Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 426,176 G→A 7.0% G541G (GGC→GGT PP_0350 ← ferrichrome‑iron receptor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947426,1760GA 7.0% 168.1 / 2.1 57G541G (GGC→GGTPP_0350ferrichrome‑iron receptor
Reads supporting (aligned to +/- strand):  ref base G (29/24);  new base A (2/2);  total (31/26)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.09e-01

CTCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCGTAGACCGGGTTGTTGACGTTG  >  NC_002947/426029‑426320
                                                                                                                                                   |                                                                                                                                                
cTCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGc                                                                                                                                                 >  2:299685/1‑149 (MQ=255)
      aTAGGACAGGTACGGCACGAAGCCCGAGTCCAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAggg                                                                                                                                           >  1:29997/1‑149 (MQ=255)
       tAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGt                                                                                                                                          <  5:283540/149‑1 (MQ=255)
                tACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCa                                                                                                                                 <  7:91379/149‑1 (MQ=255)
                                    gAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGt                                                                                                             >  6:358565/1‑149 (MQ=255)
                                    gAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCAAACAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGt                                                                                                             >  6:266129/1‑149 (MQ=255)
                                       cacGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCt                                                                                                          <  2:29997/149‑1 (MQ=255)
                                          gTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGca                                                                                                       >  1:151538/1‑149 (MQ=255)
                                          gTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGca                                                                                                       >  2:169702/1‑149 (MQ=255)
                                             gCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGcaca                                                                                                     <  1:299685/148‑1 (MQ=255)
                                               tGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATa                                                                                                   >  6:9813/1‑148 (MQ=255)
                                                 aTGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATAc                                                                                                  <  2:151538/147‑1 (MQ=255)
                                                 aTGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACa                                                                                                 <  7:281662/148‑1 (MQ=255)
                                                  tGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAgg                                                                                               <  5:358565/149‑1 (MQ=255)
                                                            gCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGa                                                                                      <  1:169702/148‑1 (MQ=255)
                                                              cGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACgg                                                                                   >  5:30927/1‑149 (MQ=255)
                                                                     cttcttGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCt                                                                            >  7:171227/1‑149 (MQ=255)
                                                                        cttGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTgg                                                                          <  6:18732/148‑1 (MQ=255)
                                                                           gTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGtt                                                                        <  8:171227/147‑1 (MQ=255)
                                                                              ccGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAg                                                                    >  4:34027/1‑148 (MQ=255)
                                                                               cGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTc                                                                                         <  3:39198/126‑1 (MQ=255)
                                                                               cGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTc                                                                                         >  4:39198/1‑126 (MQ=255)
                                                                               cGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTc                                                                  >  2:218116/1‑149 (MQ=255)
                                                                                              gCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGa                                                   <  3:34027/149‑1 (MQ=255)
                                                                                                aTCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCGGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGAcc                                                 >  4:82406/1‑149 (MQ=255)
                                                                                                aTCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCGAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGAcc                                                 >  4:235110/1‑149 (MQ=255)
                                                                                                aTCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGAcc                                                 >  6:360791/1‑149 (MQ=255)
                                                                                                aTCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGAcc                                                 >  3:235349/1‑149 (MQ=255)
                                                                                                   gCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGAt                                              <  5:9813/149‑1 (MQ=255)
                                                                                                     ccTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGTTCAGGCGCCAGATACCAAGCGACATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGCTTGAAGTCGTAAAACGCGTTCGACCGAt                                              >  2:132224/1‑147 (MQ=255)
                                                                                                     ccTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGAt                                              >  3:170506/1‑147 (MQ=255)
                                                                                                         gTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCACCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAg                                           <  7:48568/146‑1 (MQ=255)
                                                                                                         gTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCACCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAg                                           <  7:266963/146‑1 (MQ=255)
                                                                                                         gTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCACCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAg                                           >  8:266963/1‑146 (MQ=255)
                                                                                                         gTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCACCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAg                                           >  8:48568/1‑146 (MQ=255)
                                                                                                               gaaCTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGa                                  >  3:297954/1‑149 (MQ=255)
                                                                                                                 aCTTGGTGCCGGTCTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATc                                <  3:331566/149‑1 (MQ=255)
                                                                                                                       tGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGc                          <  1:218116/149‑1 (MQ=255)
                                                                                                                         ccGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGcc                         <  6:30927/148‑1 (MQ=255)
                                                                                                                            gtgtGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCGTa                     <  5:360791/149‑1 (MQ=255)
                                                                                                                            gtgtGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAACGCGGTCGACCGATCAGGGCGa                                      <  6:290214/131‑1 (MQ=255)
                                                                                                                            gtgtGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAACGCGGTCGACCGATCAGGGCGa                                      >  5:290214/1‑131 (MQ=255)
                                                                                                                             tgtgCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAACGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCg                       >  1:83569/1‑146 (MQ=255)
                                                                                                                                  aCCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATc                                             >  6:125440/1‑119 (MQ=255)
                                                                                                                                  aCCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATc                                             <  5:125440/119‑1 (MQ=255)
                                                                                                                                    ccAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCg                       <  1:167755/139‑1 (MQ=255)
                                                                                                                                    ccAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCg                       >  2:167755/1‑139 (MQ=255)
                                                                                                                                    ccAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCGTAGACCGGgt             >  8:130247/1‑149 (MQ=255)
                                                                                                                                    ccAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCGTAGACCGGgt             >  1:145008/1‑149 (MQ=255)
                                                                                                                                        tCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCGTAGACCGGgttgtt         <  7:130247/149‑1 (MQ=255)
                                                                                                                                             aCGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGc                                        <  4:206539/113‑1 (MQ=255)
                                                                                                                                             aCGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGc                                        >  3:206539/1‑113 (MQ=255)
                                                                                                                                             aCGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCgg                              <  6:42418/123‑1 (MQ=255)
                                                                                                                                             aCGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCgg                              >  5:42418/1‑123 (MQ=255)
                                                                                                                                             aCGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCGTAGACCGGGTTGTTGACGt    >  4:164287/1‑149 (MQ=255)
                                                                                                                                               gACCGCCCAGGGTCAGGCGCTAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCGTAGACCGGGTTGTTGACGTTg  <  3:235110/149‑1 (MQ=255)
                                                                                                                                               gACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCGTAGACCGGGTTGTTGACGTTg  >  8:97973/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                
CTCGGCATAGGACAGGTACGGCACGAAGCCCGAGTCGAACACGTAGCTGATGGCTGCGTTGCCGCTGAACTTCTTGTCCCGCTGGGTATTGGTGGCATCGCCCTGGTTGAAGAACTTGGTGCCGGTGTGCACCCAGTCTTCACGACCGCCCAGGGTCAGGCGCCAGTTACCAAGCGCCATCTGGTCCTGCACATACAGGCCGGTCTGACGGGTTTTCTGGTTGTAGTCGTAAAACGCGGTCGACCGATCAGGGCGAGTGATCGGCAGCCCGTAGACCGGGTTGTTGACGTTG  >  NC_002947/426029‑426320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: