| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,822,351 | T→C | 5.6% | S2947G (AGC→GGC) | pvdL ← | non‑ribosomal peptide synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,822,351 | 0 | T | C | 5.6% | 204.7 / 2.6 | 71 | S2947G (AGC→GGC) | pvdL | non‑ribosomal peptide synthetase |
| Reads supporting (aligned to +/- strand): ref base T (30/37); new base C (2/2); total (32/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.43e-01 | |||||||||||
TCCACGTCCAGGCCGATGGCCAGGGTTTGAGCGTGGCGATGCAAATTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACACGCCATCAACAACCAGGTGATGAATCGCCAGCAGCAACC > NC_002947/4822203‑4822491 | tCCACGTCCAGGCCGATGGCCAGGGTTTGAGCGTGGCGATGCAAATTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCt > 7:8940/1‑149 (MQ=255) gTCCAGGCCGATGGCCAGGGTTTGAGCGTGGCGATGCAAATTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTTACGCAGCGAATCGCTGCCGGCGTAGCTgg > 5:197887/1‑146 (MQ=255) gTCCAGGCCGATGGCCAGGGTTTGAGCGTGGCGATGCAAATTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTTACGCAGCGAATCGCTGCCGGCGTAGCTgg < 6:197887/146‑1 (MQ=255) ggCCGATGGCCAGGGTTTGAGCGTGGCGATGCAAATTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGgcgc < 8:107602/149‑1 (MQ=255) gCCGATGGCCAGGGTTTGAGCGTGGCGATGCAAATTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGgcgcg > 4:146330/1‑149 (MQ=255) gATGGCCAGGGTTTGAGCGTGGCGATGCAAATTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAg > 7:178442/1‑149 (MQ=255) aTGGCCAGGGTTTGAGCGTGGCGATGCAAATTGCTGCCCTGCGGATGGGCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGc < 3:220907/149‑1 (MQ=255) gCCTGGGTTTGAGCGTGGCGATGCAAATTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCa < 2:225156/149‑1 (MQ=255) cAGGGTTTGAGCGTGGCGATGCAAATTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGt > 6:241251/1‑149 (MQ=255) gTTTGAGCGTGGCGATGCAAATTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGcc > 5:24625/1‑149 (MQ=255) tttGAGCGTGGCGATGCAAATTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCg < 5:261047/149‑1 (MQ=255) aGCGTGGCGATGCAAATTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACg < 3:146330/148‑1 (MQ=255) cGATGGAAATTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGt < 6:55421/149‑1 (MQ=255) aTGCAAATTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCt > 3:202677/1‑149 (MQ=255) cAAATTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTg < 5:241251/148‑1 (MQ=255) aaaTTGCTGCCCTGTGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGc > 2:265222/1‑149 (MQ=255) aaaTTGCTGCCCTGCGGATGTTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGc < 6:24625/149‑1 (MQ=255) aaaTTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGa < 1:148346/133‑1 (MQ=255) aaaTTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGa > 2:148346/1‑133 (MQ=255) aaTTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCt < 4:222156/106‑1 (MQ=255) aaTTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTg > 1:206333/1‑146 (MQ=255) aaTTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTg < 2:206333/146‑1 (MQ=255) tgcCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCa > 4:266365/1‑147 (MQ=255) cccTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCag‑ag < 7:135425/148‑1 (MQ=255) cccTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCag‑a < 4:202677/147‑1 (MQ=255) ccTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGc > 3:150774/1‑149 (MQ=255) ccTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGc < 4:150774/149‑1 (MQ=255) tGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGCGCACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCt > 1:261364/1‑149 (MQ=255) tGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTgg < 6:21289/129‑1 (MQ=255) tGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTgg > 5:21289/1‑129 (MQ=255) tggATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTg < 1:265222/146‑1 (MQ=255) cGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTg < 6:154744/147‑1 (MQ=255) aTGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGTGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCAc > 4:90133/1‑149 (MQ=255) tCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGc > 8:176049/1‑109 (MQ=255) tCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGc < 2:306399/132‑1 (MQ=255) tCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGc > 1:306399/1‑132 (MQ=255) gCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCCGGCCAGGCGCGGAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTa > 1:285129/1‑147 (MQ=255) gCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCCGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTa > 1:281449/1‑147 (MQ=255) aCGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAgc < 2:261364/149‑1 (MQ=255) ggCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAgcgc > 6:321141/1‑149 (MQ=255) cgcgACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAg < 6:357688/148‑1 (MQ=255) gcgACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAGCAGGCTGGCCACGGTACAGCGCCTGCAg < 1:192802/148‑1 (MQ=255) gcgACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGt > 5:307534/1‑149 (MQ=255) cGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTc < 8:8940/149‑1 (MQ=255) cGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTc > 2:341949/1‑149 (MQ=255) cGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTc > 2:347283/1‑149 (MQ=255) acacCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTgg < 1:253977/120‑1 (MQ=255) acacCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTgg > 2:253977/1‑120 (MQ=255) acacCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCcag < 3:266365/149‑1 (MQ=255) cGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCagcagc < 6:307534/149‑1 (MQ=255) gCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAgcagca < 5:321141/149‑1 (MQ=255) ccTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGa > 7:20724/1‑149 (MQ=255) ttGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGaca > 6:341853/1‑149 (MQ=255) caccaGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACACGc > 8:29336/1‑148 (MQ=255) accaGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCcag < 6:158469/127‑1 (MQ=255) ccaGGCCAGTTCGTCACGTAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACCCGACa > 3:267859/1‑148 (MQ=255) caGGCCAGTTCGTCACGCAGTGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACACGCCATc < 3:90133/149‑1 (MQ=255) ttCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACACGCCATCAACAACCa < 8:178442/149‑1 (MQ=255) gTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACACGc < 3:149153/134‑1 (MQ=255) gTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACACGc > 4:149153/1‑134 (MQ=255) gTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACACGCCATCAACAACCAGGt < 7:29336/149‑1 (MQ=255) gTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACACGCCATCAACAACCAGGt < 1:347283/149‑1 (MQ=255) gTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACACGCCATCAACAACCAGGt < 1:341949/149‑1 (MQ=255) cACGTAGCGAATCTGTGGCGGCGTAGCTGGCCATGCGCGGATCCCAGTCCCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACACGACATCAACAACCAGGtg < 4:267859/148‑1 (MQ=255) aCGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACACGCCATCAACAACCAGGtgat < 3:12004/149‑1 (MQ=255) aCGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACACGCCATCAACAACCAGGtga < 5:341853/148‑1 (MQ=255) cGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGc > 5:121030/1‑94 (MQ=255) cGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGc < 6:121030/94‑1 (MQ=255) cGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACACGCCATCAACAACCAGGTGATGAATCg > 5:219739/1‑149 (MQ=255) tCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACACGCCATCAACAACCAGGTGATGAATCGCcag > 4:347049/1‑149 (MQ=255) gCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCa > 8:102876/1‑89 (MQ=255) ggCGTAGCCGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACACGCCATCAACAACCAGGTGATGAATCGCCAGCAGCAAcc < 2:281449/149‑1 (MQ=255) ggCGTAGCCGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACACGCCATCAACAACCAGGTGATGAATCGCCAGCAGCAAcc < 2:285129/149‑1 (MQ=255) | TCCACGTCCAGGCCGATGGCCAGGGTTTGAGCGTGGCGATGCAAATTGCTGCCCTGCGGATGGTCGCACGGCAATTCGCGACGCACACCGCCCAGCTGGCCTTGC‑CACCAGGCCAGTTCGTCACGCAGCGAATCGCTGCCGGCGTAGCTGGCCAGGCGCGCAGCCCAGTCGCCGACGGCGTGGGTCTTGGCCGGCAG‑AGGCTGGCCACGGTACAGCGCCTGCAGGTCTTCCAGCAGCACCCGCCAGGACACGCCATCAACAACCAGGTGATGAATCGCCAGCAGCAACC > NC_002947/4822203‑4822491 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |