| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,415,032 | T→C | 6.6% | intergenic (+141/+27) | PP_5644 → / ← PP_3899 | membrane protein/hicB family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,415,032 | 0 | T | C | 6.6% | 215.4 / 4.4 | 75 | intergenic (+141/+27) | PP_5644/PP_3899 | membrane protein/hicB family protein |
| Reads supporting (aligned to +/- strand): ref base T (37/33); new base C (3/2); total (40/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
GAGTAGATGGCTATGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTCACAT > NC_002947/4414886‑4415177 | gAGTAGATGGCTATGAAGCACTCCTCTTTAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCCACATGCATTCACGCTGTTTTCACGACCTCCCCTGAACAGTTAAGTCGCATCCCCTTCCCTACGTTAGCACGCATTg > 3:217135/1‑149 (MQ=255) gATGGCTATGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTg > 8:252351/1‑149 (MQ=255) tATGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCACTGCAATGCGGGc > 1:211055/1‑148 (MQ=255) tGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCACTGCAATGCGGGc < 2:211055/146‑1 (MQ=255) tGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCACTGCAATGCGGGCtaa < 3:87024/149‑3 (MQ=255) aaGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTc > 1:173039/1‑149 (MQ=255) ctTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGggcggc > 6:95721/1‑149 (MQ=255) gAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGggcggc < 7:320881/146‑1 (MQ=255) aGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTAcgc < 7:252351/149‑1 (MQ=255) gccgccATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCg > 2:118483/1‑125 (MQ=255) gccgccATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCg < 1:118483/125‑1 (MQ=255) cgccATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGtg < 6:355952/149‑1 (MQ=255) ccATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGtgat > 8:275234/1‑149 (MQ=255) aTCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGtgatga < 5:95721/149‑1 (MQ=255) tCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTAACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCACTGCAATGCggcc > 6:261921/1‑119 (MQ=255) cAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGAcc > 4:204887/1‑149 (MQ=255) gTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAg < 7:275234/149‑1 (MQ=255) tCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCtttt > 5:105138/1‑117 (MQ=255) tCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCtttt < 6:105138/117‑1 (MQ=255) ccACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAg > 2:265056/1‑143 (MQ=255) ccACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAg < 1:265056/143‑1 (MQ=255) ccACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACt > 8:64296/1‑148 (MQ=255) cacaGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCa < 7:64296/149‑1 (MQ=255) acaGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCAAAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCAc > 1:100980/1‑149 (MQ=255) gCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAgcgc > 2:34768/1‑149 (MQ=255) gCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAgcgc > 3:42305/1‑149 (MQ=255) ccTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGtgatga < 3:239508/128‑1 (MQ=255) ccTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGtgatga > 4:239508/1‑128 (MQ=255) cggcggGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTg > 4:116462/1‑149 (MQ=255) ggcggGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTg < 3:204887/148‑1 (MQ=255) cggGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCgt < 4:42305/149‑1 (MQ=255) gCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTc < 3:116462/149‑1 (MQ=255) cATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCAt > 8:206994/1‑149 (MQ=255) cATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCaa < 1:34768/149‑1 (MQ=255) aTTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGc < 2:190740/132‑1 (MQ=255) aTTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGc > 1:190740/1‑132 (MQ=255) aCGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCa < 2:325844/134‑1 (MQ=255) aCGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGaaa > 2:210893/1‑149 (MQ=255) aCGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGaaa > 1:81410/1‑149 (MQ=255) gCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCAAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAAt > 5:322944/1‑148 (MQ=255) cTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTc < 2:305541/130‑1 (MQ=255) cTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTc > 1:305541/1‑130 (MQ=255) ttttttCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACt > 7:90282/1‑149 (MQ=255) ttttttCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACt > 5:279483/1‑149 (MQ=255) cGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTtgg > 1:187768/1‑149 (MQ=255) gCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCacg > 8:217487/1‑130 (MQ=255) gCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACtt < 2:13334/141‑1 (MQ=255) gCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACtt > 1:13334/1‑141 (MQ=255) gCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTtggt < 1:210893/149‑1 (MQ=255) cccTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTc < 4:189308/123‑1 (MQ=255) cccTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTc > 3:189308/1‑123 (MQ=255) cacaGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTtggt > 6:519/1‑138 (MQ=255) cacaGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTtggt < 5:519/138‑1 (MQ=255) acaGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCt < 6:279483/149‑1 (MQ=255) tGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCt > 7:109360/1‑137 (MQ=255) tGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCt < 8:109360/137‑1 (MQ=255) ggCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTa < 2:100980/149‑1 (MQ=255) gCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGTAAATACTTTGCTTGGTGTCTga > 8:249856/1‑133 (MQ=255) aTCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTg < 6:68577/137‑1 (MQ=255) aTCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTg > 5:68577/1‑137 (MQ=255) aTCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTg > 6:73855/1‑148 (MQ=255) ccGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGa > 6:75881/1‑96 (MQ=255) ccGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGa < 5:75881/96‑1 (MQ=255) gCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGt > 4:257861/1‑149 (MQ=255) ccTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTg < 2:81410/148‑1 (MQ=255) ccTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGc < 7:206994/149‑1 (MQ=255) cTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGcc < 5:110382/130‑1 (MQ=255) cTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGcc > 6:110382/1‑130 (MQ=255) tACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGtcc > 6:167837/1‑149 (MQ=255) cGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCt < 6:322944/148‑1 (MQ=255) ttAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTAcc < 2:187768/149‑1 (MQ=255) aaGCCCGCACTGCAATGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTAccc > 5:245442/2‑149 (MQ=255) gCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTc < 5:73855/149‑1 (MQ=255) cccGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTca > 8:196418/1‑149 (MQ=255) gCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTCACAt < 7:196418/149‑1 (MQ=255) | GAGTAGATGGCTATGAAGCACTCCTCTTGAAGCCGCCATCAAGTGATCCCACAGTCCGCCTCGGCGGGCTTCACCATGCATTCACGCTTTTTTCACGCCCTCCCCTGCACAGTGAAGGCTCATCCGCTTCCCTACGTTAGCCCGCATTGCAGTGCGGGCTTTTCTTTGGGCGGCTACGCGTGATGACCCAGGTACTCACTAAGCGCTTTGCGTGTCAGATCATTCAAGGAAATACTTTGCTTGGTGGCTGCCACGCTGGCCGCTAGGTGCAGGTCGTGCCCTACCCTCACAT > NC_002947/4414886‑4415177 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |