| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,792,250 | A→G | 5.5% | S530S (AGT→AGC) | pvdI ← | non‑ribosomal peptide synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,792,250 | 0 | A | G | 5.5% | 214.9 / 2.3 | 73 | S530S (AGT→AGC) | pvdI | non‑ribosomal peptide synthetase |
| Reads supporting (aligned to +/- strand): ref base A (34/35); new base G (2/2); total (36/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.25e-01 | |||||||||||
CGCCCCCCCGGCCTTGAGAATCGCCAGCAGGCCAACCAACAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCTGCGGTGCGGCAACAGGTGCGCCCGCCAGCGGCCAGTCACCCAGC > NC_002947/4792103‑4792397 | cGCCCCCCCGGCCTTGAGAATCGCCAGCAGGCCAACCAACAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAAc > 3:24068/1‑149 (MQ=255)cGCCCCCCCGGCCTTGAGAATCGCCAGCAGGCCAACCAACAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAAc < 2:87684/149‑1 (MQ=255) ccccccGGCCTTGAGAATCGCCAGCAGGCCAACCAACAGGTTCACCGAGGCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACt > 1:257693/1‑148 (MQ=255) ccGGCCTTGAGAATCGCCAGCAGGCCAACCAACAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTgagcga < 4:24068/149‑1 (MQ=255) ccGGCCTTGAGAAGCGCCAGCAGGCCACCCAACAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTgagcga < 7:141074/149‑1 (MQ=255) cGGCCTTGAGAATCGCCAGCAGGCCAACCAACAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTgagcgag < 5:236792/149‑1 (MQ=255) cTTGAGAATCGCCAGCAGGCCAACCAACAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCAt > 6:335428/1‑149 (MQ=255) aaTCGCCAGCAGGCCAACCAACAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCa > 8:289956/1‑148 (MQ=255) aaTCGCCAGCAGGCCAACCAACAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCAc < 2:257693/149‑1 (MQ=255) tCGCCAGCAGGCCAACCAACAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCACGCCGTAACTGAGCGAGCCATCGGCACTg > 3:201666/1‑149 (MQ=255) gCCAGCAGGCCAACCAACAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGa < 4:201666/148‑1 (MQ=255) ccAGCAGGCCAACCAACAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTgagcgag > 2:75874/1‑134 (MQ=255) ccAGCAGGCCAACCAACAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTgagcgag < 1:75874/134‑1 (MQ=255) cagcagGCCAACCAACAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACaa < 5:335428/149‑1 (MQ=255) cagGCCAACCAACAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACgg < 2:175215/149‑1 (MQ=255) gCCAACCAACAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGa > 8:269479/1‑149 (MQ=255) ccaaccaaCAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGAt > 3:300578/1‑149 (MQ=255) ccaaccaaCAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGAt < 4:300578/149‑1 (MQ=255) caaccaacAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATg > 3:111467/1‑149 (MQ=255) caaccaacAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATg > 6:109328/1‑149 (MQ=255) caaccaacAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATg > 8:264135/1‑149 (MQ=255) aacAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCgctg < 4:23215/149‑1 (MQ=255) gTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCgctgcggct > 2:321038/1‑149 (MQ=255) aCCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGCGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTgcgc > 6:276523/1‑149 (MQ=255) ccGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTAAc > 2:281556/1‑124 (MQ=255) ccGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTAAc < 1:281556/124‑1 (MQ=255) gA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCtt < 7:269479/149‑1 (MQ=255) a‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTg < 5:109328/149‑1 (MQ=255) a‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTg < 7:264135/149‑1 (MQ=255) gcgcTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTgagcga > 7:49702/1‑105 (MQ=255) gcgcTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTgagcga < 8:49702/105‑1 (MQ=255) cTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCaa < 7:289956/149‑1 (MQ=255) tCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCa > 2:284393/1‑147 (MQ=255) ggCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAGCTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAgg > 8:227118/1‑149 (MQ=255) ggCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAGCTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAgg > 8:227119/1‑149 (MQ=255) aGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAGCTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCa < 7:227118/148‑1 (MQ=255) aGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAGATGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGGCa < 7:227119/148‑1 (MQ=255) gCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCAcgc < 4:111467/149‑1 (MQ=255) cACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCtt < 8:19607/129‑1 (MQ=255) cACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCtt > 7:19607/1‑129 (MQ=255) aTCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTgcagc > 5:332693/1‑148 (MQ=255) ggCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGTCAAAGGCCGTCACGCGCTGGTGCAGCAAc < 1:321038/148‑1 (MQ=255) aCCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGcc > 5:114738/1‑149 (MQ=255) cacCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCgg > 8:37306/1‑147 (MQ=255) cacCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCgg < 7:37306/147‑1 (MQ=255) acCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCa > 5:321827/1‑148 (MQ=255) cGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCAt > 8:144040/1‑147 (MQ=255) cGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATaa < 6:332693/149‑1 (MQ=255) cGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGAAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATaa < 1:284393/149‑1 (MQ=255) ttGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTgg > 6:205710/1‑101 (MQ=255) ttGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTgg < 5:205710/101‑1 (MQ=255) aGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCtt > 7:328963/1‑95 (MQ=255) aGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCtt < 8:328963/95‑1 (MQ=255) cTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCTTAACTGAGCGAGCGATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTTGGAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGTCATAATGCAGCACCtgcg < 6:361886/149‑1 (MQ=255) tGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGgca < 1:277668/139‑1 (MQ=255) tGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGgca > 2:277668/1‑139 (MQ=255) cacacaGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCtgcggtgcg < 6:114738/149‑1 (MQ=255) acacaGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCtgcggtgcgg > 4:196980/1‑149 (MQ=255) cacaGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCTGCGGTGCGGc < 7:144040/149‑1 (MQ=255) acaGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCTGCGGTGCGGc > 2:240257/1‑148 (MQ=255) caGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCtgcggtgc < 5:299240/144‑1 (MQ=255) caGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCtgcggtgc > 6:299240/1‑144 (MQ=255) gCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCTGCGGTGCGGCaa > 7:198316/1‑147 (MQ=255) gCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCTGCGGTGCGGCaa > 5:159524/1‑147 (MQ=255) gATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACgg < 1:232948/112‑1 (MQ=255) gATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACgg > 2:232948/1‑112 (MQ=255) aTCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCTGCGGTGCGGCAACAGGt < 6:321827/148‑1 (MQ=255) tCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCTGCGGTGCGGCAACAGGTgc > 3:347036/1‑149 (MQ=255) gTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCTGCGGTGCGGCAACAGGTGCGCCCGCCAGCg < 4:347036/149‑1 (MQ=255) gCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCTGCGGTGCGGCAACAGGTGCGCCCGCCAGCGGc > 3:236407/1‑146 (MQ=255) gCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCTGCGGTGCGGCAACAGGTGCGCCCGCCAGCGGc < 4:236407/146‑1 (MQ=255) gTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCGCGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCTGCGGTGCGGCAACAGGTGCGCCCGCCAGCGGCCAGTCAcc > 3:4265/1‑147 (MQ=255) gTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTGGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCTGCGGTGCGGCAACAGGTGCGCCCGCCAGCGGCCAGTCACCca < 5:276523/149‑1 (MQ=255) aaCTGAGCGAGCCATCGGCACTGAAAACGGCGATGCGCTGCGGCTGCGCCTAGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCTGCCGTGCGGCAACAGGTGCGCACGCCAGCGGCAAGTCACCcagc > 7:181927/1‑149 (MQ=255) | CGCCCCCCCGGCCTTGAGAATCGCCAGCAGGCCAACCAACAGGTTCACCGA‑GCGCTCGGCGATCAGGCCCACCGGCTGATCGGCGACCACACCGTGCGCTTGCAGCTGGGCACACAGCTGATCGGCGCGCGCGTCGAGCTCGCCGTAACTGAGCGAGCCATCGGCACTGACAACGGCGATGCGCTGCGGCTGCGCCTTGGCAAAGGCCGTCACGCGCTGGTGCAGCAACGGGCCGGCATAAGGCAGCACCTGCGGTGCGGCAACAGGTGCGCCCGCCAGCGGCCAGTCACCCAGC > NC_002947/4792103‑4792397 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |