| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,880,092 | C→G | 5.3% | I234M (ATC→ATG) | PP_4289 → | membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,880,092 | 0 | C | G | 5.3% | 245.5 / 3.2 | 75 | I234M (ATC→ATG) | PP_4289 | membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (33/38); new base G (2/2); total (35/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01 | |||||||||||
TCGGTAACGTGTTCCGCATCATCATGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGC > NC_002947/4879944‑4880239 | tCGGTAACGTGTTCCGCATCATCATGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTtcatc < 4:181842/149‑1 (MQ=255)tCGGTAACGTGTTCCGCATCATCATGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTtcatc < 5:311357/149‑1 (MQ=255) aCGTGTTCCGCATCATCATGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATc < 5:307667/149‑1 (MQ=255) gtgtTCCGCATCATCATGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAg > 2:79894/1‑149 (MQ=255) gtgtTCCGCATCATCATGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGATCATGATGAACAg > 1:146400/1‑149 (MQ=255) gtgtTCCGCATCATCATGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCGGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAg > 2:74986/1‑149 (MQ=255) gtTCCGCATCATCATGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTACCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGc > 7:42966/1‑148 (MQ=255) tCCGCATCATCATGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGATCATGATGAACAGCac < 2:146400/148‑2 (MQ=255) ccGCATCATCATGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAAc > 6:254089/1‑148 (MQ=255) catcatcatGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCAtt < 1:296397/149‑1 (MQ=255) atcatGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTccc < 6:48607/149‑1 (MQ=255) tcatGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTccc > 3:34890/1‑148 (MQ=255) atGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGa < 4:190748/148‑1 (MQ=255) atGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGATCATGATGAACAGCac < 5:272374/137‑2 (MQ=255) atGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGATCATGATGAACAGCac > 6:272374/1‑136 (MQ=255) atGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTACCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGa < 8:42966/148‑1 (MQ=255) tGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTcc > 4:330011/1‑144 (MQ=255) tGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTcc < 3:330011/144‑1 (MQ=255) ggCCCATCGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCTGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCt < 5:175743/149‑1 (MQ=255) ggCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCAcc > 8:320472/1‑148 (MQ=255) ccAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCt < 4:289416/146‑1 (MQ=255) ccAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCt > 3:289416/1‑146 (MQ=255) ccAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGATGTTCATCATGATCAGCAACCAGTTCCCGAGCACCTACg > 2:240030/1‑149 (MQ=255) cGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTcc > 5:352807/1‑133 (MQ=255) cGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTcc < 6:352807/133‑1 (MQ=255) gCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAg > 8:73595/1‑148 (MQ=255) gtggCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAAc < 6:49067/117‑1 (MQ=255) ggcgATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGc > 5:269744/1‑149 (MQ=255) agaACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCTCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTTGTACTGGCtaccgtag < 1:74986/149‑8 (MQ=255) agaACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTTGTACTGGCtaccgtag < 1:79894/149‑8 (MQ=255) agaACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTg < 8:239876/149‑1 (MQ=255) gaACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTgg < 4:318460/149‑1 (MQ=255) acaacCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTTCTGCGCTCTCGTCACAACAACTACTTCACCCTGCCTGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGc < 1:240030/148‑1 (MQ=255) ccAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTa > 2:227052/1‑149 (MQ=255) aGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTg > 3:271698/1‑140 (MQ=255) aGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTg < 4:271698/140‑1 (MQ=255) aGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCTGTATc < 7:320472/149‑1 (MQ=255) ccGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAATCATTTCCCGAGCACCTACGGTAGCCAGTTGTACTGGCta > 1:165481/1‑127 (MQ=255) ccGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAATCATTTCCCGAGCACCTACGGTAGCCAGTTGTACTGGCta < 2:165481/128‑2 (MQ=255) ccGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAg > 2:300712/1‑147 (MQ=255) cGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAg > 7:187910/1‑149 (MQ=255) ccGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCcgc < 7:73595/149‑1 (MQ=255) cTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTc < 8:187910/148‑1 (MQ=255) ggCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATcc < 1:300712/149‑1 (MQ=255) cAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCg < 1:289159/119‑1 (MQ=255) cAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCg > 2:289159/1‑119 (MQ=255) cAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGc > 2:209015/1‑148 (MQ=255) cAAGGGCCTGATGAGCTCGAGTCACAACAAATACTTCACCCTGCCGGTGCTCTTCATCATGATCAGCAAGCAGTTCCCGAGCACCTACGGTAGCCAGTACAACTGACTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATACGcc > 2:239411/1‑149 (MQ=255) aGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCac < 1:209015/149‑1 (MQ=255) gggCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCa < 7:82312/124‑1 (MQ=255) gggCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCa > 8:82312/1‑124 (MQ=255) gggCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCa < 1:145626/124‑1 (MQ=255) gggCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCa > 2:145626/1‑124 (MQ=255) ctgcGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTc < 4:252320/130‑1 (MQ=255) ctgcGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTc > 3:252320/1‑130 (MQ=255) ctgcGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGATAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTc < 4:34890/147‑1 (MQ=255) caacaaCTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGa > 5:18985/1‑147 (MQ=255) aacaacTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTc < 8:40240/115‑1 (MQ=255) aacaacTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTc > 7:40240/1‑115 (MQ=255) aacaacTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACAccc > 1:16859/1‑139 (MQ=255) aacaacTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACAccc < 2:16859/139‑1 (MQ=255) acaacTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGc < 1:227052/149‑1 (MQ=255) actactTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACtt > 1:128980/1‑127 (MQ=255) actactTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACtt < 2:128980/127‑1 (MQ=255) ctactTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGcaaca < 5:254089/149‑1 (MQ=255) ctTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCg < 7:154937/132‑1 (MQ=255) ctTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCg > 8:154937/1‑132 (MQ=255) ctTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGt < 6:18985/149‑1 (MQ=255) tCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGcaacaa < 7:164220/145‑1 (MQ=255) tCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGcaacaa > 8:164220/1‑145 (MQ=255) ccTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCt < 6:269744/149‑1 (MQ=255) ccTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCt > 5:295794/1‑149 (MQ=255) cTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTg > 1:146950/1‑149 (MQ=255) ccGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGcaacaa < 2:58142/137‑1 (MQ=255) ccGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGcaacaa > 1:58142/1‑137 (MQ=255) caggTGCTGTTAATCATGATCAGCAACCATTTCCCGAGCACCTAAGGTAGCCAGTACAACTGGCTGATCCTGCCCGGTATCGCAGTAGCCGCTGTTCTGATCCGCAACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCttcac > 4:109767/3‑145 (MQ=255) cTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGc < 6:295794/148‑1 (MQ=255) atcatGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCa > 7:273633/1‑95 (MQ=255) atcatGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCa < 8:273633/95‑1 (MQ=255) tcatGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGgc > 1:114326/1‑149 (MQ=255) | TCGGTAACGTGTTCCGCATCATCATGCCGGCCCAACGCCAGCTGGTGGCGGCGATCGAGAACAACCAGACGCCCGACCCGGTCCTGCCGGCCAAGGGCCTGCTGCGCTCGCGTCACAACAACTACTTCACCCTGCCGGTGCTGTTCATCATGATCAGCAACCATTTCCCGAGCACCTACGGTAGCCAGTACAACTGGCTGATCCTGGCCGGTATCGCAGTAGCCGCGGTTCTGATCCGCCACTACTTCAACACCCGCCACGACAGCAACAAGTACGCCTGGACCCTGCCCGTCGGC > NC_002947/4879944‑4880239 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |