Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,635,568 A→C 100% L63R (CTG→CGG)  uvrY ← BarA/UvrY two‑componenent system response regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,635,5680AC100.0% 225.0 / NA 67L63R (CTG→CGG) uvrYBarA/UvrY two‑componenent system response regulator
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (35/32);  total (35/32)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

ATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCAGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCGTGT  >  NC_002947/4635424‑4635704
                                                                                                                                                |                                                                                                                                        
aTTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGgcc                                                                                                                                      <  1:332769/149‑1 (MQ=255)
      tCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGgccgcc                                                                                                                                   >  5:113789/1‑146 (MQ=255)
      tCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGgccgc                                                                                                                                    <  8:288895/145‑1 (MQ=255)
      tCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGgccgc                                                                                                                                    >  7:288895/1‑145 (MQ=255)
      tCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGAt                                                                                                                                >  1:224830/1‑149 (MQ=255)
      tCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGAt                                                                                                                                >  3:265930/1‑149 (MQ=255)
      tCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGAt                                                                                                                                >  5:312495/1‑149 (MQ=255)
      tCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTCGCCTCCCGgccgcc                                                                                                                                   <  6:113789/146‑1 (MQ=255)
        aaGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGc                                                                                                                              <  4:265930/149‑1 (MQ=255)
             cTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCggg                                                                                                                          >  1:70506/1‑148 (MQ=255)
                cACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCa                                                                                                                        <  7:13843/147‑1 (MQ=255)
                   ccTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCAtttt                                                                                                                    >  7:27525/1‑148 (MQ=255)
                       ggTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTcaca                                                                                                                <  5:244538/148‑1 (MQ=255)
                           aGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCAcatccat                                                                                                           <  6:312495/149‑1 (MQ=255)
                           aGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCAcatccat                                                                                                           <  2:224830/149‑1 (MQ=255)
                            ggTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCAcatccat                                                                                                           >  4:95186/1‑148 (MQ=255)
                                   ggCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACaa                                                                                                   >  4:156962/1‑149 (MQ=255)
                                        cgcCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTcc                                                                                              >  5:328940/1‑149 (MQ=255)
                                         gcCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCg                                                                                             >  5:275326/1‑149 (MQ=255)
                                              ccTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTc                                                                                        <  6:328940/149‑1 (MQ=255)
                                              ccTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTc                                                                                        <  2:108848/149‑1 (MQ=255)
                                               cTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGAGGGTGGCCTCCCGGCCGACGATGCCGGGCATTTTCACATCCATAAGAACAACGTCAGGttt                                                                                         >  6:67133/1‑147 (MQ=255)
                                                tGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAg                                                                                      >  1:299305/1‑149 (MQ=255)
                                                      aaGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCg                                                                                >  7:256902/1‑149 (MQ=255)
                                                       aGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTTGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCgg                                                                               <  3:95186/149‑1 (MQ=255)
                                                       aGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCgg                                                                               <  3:156962/149‑1 (MQ=255)
                                                        gCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGAt                                                                                                                                >  6:342923/1‑99 (MQ=255)
                                                        gCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGAt                                                                                                                                <  5:342923/99‑1 (MQ=255)
                                                           tgtgGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCa                                                                           <  8:27525/149‑1 (MQ=255)
                                                            gtgGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGt                                                                                           <  1:124031/132‑1 (MQ=255)
                                                            gtgGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGt                                                                                           >  2:124031/1‑132 (MQ=255)
                                                              ggggAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGcc                                                                            <  1:277860/145‑1 (MQ=255)
                                                              ggggAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGcc                                                                            >  2:277860/1‑145 (MQ=255)
                                                              ggggAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGtt                                                                        >  7:244188/1‑149 (MQ=255)
                                                                 gAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCa                                                                     <  2:224314/149‑1 (MQ=255)
                                                                   aCGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGt                                                                   <  6:275326/149‑1 (MQ=255)
                                                                   aCGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGt                                                                   <  2:70506/149‑1 (MQ=255)
                                                                      ggTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAAc                                                                                                  >  6:72251/1‑115 (MQ=255)
                                                                      ggTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAAc                                                                                                  <  5:72251/115‑1 (MQ=255)
                                                                        tCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCgg                                                                                                                           <  7:160843/88‑1 (MQ=255)
                                                                        tCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCgg                                                                                                                           >  8:160843/1‑88 (MQ=255)
                                                                          ttCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACt                                                            >  8:243270/1‑149 (MQ=255)
                                                                             cTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGc                                                         <  8:256902/149‑1 (MQ=255)
                                                                                gCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTc                                                                                               >  3:208298/1‑108 (MQ=255)
                                                                                gCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTc                                                                                               <  4:208298/108‑1 (MQ=255)
                                                                                     ccGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAAtct                                                 >  2:281831/1‑149 (MQ=255)
                                                                                                  tACCTTGATGTCAGTGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACccacca                                    >  8:4391/1‑149 (MQ=255)
                                                                                                     cTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCt                                 >  6:323831/1‑149 (MQ=255)
                                                                                                      ttGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCg                                                       >  1:172041/1‑126 (MQ=255)
                                                                                                      ttGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCg                                                       <  2:172041/126‑1 (MQ=255)
                                                                                                      ttGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTg                                >  2:276538/1‑149 (MQ=255)
                                                                                                         aTGTCAGGGTTGCTGCTCATCATTTTGCGGGTGGCCTACCGGCAGCCGATGCCGGGCATTTTAACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCa                              <  5:67133/148‑1 (MQ=255)
                                                                                                              aGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGt                        >  6:111507/1‑149 (MQ=255)
                                                                                                               gtgTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTc                       <  7:4391/147‑1 (MQ=255)
                                                                                                                      tGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCg                >  3:329082/1‑149 (MQ=255)
                                                                                                                      tGCGCAGCAGTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCg                >  2:226966/1‑149 (MQ=255)
                                                                                                                           agcagTTTGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCaa           >  5:189584/1‑149 (MQ=255)
                                                                                                                                tttGCGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCTGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATcc      <  1:281831/149‑1 (MQ=255)
                                                                                                                                    cGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCgtg   <  1:226966/148‑1 (MQ=255)
                                                                                                                                    cGGGTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTAACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCgtgt  <  8:244188/149‑1 (MQ=255)
                                                                                                                                     gggTGGCCTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCgtgt  >  1:50930/1‑148 (MQ=255)
                                                                                                                                            cTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAg                             >  5:348014/1‑114 (MQ=255)
                                                                                                                                            cTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAg                             >  5:47041/1‑114 (MQ=255)
                                                                                                                                            cTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAg                             <  6:47041/114‑1 (MQ=255)
                                                                                                                                            cTCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAg                             <  6:348014/114‑1 (MQ=255)
                                                                                                                                             tCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGcc             <  4:25105/129‑1 (MQ=255)
                                                                                                                                             tCCCGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGcc             >  3:25105/1‑129 (MQ=255)
                                                                                                                                                |                                                                                                                                        
ATTTCGTCAAGGCCTGCACCCTTGGTCAGGTAGCCGGCAGCGCCGGCCTGCAACAAGCGTGTGGGGAACGGGTCTTCCTCGCACACCGTCACCGCCACTACCTTGATGTCAGGGTGGCTGCGCAGCAGTTTGCGGGTGGCCTCCAGGCCGCCGATGCCGGGCATTTTCACATCCATCAGCACAACGTCCGGTTTCAGCTCCCGGGCCAGTTTCAGTGCCGACTCGCCGGAATCTCCCTCACCCACCACCTGCAGGCCGTCGATGTCGGCCAACATCCGTGT  >  NC_002947/4635424‑4635704

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑