Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,078,139	C→T	6.2%	G376E (GGG→GAG)	PP_2688 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,078,139	0	C	T	6.2%	188.2 / 2.3	64	G376E (GGG→GAG)	PP_2688	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (30/30);  new base T (2/2);  total (32/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.28e-01

GCGCAGGTCGATGTGACGCGGTGCGATGCCGCTGTCGACGAAGGTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAA  >  NC_002947/3077991‑3078283                                                                                                                                                     |                                                                                                                                                 gcgcAGGTCGATGTGACGCGGTGCGATGCCGCTGTCGACGAAGGTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGcc                                                                                                                                                  <  2:117186/149‑1 (MQ=255)        tCGATGTGACGCGGTGCGATGCCGCTGTCGACGAAGGTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCaa                                                                                                                                           >  6:195016/1‑149 (MQ=255)           aTGTGACGCGGTGCGATGCCGCTGTCGACGAAGGTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACAt                                                                                                                                        <  4:97276/149‑1 (MQ=255)                aCGCGGTGCGATGCCGCTGTCGACGAAGGTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCa                                                                                                                                    >  8:60342/1‑148 (MQ=255)                aCGCGGTGCGATGCCGCTGTCGACGAAGGTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCAt                                                                                                                                   <  5:208068/149‑1 (MQ=255)                 cgcgGTGCGATGCCGCTGTCGACGAAGGTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATa                                                                                                                                  <  5:195016/149‑1 (MQ=255)                  gcgGTGCGATGCCGCTGTCGACGAAGGTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGGGCCCGCCTCGACCaaag                                                                                                                                         >  6:19148/1‑139 (MQ=255)                  gcgGTGCGATGCCGCTGTCGACGAAGGTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGGGCCCGCCTCGACCaaag                                                                                                                                         <  5:19148/141‑3 (MQ=255)                    ggTGCGATGCCGCTGTCGACGAAGCTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCGTCGATCTGGGCTTTGGTCGAGGCGGGCCCGCCCAACATGCCATAgcc                                                                                                                               >  2:54237/1‑149 (MQ=255)                          aTGCCGCTGTCGACGAAGGTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAATATGCCATAGCCGCCGGa                                                                                                                         <  3:222909/149‑1 (MQ=255)                                   tCGACGAAGGTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACAt                                                                                                                                        >  7:271027/1‑125 (MQ=255)                                   tCGACGAAGGTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACAt                                                                                                                                        <  8:271027/125‑1 (MQ=255)                                   tCGACGAAGGTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTggg                                                                                                                 <  7:60342/148‑1 (MQ=255)                                     gacgaAGGTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGtt                                                                                                               >  8:237276/1‑148 (MQ=255)                                        gaAGGTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATACCATAGCCGCCGGAGCCCTGGGTTTCCt                                                                                                           >  4:5683/1‑149 (MQ=255)                                           ggTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGa                                                                                                        >  1:211943/1‑149 (MQ=255)                                            gTCGGGCAGGTCGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTg                                                                                                         <  3:167108/147‑1 (MQ=255)                                            gTCGGGCAGGTAGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTg                                                                                                         >  4:167108/1‑147 (MQ=255)                                               gggCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGaccac                                                                                                    <  2:211943/149‑1 (MQ=255)                                                 gCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGAccacca                                                                                                  <  8:262758/149‑1 (MQ=255)                                                      ttGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGTCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCGATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCg                                                                                             <  1:54237/149‑1 (MQ=255)                                                         aCAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCggg                                                                                           >  3:76780/1‑148 (MQ=255)                                                          gaGGGACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGTGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCtt                                                                                                          <  2:298226/131‑1 (MQ=255)                                                          cAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGCAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCAAAGCCGCCGGAGCCCTGGGTTTCCtt                                                                                                          >  1:298226/1‑132 (MQ=255)                                                            ggCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAgg                                                                                       >  8:331644/1‑149 (MQ=255)                                                             gCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACa                                                                                                                                         <  8:75044/98‑1 (MQ=255)                                                             gCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACa                                                                                                                                         >  7:75044/1‑98 (MQ=255)                                                             gCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCtt                                                                                                          <  8:128549/129‑1 (MQ=255)                                                             gCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCtt                                                                                                          >  7:128549/1‑129 (MQ=255)                                                             gCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGt                                                                                      >  4:335198/1‑149 (MQ=255)                                                               acaGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCgg                                                                                            >  4:213742/1‑141 (MQ=255)                                                               acaGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCgg                                                                                            <  3:213742/141‑1 (MQ=255)                                                                 aGCGTCGGTTGAGCGATATAGGCTTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGc                                                                                  <  7:237276/149‑1 (MQ=255)                                                                     tCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGaccac                                                                                                    <  4:128126/127‑1 (MQ=255)                                                                     tCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGaccac                                                                                                    <  4:223894/127‑1 (MQ=255)                                                                     tCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGaccac                                                                                                    >  3:223894/1‑127 (MQ=255)                                                                     tCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGaccac                                                                                                    >  3:128126/1‑127 (MQ=255)                                                                         ttGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACAt                                                                          >  3:101730/1‑149 (MQ=255)                                                                         ttGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACAt                                                                          >  2:246947/1‑149 (MQ=255)                                                                            aGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATgg                                                                        >  7:155326/1‑148 (MQ=255)                                                                                    aGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATcc                                                               >  6:236128/1‑149 (MQ=255)                                                                                        gTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATACCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATccgccg                                                           <  3:5683/149‑1 (MQ=255)                                                                                             ggcgggcTTTGCTGCGCGCGCGGAAGTCCTCGATCCGGGCTTTGGTCGTGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTg                                                      <  8:155326/149‑1 (MQ=255)                                                                                              gcgggcTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCa                                                                                >  7:244417/1‑122 (MQ=255)                                                                                                gggcTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCgg                                                   <  7:268279/149‑1 (MQ=255)                                                                                                    tttGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACt                                               >  1:166492/1‑149 (MQ=255)                                                                                                            gcgcgcgGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTc                                       >  5:3725/1‑149 (MQ=255)                                                                                                               cgcgGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGc                                    <  5:236128/149‑1 (MQ=255)                                                                                                                 cgGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGt                                        >  7:156662/1‑143 (MQ=255)                                                                                                                 cgGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGt                                        <  8:156662/143‑1 (MQ=255)                                                                                                                       tCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACgttgtt                            >  4:305507/1‑149 (MQ=255)                                                                                                                        ccTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATccgccg                                                           <  7:961/117‑1 (MQ=255)                                                                                                                        ccTCGATCTGGGCTTTGGTCCAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTCACCACCAGTTCGGGCAGCTGGGCCAGTACATGGGACAGATccgcag                                                           >  8:961/1‑115 (MQ=255)                                                                                                                         cTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTc                                       >  7:249022/1‑136 (MQ=255)                                                                                                                         cTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTc                                       <  8:249022/136‑1 (MQ=255)                                                                                                                         cTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTc                           <  6:197657/148‑1 (MQ=255)                                                                                                                         cTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTc                           >  5:197657/1‑148 (MQ=255)                                                                                                                         cTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGCACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCa                          <  1:246947/149‑1 (MQ=255)                                                                                                                            gATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAgg                        <  7:331644/148‑1 (MQ=255)                                                                                                                                      ttGGTCGGGCCCGCCTCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTc                           >  4:332656/1‑135 (MQ=255)                                                                                                                                      ttGGTCGGGCCCGCCTCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTc                           <  3:332656/135‑1 (MQ=255)                                                                                                                                       tGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGttcttc             <  4:101730/148‑1 (MQ=255)                                                                                                                                         gTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACAACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCATGCGGCACTGCCAGCTCGGCACGTTGTTCAGGATTGGTTCTTCGCt          >  2:114819/1‑149 (MQ=255)                                                                                                                                            gAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAg       <  3:305507/149‑1 (MQ=255)                                                                                                                                                 gggCCCGACCTACATGCCATATCCGCCGGAGCCCTGGGTTTCTTTGAGCACGAGTTCGGGCAGGTGGGCCAGTACATGTGACAGATCCGCCGGCTTGCGGCACTGACAGTTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTaaa  <  1:114819/149‑1 (MQ=255)                                                                                                                                                    cccGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGttctt              <  5:318912/134‑1 (MQ=255)                                                                                                                                                    cccGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGttctt              >  6:318912/1‑134 (MQ=255)                                                                                                                                                     |                                                                                                                                                 GCGCAGGTCGATGTGACGCGGTGCGATGCCGCTGTCGACGAAGGTCGGGCAGGTTGACAGGCACAGCGTCGGTTGAGCGATATAGGCGTGCGGGCGGGCTTTGATGCGCGCGCGGAAGTCCTCGATCTGGGCTTTGGTCGAGGCGGGCCCGACCAACATGCCATAGCCGCCGGAGCCCTGGGTTTCCTTGACCACCAGTTCGGGCAGGTGGGCCAGTACATGGGACAGATCCGCCGGCTTGCGGCACTGCCAGGTCGGCACGTTGTTCAGGATTGGTTCTTCGCTCAGGTAAA  >  NC_002947/3077991‑3078283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑