New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2912904 = | 54 (1.020) | 3 (0.060) | 3/244 | NT | 5.6% | coding (1924/10827 nt) | PP_2561 | hemolysin‑type calcium‑binding bacteriocin |
? | NC_002947 | 2912950 = | 50 (0.990) | coding (1970/10827 nt) | PP_2561 | hemolysin‑type calcium‑binding bacteriocin |
TTACCCGCCAGGTGGGCAACGAGATTGACGAGTTCGTCACCGAAGCCCTGCGCAACAACCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGATCAACTTCATTGCCGCCTACGGCACCCACAGCAGCATTACCGGGGCCAC > NC_002947/2912803‑2913088 | ttACCCGCCAGGTGGGCAACGAGATTGACGAGTTCGTCACCGAAGCCCTGCGCAACAACCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAg > 3:307846/1‑149 (MQ=255) aCCCGCCAGGTGGGCAACGAGATTGACGAGTTCGTCACCGAAGCCCTGCGCAACAACCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGt > 3:301373/1‑148 (MQ=255) gcgacgccgggtgcttgaggtggtcggcaaagtcgacccagctcatgtagggcttgagctggctgtcgccggtggcggcatagaactCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGt > 6:144784‑M1/88‑136 (MQ=255) gcgacgccgggtgcttgaggtggtcggcaaagtcgacccagctcatgtagggcttgagctggctgtcgccggtggcggcatagaactCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGt < 5:144784‑M1/49‑1 (MQ=255) actagaTTGACGAGTTCGTCACCGAAGCCCTGCGCAACAACCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCACGCCGCGAGTTCTATGCCGCCACCGGc < 7:236193/146‑1 (MQ=255) gaTTGACGAGTTCGTCACCGAAGCCCTGCGCAACAACCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGa > 2:224047/1‑147 (MQ=255) aCGAGTTCGTCACCGAAGCCCTGCGCAACAACCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCt < 8:180886/126‑1 (MQ=255) aCGAGTTCGTCACCGAAGCCCTGCGCAACAACCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCt > 7:180886/1‑126 (MQ=255) ttgaggtggtcggcaaagtcgacccagctcatgtagggcttgagctggctgtcgccggtggcggcatagaactCGCGGTCGTGATACCGGCATCCCCAGCCTGAACAAGGCCCGCCGCGAGTTCTATg < 1:137085‑M1/55‑1 (MQ=255) aGTTCGTCACCGAAGCCCTGCGCAACAACCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCt > 2:225299/1‑148 (MQ=255) ttCGTCACCGAAGCCCTGCGCAACAACCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCaa < 1:225299/149‑1 (MQ=255) ccGAAGCCCTGCGCAACAACCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTa > 8:143967/1‑148 (MQ=255) cGAAGCCCTGCGCAACAACCTGCTCGGCCTGCCACTAGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGAcagc < 5:32060/133‑1 (MQ=255) cGAAGCCCTGCGCAACAACCTGCTCGGCCTGCCACTAGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGAcagc > 6:32060/1‑133 (MQ=255) aGCCCTGCGCAACAACCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGa < 7:143967/149‑1 (MQ=255) gcgcAACAACCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGa > 7:228004/1‑99 (MQ=255) gcgcAACAACCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGa < 8:228004/99‑1 (MQ=255) cgcAACAACCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATTCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTgg < 3:80404/147‑1 (MQ=255) cgcAACAACCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTgg < 4:301373/147‑1 (MQ=255) gcAACAACCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTc < 4:307846/149‑1 (MQ=255) aacaacCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTgg > 2:84128/1‑144 (MQ=255) aacaacCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTgg < 1:84128/144‑1 (MQ=255) aacaacCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGa > 1:64265/1‑149 (MQ=255) aacCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTc > 7:38186/1‑144 (MQ=255) aacCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTc < 8:38186/144‑1 (MQ=255) ccTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTg < 2:64265/149‑1 (MQ=255) ggCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACtt < 8:130983/140‑1 (MQ=255) ggCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACtt > 7:130983/1‑140 (MQ=255) tGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCt > 5:218133/1‑148 (MQ=255) gCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTc > 5:170060/1‑148 (MQ=255) ccACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCaa < 6:170060/149‑1 (MQ=255) cACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAg > 3:197349/1‑149 (MQ=255) aCTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCACGCCCTACATGAGCTGCGTCGACTTTGCCGACCACCTCCAg > 8:258607/1‑148 (MQ=255) aCTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGac < 6:123529/139‑1 (MQ=255) aCTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGac > 5:123529/1‑139 (MQ=255) aCTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGc < 6:218133/149‑1 (MQ=255) cctgcctgCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGac < 2:32032/133‑1 (MQ=255) cctgcctgCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGac > 1:32032/1‑133 (MQ=255) ctgcctgcGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGc > 8:273401/1‑87 (MQ=255) ctgcctgcGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGc < 7:273401/87‑1 (MQ=255) gcctgcGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGt > 5:138931/1‑149 (MQ=255) gcgcTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACa > 5:64243/1‑103 (MQ=255) gcgcTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACa < 6:64243/103‑1 (MQ=255) catagaactcgcggcgggccttgttcaggctggggatgccggtatcacgaccgcgAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCaa < 1:137085‑M2/73‑1 (MQ=255) cATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGa > 7:203381/1‑143 (MQ=255) cATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGa < 8:203381/143‑1 (MQ=255) aTCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGATCAACt > 7:146533/1‑148 (MQ=255) tCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGATCAACtt > 3:9597/1‑148 (MQ=255) actcgcggcgggcctcgttcaggctggggatgccggtatcacgaccgcgAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGc > 6:144784‑M2/50‑136 (MQ=255) actcgcggcgggcctcgttcaggctggggatgccggtatcacgaccgcgAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGc < 5:144784‑M2/87‑1 (MQ=255) ccGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGac > 5:212933/1‑112 (MQ=255) ccGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGac < 6:212933/112‑1 (MQ=255) GCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGATCAACTTCATTgcc > 4:9597‑M1/1‑149 (MQ=255) gATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGATCAACTTCATTGCCGCCTACgg > 4:268630/1‑149 (MQ=255) aTACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACGGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGATCAACTTCATTGCCGCCTACgg < 7:258607/148‑1 (MQ=255) cccAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGATCAACTTCATTGCCGCCTACGGCACCCAcagcag > 7:195943/1‑149 (MQ=255) ccAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGATCAACTTCATTGCCGCCTACGGCACCCAcagcag > 1:142001/1‑148 (MQ=255) ccAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGATCAACTTCATTGCCGCCTACGGCACCCACagcagc < 3:268630/149‑1 (MQ=255) aCGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGATCAACTTCATTGCCGCCTACGGCACCCACAGCAGCATTACCggg < 8:146533/149‑1 (MQ=255) aCGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGATCAACTTCATTGCCGCCTACGGCACCCACAGCAGCATTACCggg < 1:224047/149‑1 (MQ=255) aCGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGATCAACTTCATTGCCGCCTACGGCACCCACAGCAGCATTACCggg < 6:138931/149‑1 (MQ=255) gCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGATCAACTTCATTGCCGCCTACGGc < 2:117615/123‑1 (MQ=255) gCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGATCAACTTCATTGCCGCCTACGGc > 1:117615/1‑123 (MQ=255) gCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGATCAACTTCATTGCCGCCTACGGCACCCACAGCAGCATTACCGGGGccac < 8:195943/149‑1 (MQ=255) | TTACCCGCCAGGTGGGCAACGAGATTGACGAGTTCGTCACCGAAGCCCTGCGCAACAACCTGCTCGGCCTGCCACTTGACCTGCCTGCGCTGAACATCGCCCGCGGTCGTGATACCGGCATCCCCAGCCTGAACGAGGCCCGCCGCGAGTTCTATGCCGCCACCGGCGACAGCCAGCTCAAGCCCTACATGAGCTGGGTCGACTTTGCCGACCACCTCAAGCACCCGGCGTCGCTGATCAACTTCATTGCCGCCTACGGCACCCACAGCAGCATTACCGGGGCCAC > NC_002947/2912803‑2913088 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |