| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,873,747 | T→A | 7.9% | intergenic (‑128/+30) | aqpZ ← / ← PP_4283 | aquaporin Z/GntR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,873,747 | 0 | T | A | 7.9% | 183.2 / 5.5 | 63 | intergenic (‑128/+30) | aqpZ/PP_4283 | aquaporin Z/GntR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (25/32); new base A (2/3); total (27/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
ATGCGTTTACCCAGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTCCATGTGATGCA > NC_002947/4873600‑4873895 | aTGCGTTTACCCAGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCtg > 8:5265/1‑148 (MQ=255) ccAGGGCCATGCTCATGAATCCATTCCTCAAGAAGATGAACGCAACGAATGCGCAAGCCCAAATGATTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGTGCTGCCTTGCAGCCCCTc > 4:182196/1‑149 (MQ=255) cAGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCtt > 3:170029/1‑138 (MQ=255) cAGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCtt < 4:170029/138‑1 (MQ=255) gggACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCAAGGCAGCCCTTccag < 3:343384/149‑4 (MQ=255) gACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCAAGGCAGccct > 5:120865/1‑141 (MQ=255) gACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCAAGGCAGccct < 6:120865/142‑2 (MQ=255) cTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAg < 5:85943/148‑1 (MQ=255) cTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAg < 8:322928/148‑1 (MQ=255) cATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATc > 5:78830/1‑148 (MQ=255) cATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATc > 2:135553/1‑148 (MQ=255) cATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATc < 6:78830/148‑1 (MQ=255) aTTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑a > 4:36653/1‑129 (MQ=255) aTTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑a < 3:36653/129‑1 (MQ=255) aTTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCaa < 7:173663/149‑1 (MQ=255) aTTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCaa < 1:186639/149‑1 (MQ=255) cTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAAccc < 1:91292/148‑1 (MQ=255) tCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCAAGGCAGCCCTTc > 4:62705/1‑122 (MQ=255) tCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCAAGGCAGCCCTTc < 3:62705/122‑1 (MQ=255) aagaagTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCtt < 5:65388/147‑1 (MQ=255) aagaagTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGa > 3:183143/1‑149 (MQ=255) gTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCa > 1:153462/1‑120 (MQ=255) gTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCa < 2:153462/120‑1 (MQ=255) aCGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCtt < 5:33006/149‑1 (MQ=255) cGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTg < 6:233310/149‑1 (MQ=255) gCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCaa < 2:222458/130‑1 (MQ=255) gCAACGAATGCGCAAGCCCAACTGCTTGATGAAAGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCaa > 1:222458/1‑130 (MQ=255) aaCGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGt > 2:289705/1‑149 (MQ=255) aaCGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGt > 2:213832/1‑149 (MQ=255) aTGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATc > 2:89010/1‑121 (MQ=255) aTGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATc < 1:89010/121‑1 (MQ=255) cgcAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCaa < 4:183143/149‑1 (MQ=255) aaCTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCGAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCT‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTgg < 6:286220/130‑1 (MQ=255) aaCTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTgg > 5:286220/1‑130 (MQ=255) aaCTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCga < 5:326139/149‑1 (MQ=255) aaCTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCga < 7:104354/149‑1 (MQ=255) aaCTGCTTGATGAAGGTTTGCTCAAAAGAATTTAGCAGACCTTTGGGTTATTGCAATTAGTGGCTGGAATGGCTTCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCga < 3:182196/149‑1 (MQ=255) aaCGGCTTGATGAAGGTTTGCTCACAAGATTTGAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCGTGCAGCCCCTCG‑A‑TCCCGCAGGCATACGATCCACCCTTGACGGAAACCTTGGGTTTTTTCAAGAGATGCga < 4:138770/149‑1 (MQ=255) tGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGaa > 7:291440/1‑149 (MQ=255) ttGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAacac > 6:313691/1‑149 (MQ=255) gaAGGTTTGCTCACAAGAATTAAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGCAAGGGCTGCCTTGCAGACACTCG‑A‑TCAAGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTATTTTCAACAGATGCGAGAACACGGCAt > 1:263015/1‑149 (MQ=255) tCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAAc < 2:124816/120‑1 (MQ=255) acaAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGaa < 7:245180/100‑1 (MQ=255) acaAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGaa > 8:245180/1‑100 (MQ=255) acaAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTcc > 5:26372/1‑148 (MQ=255) acaAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTcc > 6:244688/1‑148 (MQ=255) aaGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAg < 1:213832/149‑1 (MQ=255) gCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTctcc < 8:291440/149‑1 (MQ=255) cAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCga < 7:318269/114‑1 (MQ=255) cAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCga > 8:318269/1‑114 (MQ=255) cAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTctcct > 3:262689/1‑149 (MQ=255) aGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTctcctc > 8:310479/1‑149 (MQ=255) gggTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGa < 5:244688/148‑1 (MQ=255) ggcAGTTGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACTCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTg < 2:263015/147‑1 (MQ=255) gCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTg < 1:135553/149‑1 (MQ=255) ccAGTATTGGCTGGAATGGCTGCCTTTGAGCCCCTCGCACTCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCtt < 1:289705/149‑1 (MQ=255) gtagtGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGt > 7:324276/1‑149 (MQ=255) ggCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGAtg > 1:316016/1‑149 (MQ=255) gCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGAtg < 2:316016/148‑1 (MQ=255) cTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCAGGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGAtgtg > 1:213012/1‑149 (MQ=255) cTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGAtgtg < 7:310479/149‑1 (MQ=255) tGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTgg > 6:120358/1‑149 (MQ=255) aGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTCCa < 6:26372/149‑1 (MQ=255) ccTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTCCATGTGATg < 5:313691/149‑1 (MQ=255) cTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAgg < 8:97787/99‑1 (MQ=255) cTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAgg > 7:97787/1‑99 (MQ=255) ttGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAg > 4:223236/1‑97 (MQ=255) ttGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAg < 3:223236/97‑1 (MQ=255) ttGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGCTTATTTCAACAGCTGCGAGAACACCGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGAAGTGGGCCATGTGATGca > 7:257376/1‑149 (MQ=255) | ATGCGTTTACCCAGGGACATGCTCATGAATCCATTCCTCAAGAAGTTGAACGCAACGAATGCGCAAGCCCAACTGCTTGATGAAGGTTTGCTCACAAGAATTTAGCAGACCTTTGGGTTATGGCCAGTAGTGGCTGGAAGGGCTGCCTTGCAGCCCCTCG‑A‑TCACGCAGGCAAACGATCAACCCTTGACGGAAACCTTGGGTTTTTTCAACAGATGCGAGAACACGGCATGCAAATCGTCCGAGGCGCTCTCCTCGTCCAGATTCAGCTTGCTGTCGATGTGGTCCATGTGATGCA > NC_002947/4873600‑4873895 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |