Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	406,031	C→G	5.4%	S9T (AGC→ACC)	PP_0337 ←	sensory box protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	406,031	0	C	G	5.4%	299.9 / 5.7	92	S9T (AGC→ACC)	PP_0337	sensory box protein
Reads supporting (aligned to +/- strand):  ref base C (43/44);  new base G (3/2);  total (46/46)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.79e-01

TCGCCGGTTTTCAGGCCGAACTGGCGCTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCT  >  NC_002947/405887‑406174                                                                                                                                                 |                                                                                                                                                tCGCCGGTTTTCAGGCCGAACTGGCGCTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTggc                                                                                                                                             >  5:114016/1‑149 (MQ=255)   gCCGGTTTTCAGGCCGAACTGGCGCTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCAGCCGTGTggcgg                                                                                                                                           >  8:230533/1‑149 (MQ=255)   gCCGGTTTTCAGGCCGAACTGGCGCTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTggcgg                                                                                                                                           >  8:45585/1‑149 (MQ=255)       gTTTTCAGGCCGAACTGGCGCTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATc                                                                                                                                       >  3:285048/1‑149 (MQ=255)       gTTTTCAGGCCGAACTGGCGCTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATc                                                                                                                                       <  3:180603/149‑1 (MQ=255)        ttttCAGGCCGAACTGGCGCTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCAGCCGTGTggcggccgag                                                                                                                                      <  7:230533/149‑5 (MQ=255)           tCAGGCCGAACTGGCGCTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGt                                                                                                                                   >  1:172121/1‑149 (MQ=255)               gCCGAACTGGCGCTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCa                                                                                                                                         >  6:269356/1‑139 (MQ=255)               gCCGAACTGGCGCTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCa                                                                                                                                         <  5:269356/139‑1 (MQ=255)               gCCGAACTGGCGCTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGc                                                                                                                               >  6:319719/1‑149 (MQ=255)               gCCGAACTGGCGCTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGc                                                                                                                               >  5:2563/1‑149 (MQ=255)                   aaCTGGCGCTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCtttt                                                                                                                           <  1:288034/149‑1 (MQ=255)                     cTGGCGCTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCa                                                                                                                         <  1:220156/149‑1 (MQ=255)                     cTGGCGCTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCa                                                                                                                         <  5:289486/149‑1 (MQ=255)                        gcgcTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATc                                                                                                                       >  8:220870/1‑148 (MQ=255)                          gcTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGaa                                                                                                                    <  6:2563/149‑1 (MQ=255)                          gcTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGaa                                                                                                                    <  6:114016/149‑1 (MQ=255)                           cTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCg                                                                                                                      >  3:51040/1‑146 (MQ=255)                           cTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGaa                                                                                                                    <  4:51040/148‑1 (MQ=255)                              acaGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGt                                                                                                                                   <  4:231008/130‑1 (MQ=255)                              acaGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGt                                                                                                                                   >  3:231008/1‑130 (MQ=255)                              acaGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATc                                                                                                                       >  5:58903/1‑142 (MQ=255)                              acaGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATc                                                                                                                       <  6:58903/142‑1 (MQ=255)                              acaGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGa                                                                                                                  <  2:226657/147‑1 (MQ=255)                              acaGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACt                                                                                                                >  3:236546/1‑149 (MQ=255)                                   cTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCAt                                                                                                                        >  6:297426/1‑136 (MQ=255)                                   cTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCAt                                                                                                                        <  5:297426/136‑1 (MQ=255)                                    tGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCtt                                                                                                           >  4:106409/1‑148 (MQ=255)                                      ggTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTg                                                                                                          <  8:305414/147‑1 (MQ=255)                                      ggTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGaa                                                                                                        <  5:319719/149‑1 (MQ=255)                                      ggTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGaa                                                                                                        <  6:302094/149‑1 (MQ=255)                                        tCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAaga                                                                                                      <  3:106409/149‑1 (MQ=255)                                          aaGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAgg                                                                                                    >  1:93163/1‑149 (MQ=255)                                            ggTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCAGCCGTGTggcgg                                                                                                                                           >  6:258788/1‑108 (MQ=255)                                             gTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCa                                                                                                                         <  3:177044/125‑1 (MQ=255)                                             gTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCa                                                                                                                         >  4:177044/1‑125 (MQ=255)                                                       gCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTtg                                                                                       >  2:309362/1‑149 (MQ=255)                                                        cccAGGTGGGTTCGTTGAGCCTTTCGAAACGCAGCTTGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTtgt                                                                                      <  2:172121/149‑1 (MQ=255)                                                        cccAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCtttt                                                                                                                           >  2:276494/1‑112 (MQ=255)                                                        cccAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCtttt                                                                                                                           <  1:276494/112‑1 (MQ=255)                                                        cccAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTtgt                                                                                      <  5:327038/149‑1 (MQ=255)                                                              tGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTgc                                                                                <  2:93163/149‑1 (MQ=255)                                                                gCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTgcgg                                                                              <  1:309362/149‑1 (MQ=255)                                                                  ttCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGaa                                                                                                                    >  5:16570/1‑109 (MQ=255)                                                                  ttCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGaa                                                                                                                    <  6:16570/109‑1 (MQ=255)                                                                        gAGCCTTTCGAAACGCAGCATGACGAGCCGCGAGGGAACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTCGGCTTTTCATCGAAGACTCGCTTGCAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTg                                                                      >  4:230634/1‑149 (MQ=255)                                                                         aGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTg                                                                      <  7:45585/148‑1 (MQ=255)                                                                          gCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTgg                                                                     >  1:137699/1‑148 (MQ=255)                                                                          gCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTAATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTgg                                                                     >  6:67773/1‑148 (MQ=255)                                                                             tttCGAAACGCAGCATCCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGCGAACGCGGCCTTGACGCTGCGGCGGATTTGCCAAg                                                                 >  8:310598/1‑149 (MQ=255)                                                                                  aaaCGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTg                                                                      >  4:296311/1‑139 (MQ=255)                                                                                  aaaCGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTg                                                                      <  3:296311/139‑1 (MQ=255)                                                                                  aaaCGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTg                                                             >  2:297574/1‑148 (MQ=255)                                                                                    aCGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCat                                                          <  4:285048/149‑1 (MQ=255)                                                                                    aCGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCat                                                          <  4:236546/149‑1 (MQ=255)                                                                                     cGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCat                                                          >  2:349291/1‑148 (MQ=255)                                                                                        agcaTGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCatgatg                                                      >  7:99497/1‑149 (MQ=255)                                                                                            tGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCATACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTccc                                                  <  5:321735/149‑1 (MQ=255)                                                                                              ccGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTccc                                                  >  5:629/1‑147 (MQ=255)                                                                                              ccGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGa                                                <  8:99497/149‑1 (MQ=255)                                                                                               cGAGCCGCGAGGGCACGGGTAACTGTGTCACGCCCTCGGCCGCCACACGGCTGGCGTCATCGTGTTGGCTTTTCATCGAATACTCGCTTGAATATGGAACGCGGCCTTGTGGCTGCGGCGGATTTCGCAAGGTTGCATGATGTCCCGa                                                <  7:220870/148‑1 (MQ=255)                                                                                                   cctcgAGGGCACGGGTAACTGGGTCACGACCTCGGCCGCCTCACGGCTGGCGGCTTCGGGTTGGCGTTTCATCGAAGACTCGCTTGAAGACGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGTGGGcg                                           <  2:243936/146‑2 (MQ=255)                                                                                                   ccGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCt                                           >  7:312330/1‑149 (MQ=255)                                                                                                    cgcgAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTg                                          <  5:67773/149‑1 (MQ=255)                                                                                                    cgcgAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTg                                          <  8:312330/149‑1 (MQ=255)                                                                                                     gcgAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTgg                                         >  6:341614/1‑149 (MQ=255)                                                                                                      cgAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTgg                                         >  4:145115/1‑148 (MQ=255)                                                                                                       gAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGc                                        >  5:277113/1‑148 (MQ=255)                                                                                                               gggTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTgg                                                                     <  4:148704/111‑1 (MQ=255)                                                                                                               gggTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTgg                                                                     >  3:148704/1‑111 (MQ=255)                                                                                                                 gTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCGTCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATg                             >  1:1040/1‑149 (MQ=255)                                                                                                                          tCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTg                                                             <  5:247471/108‑1 (MQ=255)                                                                                                                          tCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTg                                                             >  6:247471/1‑108 (MQ=255)                                                                                                                          tCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAggg                                             <  5:138454/124‑1 (MQ=255)                                                                                                                          tCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAggg                                             >  6:138454/1‑124 (MQ=255)                                                                                                                          tCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCt                    >  3:333920/1‑149 (MQ=255)                                                                                                                          tCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCt                    >  7:203822/1‑149 (MQ=255)                                                                                                                           cACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGa                                                                          <  2:277405/94‑1 (MQ=255)                                                                                                                           cACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGa                                                                          >  1:277405/1‑94 (MQ=255)                                                                                                                             cGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCtgtg                 <  3:41186/149‑1 (MQ=255)                                                                                                                             cGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCtgtg                 <  1:297574/149‑1 (MQ=255)                                                                                                                                 cTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGa               >  3:260066/1‑147 (MQ=255)                                                                                                                                  gatgccgccAGCCGTGTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATg                      <  4:344865/136‑1 (MQ=255)                                                                                                                                  gatgccgccAGCCGTGTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATg                      >  3:344865/4‑139 (MQ=255)                                                                                                                                    ggCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCtgtg                 <  2:46337/142‑1 (MQ=255)                                                                                                                                    ggCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCtgtg                 >  1:46337/1‑142 (MQ=255)                                                                                                                                    ggCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAg            <  6:277113/147‑1 (MQ=255)                                                                                                                                    ggCCGCCACACGGCTGGCGGCATCGGGTCGGCTTTTCATCGAAGACTCGCTTGAAGAGTGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGTTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAg            <  3:230634/147‑1 (MQ=255)                                                                                                                                           acacGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGc   <  1:349291/149‑1 (MQ=255)                                                                                                                                            cacGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCt  <  4:333920/149‑1 (MQ=255)                                                                                                                                             acGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAggg                                             >  2:263994/1‑105 (MQ=255)                                                                                                                                             acGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCt  >  7:92028/1‑148 (MQ=255)                                                                                                                                                 |                                                                                                                                                TCGCCGGTTTTCAGGCCGAACTGGCGCTCACAGGCTGGGTCAAGGTAGAGCATGGCCCAGGTGGCTTCGTTGAGCCTTTCGAAACGCAGCATGCCGAGCCGCGAGGGCACGGGTAACTGTGTCACGACCTCGGCCGCCACACGGCTGGCGGCATCGGGTTGGCTTTTCATCGAAGACTCGCTTGAAGAGGGAACGCGGCCTTGTGGCTGCGGCGGATTTGGCAAGGTTGCATGATGTCCCGAGGGCTGGCAAGCGGCCATGCTTGATGCTGTGGACAGGTTATCGGCT  >  NC_002947/405887‑406174

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑