| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 478,983 | C→G | 10.5% | Q162H (CAG→CAC) ‡ | cca ← | multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 478,983 | 0 | C | G | 10.5% | 229.8 / 13.6 | 76 | Q162H (CAG→CAC) ‡ | cca | multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase |
| Reads supporting (aligned to +/- strand): ref base C (35/33); new base G (6/2); total (41/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.95e-01 | |||||||||||
GCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATCCAGATCGTTC > NC_002947/478847‑479130 | gcagcaGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAgc > 8:290853/1‑149 (MQ=255)gcagcaGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAgc > 5:197078/1‑149 (MQ=255) gggCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCg < 7:290853/149‑1 (MQ=255) gggCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCg < 6:197078/149‑1 (MQ=255) ggCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGAGTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTCAGGCGCGGATCTGGCGCATCAGCGCCAAGCTTTCATctg > 3:230330/1‑147 (MQ=255) acacGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGttt < 4:339528/137‑1 (MQ=255) acacGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGttt > 3:339528/1‑137 (MQ=255) acacGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAAccc < 7:278914/149‑1 (MQ=255) cacGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCg < 4:49623/149‑1 (MQ=255) tCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAgc > 8:1388/1‑119 (MQ=255) tCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAgc < 7:1388/119‑1 (MQ=255) aGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCTCTCGCTCTATTTCCTTGCAGCTGCGCTCGGCAGTGAGTGCCTGTAGTTCGCCTGAGGCTCTGATCTGGCGCATCAGAGCCAAGGTTTCTTCGTTTACCTGTAACCCCAg < 4:144657/149‑1 (MQ=255) aGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCa < 6:142745/148‑1 (MQ=255) cACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGt > 6:81737/1‑123 (MQ=255) cACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGt < 5:81737/123‑1 (MQ=255) cACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAgtg > 1:185485/1‑149 (MQ=255) gaagaaTACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGA‑TTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGt > 2:200479/1‑148 (MQ=255) aagaaTACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGt > 8:107390/1‑148 (MQ=255) gaaTACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAAc > 1:302868/1‑149 (MQ=255) gaaTACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATAGGCAACCCGGAACCCCAGTGGTGCGTAAc > 3:7897/1‑149 (MQ=255) ccTGGGGTTGCTCTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGgc < 4:230330/148‑1 (MQ=255) ccTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGgc < 7:107390/148‑1 (MQ=255) ccTGCGGTTGCACTTCCATCAGCGCGCGCTCGA‑TTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGgca < 1:200479/148‑1 (MQ=255) cTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAgtg < 2:203948/134‑1 (MQ=255) ggTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCaaa < 7:12158/149‑1 (MQ=255) gCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCaaa > 4:71726/1‑145 (MQ=255) gCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCaaa < 3:71726/145‑1 (MQ=255) aCTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTg > 6:328879/1‑148 (MQ=255) aTCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAAcgcg > 6:71680/1‑149 (MQ=255) tCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAAcgcg > 4:158572/1‑148 (MQ=255) cgcTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCg < 2:185485/149‑1 (MQ=255) tttCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGa > 2:324489/1‑149 (MQ=255) cttccAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCtt > 4:73001/1‑149 (MQ=255) cttccAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGAACtt > 2:119041/1‑149 (MQ=255) ttccAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTc > 8:129304/1‑149 (MQ=255) ttccAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTc > 5:262231/1‑149 (MQ=255) aGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGc > 4:22736/1‑148 (MQ=255) aGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGc > 5:307096/1‑148 (MQ=255) tGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGgcag < 3:347082/105‑1 (MQ=255) tGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGgcag > 4:347082/1‑105 (MQ=255) tGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAAt > 7:200733/1‑149 (MQ=255) gcgcTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATg > 6:24919/1‑149 (MQ=255) gcTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGcc < 3:158572/149‑1 (MQ=255) tCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCgg > 8:76503/1‑149 (MQ=255) cGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCggg > 7:249091/1‑149 (MQ=255) gCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGa < 8:249091/149‑1 (MQ=255) agtgagtgCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGaaa < 7:129304/149‑1 (MQ=255) tgagtgCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACa > 5:84803/1‑149 (MQ=255) agtgCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATg < 2:302868/149‑1 (MQ=255) gtgCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCgcag > 3:151934/1‑109 (MQ=255) gtgCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCgcag < 4:151934/109‑1 (MQ=255) gtgCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCg < 3:24907/128‑1 (MQ=255) gtgCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCg > 4:24907/1‑128 (MQ=255) gtgCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGAACTTCGGCGAATGCCGGGGAAACATgg < 1:119041/149‑1 (MQ=255) tgCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGc < 1:324489/149‑1 (MQ=255) cAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAg > 3:262037/1‑147 (MQ=255) cAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCa < 5:71680/149‑1 (MQ=255) gCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGt < 6:307096/148‑1 (MQ=255) gCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGt < 8:200733/148‑1 (MQ=255) cTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATg < 3:176010/133‑1 (MQ=255) cTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATg > 4:176010/1‑133 (MQ=255) cTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGa < 6:262231/149‑1 (MQ=255) cttggCGCTGATGCGCCAGATCAGCGCCTAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCgca < 5:263238/89‑1 (MQ=37) cttggCGCTGATGCGCCAGATCAGCGCCTAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCgca > 6:263238/4‑92 (MQ=37) cttggCGCTGATGCGCCAGATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGAt > 1:86135/4‑149 (MQ=255) cttggCGCTGATGCGCCAGATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGAt > 1:66362/4‑149 (MQ=255) ttggCGCTGATGCGCCAGATCAGCGCCTAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATc > 4:190807/3‑149 (MQ=255) ttggCGCTGATGCGCCAGATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGt < 1:227745/133‑1 (MQ=255) ttggCGCTGATGCGCCAGATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGt > 2:227745/3‑135 (MQ=255) ttggCGCTGATGCGCCAGATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATc > 6:70892/3‑149 (MQ=255) aGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATcc < 4:262037/149‑1 (MQ=255) cgcTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATCCAGa < 7:76503/149‑1 (MQ=255) tGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCgg < 7:29508/105‑1 (MQ=255) tGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCgg > 8:29508/1‑105 (MQ=255) tGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATCCAGATCg > 8:151632/1‑149 (MQ=255) gATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGTAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATCCAGATCGt > 2:100525/1‑149 (MQ=255) cTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATCCAGATCGTTc < 3:22736/148‑1 (MQ=255) | GCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGTGCAACGCGCAGCACCCGCAAAGGATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATCCAGATCGTTC > NC_002947/478847‑479130 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |