| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,430,086 | A→C | 8.3% | intergenic (+39/‑145) | PP_3924 → / → PP_3925 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,430,086 | 0 | A | C | 8.3% | 213.1 / 10.0 | 72 | intergenic (+39/‑145) | PP_3924/PP_3925 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (32/34); new base C (2/4); total (34/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.95e-01 | |||||||||||
CGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGACGCATGA > NC_002947/4429948‑4430234 | cggcgAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGt > 8:18167/1‑149 (MQ=255)cggcgAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCGTCAGGCTTCGGt < 7:31711/149‑1 (MQ=255) ggcgAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCGTCAGGCTTCGGtt < 1:68886/149‑1 (MQ=255) gAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGttttt > 4:338811/1‑149 (MQ=255) gAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCGTCAGGCTTCGGt > 1:13898/1‑145 (MQ=255) gAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCGTCAGGCTTCGGt < 2:13898/145‑1 (MQ=255) aCCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGtttttttt > 8:53687/1‑149 (MQ=255) aCCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGtttttttt < 4:199593/149‑1 (MQ=255) aCCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGtttttttt > 2:331312/1‑149 (MQ=255) ccGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTg > 6:198712/1‑149 (MQ=255) cGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGc > 6:230793/1‑149 (MQ=255) gACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGcc < 7:18167/149‑1 (MQ=255) gCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGc < 5:198712/149‑1 (MQ=255) ggCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGt < 3:338811/149‑1 (MQ=255) gCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTg > 8:224957/1‑149 (MQ=255) gCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTg > 2:222228/1‑149 (MQ=255) gCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTg < 7:224957/149‑1 (MQ=255) gCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTg > 6:335612/1‑149 (MQ=255) aTGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGa > 5:165633/1‑149 (MQ=255) tGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGTTCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGa < 1:225621/148‑1 (MQ=255) tGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGAt < 3:22557/149‑1 (MQ=255) tGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCATGCATTCGGTGCAGTGATccac < 7:53687/149‑1 (MQ=255) gCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATccacc < 1:222228/148‑1 (MQ=255) aGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGc > 5:81066/1‑148 (MQ=255) cGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAacac < 1:331312/148‑1 (MQ=255) gTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTc < 6:165633/149‑1 (MQ=255) gAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCAcc > 5:17715/1‑149 (MQ=255) aGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGtt > 6:315900/1‑99 (MQ=255) aGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGtt < 5:315900/99‑1 (MQ=255) gACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTg > 6:196569/1‑149 (MQ=255) gatgCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGcaca > 7:212830/1‑149 (MQ=255) gATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCTCCAGCAACACCCTCACCTATTTGGCACATGGGACGAt > 5:276052/1‑149 (MQ=255) gATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGa < 5:335612/148‑1 (MQ=255) gAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCAc > 5:80471/1‑125 (MQ=255) gAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCAc < 6:80471/125‑1 (MQ=255) aaaCTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGtt > 7:289656/1‑149 (MQ=255) aaCTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCTCCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTc < 6:276052/149‑1 (MQ=255) aaCTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTc < 8:212830/149‑1 (MQ=255) aCTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTcc < 8:289656/149‑1 (MQ=255) tCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCaa < 5:230793/149‑1 (MQ=255) cGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTAGGTTCAGTGATACAACAGCAACACCCTCACCTATTTGGCCCATGGGACGATTGTTCCAACCCt > 3:102170/1‑149 (MQ=255) gAGCTGTACCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTATGCACTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGCTACCATTGTTCCAACCCTg > 6:80987/1‑149 (MQ=255) gTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGa > 1:152777/1‑149 (MQ=255) ccGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCAt < 6:17715/149‑1 (MQ=255) cGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCAtt < 6:81066/149‑1 (MQ=255) cTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGAt < 5:196569/149‑1 (MQ=255) aGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTAc < 2:152777/149‑1 (MQ=255) cTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGt < 8:227716/118‑1 (MQ=255) cTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCaa > 8:257335/1‑149 (MQ=255) cTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCAACAGCAACACCCTCACCTATTTGGCACATGGGACGATTGt > 7:227716/1‑118 (MQ=255) tGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGc > 1:253291/1‑129 (MQ=255) tGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGc < 2:253291/129‑1 (MQ=255) tGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCaa > 2:20270/1‑148 (MQ=255) gAATACCGGATGATCGAAAAACCGAAGCGTGAGGGCTTGGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAg < 4:102170/148‑1 (MQ=255) tACCGGATGATCTAAATACCGAAGCCTGACGGCTTCTGTTTTTTTTGGCCTGCATTCGGTTCAGTGATCCACCAGCAAGACGCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGGGGACCATTAGATTACCCAATAGTAc < 5:80987/148‑1 (MQ=255) ccGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTg > 2:315190/1‑149 (MQ=255) cGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCGCATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAg > 8:92903/1‑142 (MQ=255) cGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCGCATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAg < 7:92903/142‑1 (MQ=255) cGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCGACCCTGGCGGACCATTAGATTACCCAATAGTAc > 2:29412/1‑145 (MQ=255) cGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCGACCCTGGCGGACCATTAGATTACCCAATAGTAc < 1:29412/145‑1 (MQ=255) caaaaaaaaCCGAAGCCGTCAGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCa > 2:316724/5‑120 (MQ=38) caaaaaaaaCCGAAGCCGTCAGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCa < 1:316724/116‑1 (MQ=38) atCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCga < 1:20270/149‑1 (MQ=255) atCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACATATTTTGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATACTACTTTCAATc > 4:75635/1‑147 (MQ=255) tCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTa > 1:122542/1‑122 (MQ=255) tCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTa < 2:122542/122‑1 (MQ=255) cGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTa < 2:269222/121‑1 (MQ=255) cGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTa > 1:269222/1‑121 (MQ=255) cGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGaa < 1:315190/149‑1 (MQ=255) cTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGACGCa < 7:257335/149‑1 (MQ=255) tGACGGCTTCGG‑TTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTg < 6:107871/94‑1 (MQ=255) tGACGGCTTCGG‑TTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTg > 5:107871/1‑94 (MQ=255) aCGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGACGCATGa < 4:81099/149‑1 (MQ=255) | CGGCGAAACCGACGGCATGCAGGCCTTCATGGGTGGCAAGCTGCGGGTTGAAGGCGACATGATGCTGTCGATGAAACTCAGCGAGCTGTTCCCGTCCTGAGGGCTGGGAATACCGGATGATCGAAAAACCGAAGCCTGACGGCTTCGGTTTTTTTTGCCCTGCATTCGGTGCAGTGATCCACCAGCAACACCCTCACCTATTTGGCACATGGGACGATTGTTCCAACCCTGGCGGACCATTAGATTACCCAATAGTACTTGCTATCGAGAATAAGGAAGACGCATGA > NC_002947/4429948‑4430234 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |