                                                                                             <  3:198710/68‑1 (MQ=255)

                                                                                                      gTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑ggg                                                                                                                             >  4:198710/1‑68 (MQ=255)

                                                                                                      gTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCA‑CACGCCGAAATCCACCTTGcc                                                                 >  1:315249/1‑127 (MQ=255)

                                                                                                      gTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCA‑CACGCCGAAATCCACCTTGcc                                                                 <  2:315249/127‑1 (MQ=255)

                                                                                                             gCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCgg                                     >  7:226187/1‑149 (MQ=255)

                                                                                                             gCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCgg                                     >  7:230180/1‑149 (MQ=255)

                                                                                                               gACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTATTCGGCGTTGGGCACCACGCCGAAATACACCTTGCCCAGCTCGATCGCCTGGCCCCCTTCGCGGCt                                   >  1:287324/1‑149 (MQ=255)

                                                                                                                 ctgtattgggtcggcctgcctgggcacggcccAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGcc                                                                                >  5:214803‑M2/33‑102 (MQ=255)

                                                                                                                 ctgtattgggtcggcctgcctgggcacggcccAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGcc                                                                                <  6:214803‑M2/70‑1 (MQ=255)

                                                                                                                 ctgtattgggtcggcctgcctgggcacggcccAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCAc                                                                       <  2:256217‑M2/79‑1 (MQ=255)

                                                                                                                 cTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCt                                   >  6:360716/1‑147 (MQ=255)

                                                                                                                  tgtattgggtcggcctgcctgggcacggcccAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAg                                >  7:110777‑M2/32‑149 (MQ=255)

                                                                                                                  tCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAg                                >  8:178197/1‑149 (MQ=255)

                                                                                                                  tCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAg                                >  3:313249/1‑149 (MQ=255)

                                                                                                                    gTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGaaa                                                                            <  1:298536/103‑1 (MQ=255)

                                                                                                                    gTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGaaa                                                                            >  2:298536/1‑103 (MQ=255)

                                                                                                                    gTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAg                                <  5:360716/147‑1 (MQ=255)

                                                                                                                     tCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGc                                                                                                                            <  5:315597/54‑1 (MQ=255)

                                                                                                                     tCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGc                                                                                 >  7:296247/1‑97 (MQ=255)

                                                                                                                     tCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGc                                                                                 <  8:296247/97‑1 (MQ=255)

                                                                                                                     tCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTGGTGCCCAACGCCGaagaac                                                                         <  4:38875/105‑5 (MQ=38)

                                                                                                                     tCAGGGCAGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGc                                                                                                                            >  6:315597/1‑54 (MQ=255)

                                                                                                                          GCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATccc                        >  5:326465‑M1/1‑149 (MQ=255)

                                                                                                                           ccGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATccc                        >  3:223083/1‑148 (MQ=255)

                                                                                                                                 ccAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGc                                                <  6:99125/118‑1 (MQ=255)

                                                                                                                                 ccAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGc                                                >  5:99125/1‑118 (MQ=255)

                                                                                                                                  caggcaggCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGcc                                                    >  6:228422/1‑113 (MQ=255)

                                                                                                                                   cctgggcacggcccAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTg                <  8:110777‑M2/134‑1 (MQ=255)

                                                                                                                                   aggcaggcCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGt                 >  2:175704/1‑147 (MQ=255)

                                                                                                                                     gcaggcCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGc             <  6:272822/149‑1 (MQ=255)

                                                                                                                                         gcCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGa         >  6:344813/1‑149 (MQ=255)

                                                                                                                                         gcCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCACCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGt                 >  6:99757/1‑141 (MQ=255)

                                                                                                                                         gcCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCACCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGt                 <  5:99757/141‑1 (MQ=255)

                                                                                                                                            gACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCAcc                                                                      >  4:263833/1‑85 (MQ=255)

                                                                                                                                            gACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCAcc                                                                      <  3:263833/85‑1 (MQ=255)

                                                                                                                                             aCCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGt                 <  7:9359/137‑1 (MQ=255)

                                                                                                                                               ccAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGt                 <  4:301188‑M2/133‑1 (MQ=255)

                                                                                                                                               ccAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATccc     >  1:134400‑M2/3‑147 (MQ=255)

                                                                                                                                               ccAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCg   >  2:211519‑M2/3‑149 (MQ=255)

TCCAGTGTCACACCGGTTTCCATGGCAGCCTGCTCGATGCGCCTGCGCAAGTGCAGGCTACGGGGTGGCATTACCAGGCGGCTCGCTGCGGCTTCAGCCAAGGTGATGGGCGACTCGTCAGGGCCGTGCCCAGGCAGGCCGACCCAATACAGGTCTTCGGAAAACAC‑GGGCTCGGCGACCACATGGACAAGTTCTTCGGCGTTGGGCACCACGCCGAAATCCACCTTGCCCAGCTCGATCGCCTGGCCACCTTCGCGGCTCAGGCCATCCCAAACGGTGAGCTTGATCCCCGG  >  NC_002947/2320597‑2320889

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.