New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4274606	49 (0.930)	4 (0.080)	4/242	NT	7.9%	coding (563/1500 nt)	glcD	glycolate oxidase FAD‑linked subunit
	?	NC_002947	= 4274653	46 (0.910)					coding (610/1500 nt)	glcD	glycolate oxidase FAD‑linked subunit

GATCGGTGGCAACGTCGCCGAAAACGCCGGTGGCGTGCACTGCCTCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGCCCCAGGTGGCGCGGGTGATACTGGCCAGTTTCGACAGCGTCGAGGACGCCGGCCGGGCAGTCGCCGA  >  NC_002947/4274508‑4274801                                                                                                                                                  |                                                                                                                                                     gATCGGTGGCAACGTCGCCGAAAACGCCGGTGGCGTGCACTGCCTCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTtc                                                                                                                                                    >  1:212780‑M2/1‑146 (MQ=255) gATCGGTGGCAACGTCGCCGAAAACGCCGGTGGCGTGCACTGCCTCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTtc                                                                                                                                                    >  4:290834‑M2/1‑146 (MQ=255)   tCGGTGGCAACGTCGCCGAAAACGCCGGTGGCGTGCACTGCCTCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTtcgac                                                                                                                                                 >  6:31888‑M2/1‑144 (MQ=255)         gCAACGTCGCCGAAAACGCCGGTGGCGTGCACTGCCTCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTtcgac                                                                                                                                                 <  1:200253‑M2/143‑6 (MQ=255)         gCAACGTCGCCGAAAACGCCGGTGGCGTGCACTGCCTCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTtcgac                                                                                                                                                 >  2:200253‑M2/1‑138 (MQ=255)              gTCGCCGAAAACGCCGGTGGCGTGCACTGCCTCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCAtt                                                                                                                                      <  3:345861/149‑1 (MQ=255)                   cGAAAACGCCGGTGGCGTGCACTGCCTCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCa                                                                                                                                 >  3:160042/1‑149 (MQ=255)                    gAAAACGCCGGTGGCGTGCACTGCCTCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCAt                                                                                                                                >  3:65908/1‑149 (MQ=255)                     aaaaCGCCGGTGGCGTGCACTGCCTCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATc                                                                                                                               >  6:221635/1‑149 (MQ=255)                                 gCGTGCACTGCCTCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGc                                                                                                                   <  2:242329/149‑1 (MQ=255)                                           ccTCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAg                                                                                                                     >  5:57123/1‑137 (MQ=255)                                           ccTCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAg                                                                                                                     <  6:57123/137‑1 (MQ=255)                                             tCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGt                                                                                                          >  5:186418/1‑146 (MQ=255)                                             tCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGt                                                                                                          <  6:186418/146‑1 (MQ=255)                                                 gTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCa                                                                                                   <  7:293762/149‑1 (MQ=255)                                                  tACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCAc                                                                                                  <  5:221635/149‑1 (MQ=255)                                                       ccTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTg                                                                                                                                     <  6:94064/109‑1 (MQ=255)                                                              gTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGt                                                                                      >  7:145325/1‑149 (MQ=255)                                                              gTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCACGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCAt                                                                                                                 <  1:200037/122‑1 (MQ=255)                                                              gTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCACGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCAt                                                                                                                 >  2:200037/1‑122 (MQ=255)                                                               tACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGt                                                                                      >  5:336448/1‑148 (MQ=255)                                                                  acaATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAg                                                                                  <  4:160042/149‑1 (MQ=255)                                                                  acaATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAg                                                                                  >  2:296966/1‑149 (MQ=255)                                                                    aaTGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGt                                                                                                                                    <  2:141467/97‑1 (MQ=255)                                                                    aaTGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCG‑AGGCATGCTCGGTATCGTCACCGAAGTCAcc                                                                                        <  2:95274/140‑1 (MQ=255)                                                                    aaTGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCG‑AGGCATGCTCGGTATCGTCACCGAAGTCAcc                                                                                        >  1:95274/1‑140 (MQ=255)                                                                        tgCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGctgctg                                                                            <  4:65908/149‑1 (MQ=255)                                                                             aaGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGccc                                                                         >  1:136018/1‑147 (MQ=255)                                                                             aaGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCaa                                                                       <  6:336448/149‑1 (MQ=255)                                                                              aGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAg                                                                                                                     >  6:327986/1‑102 (MQ=255)                                                                              aGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAg                                                                                                                     <  5:327986/102‑1 (MQ=255)                                                                                   caCATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGCCCCa                                                                 <  1:296966/148‑1 (MQ=255)                                                                                    aCATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGCCCCAg                                                                >  7:1034/1‑149 (MQ=255)                                                                                         cTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTTGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGccc                                                                   <  7:48573/141‑1 (MQ=255)                                                                                         cTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCAAAGccc                                                                   >  8:48573/1‑141 (MQ=255)                                                                                          ttACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTtcgaccgtaaggatgtccaccttgagcacattgtgtacggtcaggccgtacttgaggcagtgcacgccaccggcgttttcggcgacgttgc                                                           <  3:179431‑M2/148‑92 (MQ=255)                                                                                          ttACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCAc                                                                                         >  1:64543/1‑118 (MQ=255)                                                                                          ttACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCAc                                                                                         <  2:64543/118‑1 (MQ=255)                                                                                           tACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGCCCCAGGTGgcgc                                                         >  1:339438/1‑149 (MQ=255)                                                                                            aCGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGCCCCAGGTGgcgc                                                         <  8:145325/148‑1 (MQ=255)                                                                                              ggTCGAGTGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTtcgaccgtaaggatgtccaccttgagcacattgtgtacggtcaggccgtacttgaggcagtgcacgccaccggcgttttcggcgacgtt                                                             <  4:285955‑M2/142‑90 (MQ=255)                                                                                              ggTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTtcgaccgtaaggatgtccaccttgagcacattgtgtacggtcaggccgtacttgaggcagtgcacgccaccggcgttttcggcgacgtt                                                             >  3:285955‑M2/1‑53 (MQ=255)                                                                                                        gAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGCCCCAGGTGGCGCGGGTGATACTGGc                                            >  6:181126/1‑149 (MQ=255)                                                                                                                 aGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGCCCCAGGTGGCGCGGGTGATACTGGCCAGTTTc                                     <  8:1034/147‑1 (MQ=255)                                                                                                                   ccTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGCCCCAg                                                                <  4:244484/118‑1 (MQ=255)                                                                                                                   ccTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGCCCCAg                                                                >  3:244484/1‑118 (MQ=255)                                                                                                                     tGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGccc                                                                   <  6:360328/113‑1 (MQ=255)                                                                                                                     tGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGccc                                                                   >  5:360328/1‑113 (MQ=255)                                                                                                                       ggCAGCGATGCCCTGGACAGCCCCGGCTtcgaccgtaaggatgtccaccttgagcacattgtgtacggtcaggccgtacttgaggcagtgcacgccaccggcgttttcggcgacgttgccaccgatcgagcaggcaatttgcgaggaag                             >  4:179431‑M2/1‑28 (MQ=255)                                                                                                                          aGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAg                                                                                  >  7:281730/1‑93 (MQ=255)                                                                                                                          aGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAg                                                                                  <  8:281730/93‑1 (MQ=255)                                                                                                                                  ccTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGCCCCAGGTGGCGCGGGTGATACTGGCCAGTTTCGACAGc                               >  5:116077/1‑136 (MQ=255)                                                                                                                                  ccTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGCCCCAGGTGGCGCGGGTGATACTGGCCAGTTTCGACAGc                               >  5:146515/1‑136 (MQ=255)                                                                                                                                  ccTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGCCCCAGGTGGCGCGGGTGATACTGGCCAGTTTCGACAGc                               <  6:146515/136‑1 (MQ=255)                                                                                                                                  ccTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGCCCCAGGTGGCGCGGGTGATACTGGCCAGTTTCGACAGc                               <  6:116077/136‑1 (MQ=255)                                                                                                                                                  ttCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGACCCAGGTGGCGCGGGTGATACTGGCCAGTTTCGACAGCGTCGAGGACGCCGGCCGCGCAGTCGCCGa  >  5:207405/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                     GATCGGTGGCAACGTCGCCGAAAACGCCGGTGGCGTGCACTGCCTCAAGTACGGCCTGACCGTACACAATGTGCTCAAGGTGGACATCCTTACGGTCGAGGGCGAACGCCTGAGCCTGGGCAGCGATGCCCTGGACAGCCCCGGCTTCGACCTGCTGGCATTGTTCATCGGCTCCGAAGGCATGCTCGGTATCGTCACCGAAGTCACCGTCAAGCTGCTGCCCAAGCCCCAGGTGGCGCGGGTGATACTGGCCAGTTTCGACAGCGTCGAGGACGCCGGCCGGGCAGTCGCCGA  >  NC_002947/4274508‑4274801

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.