New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5770663	36 (0.680)	4 (0.080)	4/238	NT	11.0%	coding (209/4716 nt)	PP_5060	hypothetical protein
	?	NC_002947	= 5770682	31 (0.630)					coding (190/4716 nt)	PP_5060	hypothetical protein

GGGGCGGGTTCAGGCTAAGGCGGTAGTCGCCCGCCGGGGCGAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCATGACCTGTTCGCCTACGACCTGACGGAGCGTGGGACGGCTGGCGAACTGGGCGGCGACTGCGTGATTGAGGTT  >  NC_002947/5770541‑5770820                                                                                                                                              |                                                                                                                                           ggggCGGGTTCAGGCTAAGGCGGTAGTCGCCCGCCGGGGCGAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGtgcagcc                                                                                                                                     <  4:147577‑M2/149‑8 (MQ=255)   ggCGGGTTCAGGCTAAGGCGGTAGTCGCCCGCCGGGGCGAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGa                                                                                                                                   <  1:125053/149‑1 (MQ=255)   ggCGGGTTCAGGCTAAGGCGGTAGTCGCCCGCCGGGGCGAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGa                                                                                                                                   <  2:337732/149‑1 (MQ=255)    gCGGGTTCAGGCTAAGGCGGTAGTCGCCCGCCGGGGCGAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAg                                                                                                                                  >  4:336962/1‑149 (MQ=255)     cGGGTTCAGGCTAAGGCGGTAGTCGCCCGCCGGGGCGAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAgg                                                                                                                                 <  5:211813/149‑1 (MQ=255)             ggCTAAGGCGGTAGTCGCCCGCCGGGGCGAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCAttt                                                                                                                           >  7:147621/1‑147 (MQ=255)               cTAAGGCGGTAGTCGCCCGCCGGGGCGAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAgg                                                                                                                       <  3:147577/149‑1 (MQ=255)                tAAGGCGGTAGTCGCCCGCCGGGGCGAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAggg                                                                                                                      >  3:178981/1‑149 (MQ=255)                        tAGTCGCCCGCCGGGGCGAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCAc                                                                                                              <  3:299056/149‑1 (MQ=255)                          gTCGCCCGCCGGGGCGAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACg                                                                                                             <  4:90277/148‑1 (MQ=255)                                  ccgGGGCGAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTTAGGGCGATGCACGCCAACCaga                                                                                                    <  7:220602/149‑1 (MQ=255)                                         gAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGt                                                                                             >  2:345048/1‑149 (MQ=255)                                          aGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTg                                                                                            <  8:147621/149‑1 (MQ=255)                                                          ccGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATc                                                                                  <  6:112768/143‑1 (MQ=255)                                                          ccGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATc                                                                                  >  5:112768/1‑143 (MQ=255)                                                             cAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCAt                                                                          >  6:127839/1‑148 (MQ=255)                                                               aGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCATGAc                                                                       <  5:127839/149‑1 (MQ=255)                                                                             cacaACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCATGACCTGTTCGCCTACGa                                                         >  4:126732/1‑149 (MQ=255)                                                                                aacaTCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCATGACCTGTTCGCCTACGACCt                                                      >  2:210251/1‑149 (MQ=255)                                                                                aacaTCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCATGACCTGTTCGCCTACGACCt                                                      >  1:120490/1‑149 (MQ=255)                                                                                  caTCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGAt                                                                                   >  8:270726/1‑118 (MQ=255)                                                                                  caTCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCAt                                                                          <  4:221942/127‑1 (MQ=255)                                                                                  caTCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCAt                                                                          >  3:221942/1‑127 (MQ=255)                                                                                      caccaGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCATGACCTGTTCGCCTACGACCTGACGGa                                                <  1:345048/149‑1 (MQ=255)                                                                                           gCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATc                                                                                  <  8:162321/110‑1 (MQ=255)                                                                                           gCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATc                                                                                  >  7:162321/1‑110 (MQ=255)                                                                                              gCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCATGACCTGTTCGCCTACGACCTGACGGAGCGTGGGa                                        <  3:336962/149‑1 (MQ=255)                                                                                                         cAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGtgcagccggatggtgtctggcgccctcagccgctggtggatgttgtgctgcaggccctgcttgcggctaaaccactggacctcgccccggcgggcgactaccgccttagcc                             <  7:275311‑M2/149‑112 (MQ=255)                                                                                                            acacCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCATGACCTGTTCGcc                                                              >  5:113166/1‑113 (MQ=255)                                                                                                            acacCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCATGACCTGTTCGcc                                                              <  6:113166/113‑1 (MQ=255)                                                                                                             cacCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCATGACCTGTTCGCCTACGACCTGACGGAGCGTGGGACGGCTGGCGAACTgg                         <  1:210251/149‑1 (MQ=255)                                                                                                                 aTCCGGCTGCAGGGACATCAGGTACAGCGGtgcagccggatggtgtctggcgccctcagccgctggtggatgttgtgctgca                                                                                        <  4:121372‑M2/82‑53 (MQ=255)                                                                                                                 aTCCGGCTGCAGGGACATCAGGTACAGCGGtgcagccggatggtgtctggcgccctcagccgctggtggatgttgtgctgca                                                                                        >  3:121372‑M2/1‑30 (MQ=255)                                                                                                                     ggCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCATGACCTGTTCGCCTACGACCTGACGGAGCGTGGGACGGCTGGCGAACTg                          <  6:180079/140‑1 (MQ=255)                                                                                                                     ggCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCATGACCTGTTCGCCTACGACCTGACGGAGCGTGGGACGGCTGGCGAACTg                          >  5:180079/1‑140 (MQ=255)                                                                                                                      gCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCATGACCTGTTCGCCTACGACCTGACGGAGCGTGGGACGGCTGGCGAACTGGGCGGCGACt                <  1:8333/149‑1 (MQ=255)                                                                                                                          cAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCATGACCTGTTCGCCTACGACCTGACGGTGCGTGGGACGGCTGGCGAACTGGGCGGCGACTGCGt            <  2:120490/149‑1 (MQ=255)                                                                                                                          cAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCATGACCTGTTCGCCTACGACCTGACGGAGCGTGGGACGGCTGGCGAACTGGGCGGCGACTGc              <  3:126732/147‑1 (MQ=255)                                                                                                                                    aGGTACAGCGGtgcagccggatggtgtctggcgccctcagccgctggtggatgttgtgctgcaggccctgcttgcggctaaaccactggacctcgccccggcgggcgactaccgccttagcctgaacccgccccggcgctttttcgcc   >  8:275311‑M2/1‑11 (MQ=255)                                                                                                                                    aGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCATGACCTGTTCGCCTACGACCTGACGGAGCGTGGGACGGCTGGCGAACTGGGCGGCGACTGCGTGATTGAGGtt  <  4:178981/149‑1 (MQ=255)                                                                                                                                              |                                                                                                                                           GGGGCGGGTTCAGGCTAAGGCGGTAGTCGCCCGCCGGGGCGAGGTCCAGTGGTTTAGCCGCAAGCAGGGCCTGCAGCACAACATCCACCAGCGGCTGAGGGCGCCAGACACCATCCGGCTGCAGGGACATCAGGTACAGCGGTGCAGCCGAGGTCATTTCAGGGCGATGCACGCCAACCAGAGGATAGTGCTCCAGGATCACCTTCATGACCTGTTCGCCTACGACCTGACGGAGCGTGGGACGGCTGGCGAACTGGGCGGCGACTGCGTGATTGAGGTT  >  NC_002947/5770541‑5770820

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.