| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,758,424 | C→G | 8.1% | V454L (GTG→CTG) | pvdP ← | pyoverdine biosynthesis‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,758,424 | 0 | C | G | 8.1% | 273.3 / 10.0 | 86 | V454L (GTG→CTG) | pvdP | pyoverdine biosynthesis‑like protein |
| Reads supporting (aligned to +/- strand): ref base C (37/42); new base G (3/4); total (40/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01 | |||||||||||
CATCTCCACGCTACGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTCCCCGAGAAAGTCGTTCTGCGCGCCATAC > NC_002947/4758290‑4758563 | cATCTCCACGGTACGCCCTGGGCGCAGCCCCGCCACGTTACTGCTGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACGTCCAGCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGt < 3:200921/149‑1 (MQ=255)cATCTCCACGCTACGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCAGTCGTGCGCCAggag < 6:196380/149‑3 (MQ=255)cATCTCCACGCTACGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGt < 8:145355/149‑1 (MQ=255) aTCTCCACGCTACGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTg > 4:105542/1‑149 (MQ=255) cACGCTACGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATc > 2:125457/1‑149 (MQ=255) cGCTACGCCCTGGTCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCCTGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGt < 1:258537/149‑1 (MQ=255) gCTACGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGtt > 3:249910/1‑149 (MQ=255) gCTACGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGtt > 2:94717/1‑149 (MQ=255) cTACGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTc < 6:325907/149‑1 (MQ=255) aCGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCAt > 8:279354/1‑149 (MQ=255) cGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCAt < 3:234161/148‑1 (MQ=255) cGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCAt < 3:105542/148‑1 (MQ=255) gCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATgg > 3:342746/1‑149 (MQ=255) gCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATgg > 3:122011/1‑149 (MQ=255) ccTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCTCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGgc > 3:197789/1‑149 (MQ=255) ccTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCAGTCGTGCGCCAgga > 4:227290/1‑131 (MQ=255) ccTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCAGTCGTGCGCCAgga < 3:227290/132‑2 (MQ=255) ccTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGgc > 6:337643/1‑149 (MQ=255) cTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGgcg > 6:204588/1‑149 (MQ=255) tGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGgcgc > 7:252070/1‑149 (MQ=255) ggCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGgcgc < 7:3933/147‑1 (MQ=255) gcAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAAc < 4:249910/149‑1 (MQ=255) cAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAAcc < 8:252070/149‑1 (MQ=255) aGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCa < 1:279934/149‑1 (MQ=255) cccGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTc < 5:204588/149‑1 (MQ=255) ccGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTcc > 1:102711/1‑149 (MQ=255) ccACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTc > 7:61991/1‑148 (MQ=255) cACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGa < 2:102711/149‑1 (MQ=255) gTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCCGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGa > 2:33197/1‑101 (MQ=255) gTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCActa < 1:33197/101‑3 (MQ=255) gTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGaca > 2:338150/1‑148 (MQ=255) gTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGaca < 1:338150/148‑1 (MQ=255) tGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGgtcg > 1:344356/1‑149 (MQ=255) cAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGgtcgt < 1:125457/148‑1 (MQ=255) gtgcgtgTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATcc > 2:19880/1‑149 (MQ=255) gtgcgtgTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATc > 1:211261/1‑148 (MQ=255) tCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCAt < 1:94717/148‑1 (MQ=255) tCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCAt < 7:279354/148‑1 (MQ=255) ccGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGCACCAGTCCTCGCCACGGTCGTCGATCCAGCCATg > 4:27692/1‑148 (MQ=255) ctccAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAgc < 4:197789/147‑1 (MQ=255) ccAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAgcgc < 8:61991/149‑1 (MQ=255) ccAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAgcgc > 3:224675/1‑149 (MQ=255) cacgcAAGGATCGGCGACCTCCACCCTGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATggg < 4:262179/97‑1 (MQ=255) gCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAg < 5:337643/149‑1 (MQ=255) ccAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCa < 7:126568/94‑1 (MQ=255) ccAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCa > 8:126568/1‑94 (MQ=255) ggCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAAcaca > 8:144809/1‑145 (MQ=255) ggCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAAcaca < 7:144809/145‑1 (MQ=255) cTCCACCCAGTGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGt > 2:103884/1‑149 (MQ=255) tCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGCACCAGTCCTCGACACGGGCGTCGATCCCGCCATGGCAGCGCCAGAacac > 8:185858/1‑137 (MQ=255) tCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAacac < 7:185858/137‑1 (MQ=255) tCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTg > 1:162098/1‑149 (MQ=255) cACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTg < 4:122011/147‑1 (MQ=255) aCCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTggg > 3:227067/1‑148 (MQ=255) cccAGCGCCCCGGCGCGATCCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGaa < 5:257745/149‑1 (MQ=255) cccAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTggg > 2:263520/1‑147 (MQ=255) ccAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCCCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGt < 3:118842/143‑1 (MQ=255) ccAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCCCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGt > 4:118842/1‑143 (MQ=255) cAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATgg < 6:33911/117‑1 (MQ=255) cAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAaga < 2:344356/149‑1 (MQ=255) cAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGCTTGCCGAGGGaa > 8:160453/1‑147 (MQ=255) cgcCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGaa < 4:342746/149‑1 (MQ=255) gcCCCGGCGCTAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAAc < 7:160453/149‑1 (MQ=255) ccGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACggg < 4:224675/149‑1 (MQ=255) cGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTg < 6:289058/135‑1 (MQ=255) cGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTg > 5:289058/1‑135 (MQ=255) ggtcaaTGGCGTGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTcccc > 5:320342/6‑147 (MQ=255) cATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAaga > 4:326110/1‑131 (MQ=255) cATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAaga < 3:326110/131‑1 (MQ=255) cATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTCCCCGAGaaa < 1:19880/149‑1 (MQ=255) gCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTCCCCGAGAAAGTCg < 4:227067/149‑1 (MQ=255) aCGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTCCCCGAGAAAGTCGtt < 1:263520/149‑1 (MQ=255) cATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAgcg < 1:175677/94‑1 (MQ=255) cATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAgcg > 2:175677/1‑94 (MQ=255) aTTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTCCCCGAGAAAGTc < 7:62406/141‑1 (MQ=255) aTTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTCCCCGAGAAAGTc > 8:62406/1‑141 (MQ=255) aTTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTCCCCGAGAAAGTCGTTCTgcg > 4:98939/1‑149 (MQ=255) aCCTCCTGGCTCACGACTGCGCCAGGTTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCATAACACAGTGTTGACGTTGGAAGAGAACGGGTCCCCGAGAAAGTCGTTCTGCGCGcc < 5:71676/149‑1 (MQ=255) aCCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTCCCCGAGAAAGTCGTTCTgc < 2:333085/144‑1 (MQ=255) aCCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTCCCCGAGAAAGTCGTTCTgc > 1:333085/1‑144 (MQ=255) ctcctGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTCCCCGAGAAAGTCGTTCTGCGCGCCAt < 2:123585/149‑1 (MQ=255) cctGGCGCAGTCGTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTcc > 4:268540/1‑122 (MQ=255) cctGGCGCAGTCGTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTcc < 3:268540/122‑1 (MQ=255) cctGGCGCAGTCGTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTCCCCGAGAAAGTCGTTCTGCGCGCCATAc > 2:111355/1‑149 (MQ=255) cctGGCGCAGTCGTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTCCCCGAGAAAGTCGTTCTGCGCGCCATAc < 1:111355/149‑1 (MQ=255) cctGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTCCCCGAGAAAGTCGTTCTGCGCGCCAt > 2:71624/1‑147 (MQ=255) cctGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTCCCCGAGAAAGTCGTTCTGCGCGCCAt < 1:71624/147‑1 (MQ=255) | CATCTCCACGCTACGCCCTGGGCGCAGCCCCGCCACGTTACTGCAGCCGTGCGTGTCCGGCCCCAGCCAAGGATCGGCGACCTCCACCCAGCGCCCCGGCGCGAACCATGGCACGCCATTGACCTCCTGGCGCACGACTGCGCCAGGGTGGAATCGTTCATGGGCGCGGAACCAGTCCTCGACACGGTCGTCGATCCAGCCATGGAAGCGCCAGAACACAGGGTTGACGTGGGAAGAGAACGGGTCCCCGAGAAAGTCGTTCTGCGCGCCATAC > NC_002947/4758290‑4758563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |