| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,541,840 | A→T | 6.2% | Q186L (CAA→CTA) ‡ | nhaB → | Na(+)/H(+) antiporter NhaB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,541,840 | 0 | A | T | 6.2% | 247.7 / 4.8 | 81 | Q186L (CAA→CTA) ‡ | nhaB | Na(+)/H(+) antiporter NhaB |
| Reads supporting (aligned to +/- strand): ref base A (37/39); new base T (2/3); total (39/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.22e-01 | |||||||||||
CTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCGGCCACGAGATGGGG > NC_002947/4541695‑4541988 | cTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAg < 8:181538/148‑1 (MQ=255)cTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAg < 3:132152/148‑1 (MQ=255) tCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCg < 2:149906/148‑1 (MQ=255) cTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACTTGCTGGTCGCTCTccagt < 1:268427/148‑4 (MQ=255) aTCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCAcc > 7:21536/1‑149 (MQ=255) gcgTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCggg > 5:227218/1‑148 (MQ=255) gTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCggg > 8:21022/1‑146 (MQ=255) tcGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGTGAGCGACTTGCTGGTCGCTCTcca < 6:239863/133‑2 (MQ=255) tcGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGTGAGCGACTTGCTGGTCGCTCTcca > 5:239863/1‑132 (MQ=255) gATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTc < 3:59046/147‑1 (MQ=255) aTGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGAc < 8:160410/149‑1 (MQ=255) aTGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGAc < 8:21536/149‑1 (MQ=255) aTGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGAc > 2:290776/1‑149 (MQ=255) cccTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCgg < 2:178407/134‑1 (MQ=255) cccTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCgg > 1:178407/1‑134 (MQ=255) ccTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGt > 6:89808/1‑149 (MQ=255) ccTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGt > 1:149506/1‑149 (MQ=255) cTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGtt > 8:17495/1‑149 (MQ=255) aCCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGAAAGCGCACTGGAGAGCGCCCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCcg > 8:246730/1‑149 (MQ=255) gcggTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGGTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCt < 8:102179/149‑1 (MQ=255) cggTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTg > 6:9041/1‑149 (MQ=255) ggTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGc > 1:240524/1‑149 (MQ=255) tcatcaGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGc < 7:17495/149‑1 (MQ=255) tcatcaGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGc < 1:276157/149‑1 (MQ=255) atcaGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCct > 3:15047/1‑149 (MQ=255) tcaGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTc < 7:185971/128‑1 (MQ=255) tcaGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTc > 8:185971/1‑128 (MQ=255) tcaGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGc < 1:134564/146‑1 (MQ=255) tcaGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGc > 2:134564/1‑146 (MQ=255) tcaGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCctg > 6:310380/1‑149 (MQ=255) tcaGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCctg > 6:290771/1‑149 (MQ=255) aGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCctgct < 4:15047/149‑1 (MQ=255) aGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCctgc < 6:227218/148‑1 (MQ=255) gcgcTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTcc > 4:135089/1‑135 (MQ=255) gcgcTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTcc < 3:135089/135‑1 (MQ=255) ggTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATg < 1:130649/149‑1 (MQ=255) gTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATgg < 2:240524/149‑1 (MQ=255) gTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATgg > 5:83395/1‑149 (MQ=255) tCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGgc > 1:49221/1‑149 (MQ=255) ggCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGgcgc > 8:3619/1‑149 (MQ=255) ggCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGgcgc < 2:149506/149‑1 (MQ=255) cTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCt < 2:279656/123‑1 (MQ=255) cTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCt > 1:279656/1‑123 (MQ=255) ttCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtgt > 2:262221/1‑149 (MQ=255) cTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtgtg < 5:9041/148‑1 (MQ=255) gtgtACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGc > 4:136039/1‑149 (MQ=255) ccaccGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTgg > 7:226950/1‑149 (MQ=255) caccGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTggg > 3:299821/1‑149 (MQ=255) caccGCATCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtgt < 8:77667/134‑1 (MQ=255) caccGCATCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtgt > 7:77667/1‑134 (MQ=255) accGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCtcct < 5:251547/105‑4 (MQ=255) accGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCtcct > 6:251547/1‑102 (MQ=255) accGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCctgc < 8:95069/117‑1 (MQ=255) ccGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGggcg < 2:49221/149‑1 (MQ=255) gcgtcgcgtcCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTgg < 6:12240/132‑1 (MQ=255) gcgtcgcgtcCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTgg > 5:12240/1‑132 (MQ=255) gcgtcgcgtcCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGggcggc < 1:290776/149‑1 (MQ=255) gcgtcCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTg < 6:83395/149‑1 (MQ=255) cGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGt < 7:21022/149‑1 (MQ=255) ggggCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGtt < 8:226950/149‑1 (MQ=255) ccAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTtggtg < 5:310380/149‑1 (MQ=255) ccAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTtggtg < 7:35388/149‑1 (MQ=255) tCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTtggtgg < 6:270950/146‑1 (MQ=255) tCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTtggtgg > 5:270950/1‑146 (MQ=255) tCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGc > 6:337687/1‑148 (MQ=255) gAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCa < 1:262221/149‑1 (MQ=255) aGCGCGCTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGggc < 4:206725/114‑1 (MQ=255) aGCGCGCTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGggc > 3:206725/1‑114 (MQ=255) gcgcACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACctg > 4:61556/1‑149 (MQ=255) cgcACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACctgc < 5:89808/149‑1 (MQ=255) gcACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACctgc > 7:186984/1‑148 (MQ=255) gcACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACctgc < 8:186984/148‑1 (MQ=255) tGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCGTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCGTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATc > 6:129093/1‑149 (MQ=255) gtgagCGACTTGCTGGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGggcggc > 6:150514/3‑108 (MQ=255) gtgagCGACTTGCTGGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGggcggc < 5:150514/106‑1 (MQ=255) gagaGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCg < 5:337687/148‑1 (MQ=255) gagCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCGGc > 2:1558/1‑148 (MQ=255) gACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCGGCCACga < 5:290771/149‑1 (MQ=255) cAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCGGCCACGAGAt > 2:276672/1‑149 (MQ=255) gCAAGTCGCTCACCTGCACCTGGAAGACCTCGACCAGTTACGCGCCTTCATGCGTAGCCTGCTGATGCATGGCGCTTTGGGTACCGCCCTGGGCGGCCTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCGGCCa > 7:140705/1‑141 (MQ=255) gCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCTCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCGGCCa < 8:140705/141‑1 (MQ=255) aaGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCGGCCACGAGATgggg > 4:1082/1‑149 (MQ=255) aaGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCGGCCACGAGATgggg < 7:3619/149‑1 (MQ=255) | CTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCCTGGGCGGCGTTTGCACGTTGGTGGGCGAGCCGCAGAACCTGCTGATCGGCCACGAGATGGGG > NC_002947/4541695‑4541988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |