| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,914,853 | A→G | 7.6% | intergenic (‑67/‑179) | PP_3454 ← / → PP_3455 | transcriptional regulator/multidrug RND transporter membrane fusion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,914,853 | 0 | A | G | 7.6% | 187.2 / 4.7 | 66 | intergenic (‑67/‑179) | PP_3454/PP_3455 | transcriptional regulator/multidrug RND transporter membrane fusion protein |
| Reads supporting (aligned to +/- strand): ref base A (32/29); new base G (2/3); total (34/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 | |||||||||||
ATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAGCGTCTGCCTTA > NC_002947/3914706‑3915000 | aTGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAg > 5:247713/1‑149 (MQ=255)aTGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAg < 5:322943/149‑1 (MQ=255)aTGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAg > 2:73262/1‑149 (MQ=255) ggAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGt > 5:31523/1‑149 (MQ=255) ggAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGt > 1:71530/1‑149 (MQ=255) cAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTGAACCCGCTCCTACGGGGACCTGCAGCAGCggg < 1:33343/148‑1 (MQ=37) cAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTGAACCCGCTCCTACGGGGACCTGCAGCAGCggg < 7:163846/148‑1 (MQ=37) cAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCggg < 2:71530/148‑1 (MQ=255) aGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGtt > 8:298378/1‑149 (MQ=255) aGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGt > 3:42065/1‑148 (MQ=255) ggTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCgg > 2:181096/1‑145 (MQ=255) ggTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCgg < 1:181096/145‑1 (MQ=255) aGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCAcc > 7:132979/1‑149 (MQ=255) cTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCAccc < 1:73262/149‑1 (MQ=255) cTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCa < 6:247713/149‑1 (MQ=255) gcgcTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGccc < 7:298378/149‑1 (MQ=255) gcTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAaga > 7:146378/1‑132 (MQ=255) gcTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAaga < 2:342848/132‑1 (MQ=255) gcTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAaga > 1:342848/1‑132 (MQ=255) gcTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAaga < 8:146378/132‑1 (MQ=255) gcTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCAt > 8:83359/1‑149 (MQ=255) gtcTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCAcc > 1:201304/1‑118 (MQ=255) gtcTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCAcc < 2:201304/118‑1 (MQ=255) tcTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAat < 4:42065/149‑1 (MQ=255) cTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAaga < 7:27909/124‑1 (MQ=255) cTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAaga > 8:27909/1‑124 (MQ=255) ttCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAata > 7:150386/1‑148 (MQ=255) cGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAatat < 3:91773/147‑1 (MQ=255) cGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAata < 8:150386/146‑1 (MQ=255) aCCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGaa > 5:60432/1‑149 (MQ=255) cAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAAcc > 4:143026/1‑149 (MQ=255) cAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAAcc > 1:217690/1‑149 (MQ=255) aGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAAcc > 5:96247/1‑148 (MQ=255) gAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCaa > 5:328371/1‑149 (MQ=255) aaaaTGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAAc < 4:48871/149‑1 (MQ=255) ggCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACa < 3:328672/149‑1 (MQ=255) aGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAAtata > 5:118578/1‑126 (MQ=255) aGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAAtata < 6:118578/126‑1 (MQ=255) gTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCAt > 2:309340/1‑149 (MQ=255) gggCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAAccc < 6:312541/124‑1 (MQ=255) gggCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAAccc > 5:312541/1‑124 (MQ=255) gggCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTca < 8:132979/149‑1 (MQ=255) gCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTc > 3:250908/1‑130 (MQ=255) gCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTc < 4:250908/130‑1 (MQ=255) tGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACtttt > 7:164249/1‑149 (MQ=255) ggTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACttttt > 5:53579/1‑148 (MQ=255) ggTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACtttt < 6:328371/147‑1 (MQ=255) ggTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTc < 8:164249/149‑1 (MQ=255) gAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTcaca < 6:53579/148‑1 (MQ=255) gAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTcaca < 1:309340/148‑1 (MQ=255) aaGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACtt < 8:47670/140‑1 (MQ=255) aaGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACtt > 7:47670/1‑140 (MQ=255) aaGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGcc > 7:16967/1‑149 (MQ=255) aGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGcc < 2:217690/148‑1 (MQ=255) gCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGt < 3:143026/148‑1 (MQ=255) gAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTAt > 6:161059/1‑148 (MQ=255) cgcTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAAc < 6:60432/149‑1 (MQ=255) gcTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACa < 6:96247/149‑1 (MQ=255) cg‑cgGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAgccg > 6:17968/1‑149 (MQ=255) gtgaaCCCGCTCCTACGGGGACCTGCAGCAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACttttt < 6:68830/112‑1 (MQ=21) gtgaaCCCGCTCCTACGGGGACCTGCAGCAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACttttt > 5:68830/4‑115 (MQ=21) gtgaaCCCGCTCCTACGGGGACCTGCAGCAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCAGTCTTCACACTTTTACACACTCGCCCTACAGGTATTAAAAGCCGCCCAg > 8:243953/4‑149 (MQ=25) aCCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAg > 1:172522/1‑149 (MQ=255) cAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAGCGTCTGCCt > 4:195366/1‑147 (MQ=255) cAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAGCGTCTGCCt > 2:39097/1‑147 (MQ=255) cAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAGCGTCTGCCTTa < 5:161059/149‑1 (MQ=255) | ATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCG‑CGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAACCCAACCACTCGACAGGATCATTCTTCACACTTTTTCACACTCGCCCTACAGGTATTAACAGCCGCCCAGGCAGCGTCTGCCTTA > NC_002947/3914706‑3915000 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |