| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,980,354 | T→G | 6.4% | intergenic (‑145/+16) | flgF ← / ← PP_4387 | flagellar basal‑body rod protein FlgF/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,980,354 | 0 | T | G | 6.4% | 226.6 / 4.4 | 74 | intergenic (‑145/+16) | flgF/PP_4387 | flagellar basal‑body rod protein FlgF/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (31/37); new base G (3/2); total (35/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CACAGTTTCTCCTCTGCGCGTAGCTGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAACACAGGTAGCGGCCGGTGACCAGGCTTTGCCATTGATAGAACGGGGCGGGGGCA > NC_002947/4980207‑4980499 | cacaGTTTCTCCTCTGCGCGTAGCTGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTg > 2:5613/1‑149 (MQ=255) acaGTTTCTCCTCTGCGCGTAGCTGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGc > 4:259817/1‑149 (MQ=255) caGTTTCTCCTCTGCGCGTAGCTGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCg > 3:284710/1‑149 (MQ=255) aGTTTCTCCTCTGCGCGTAGCTGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCgg > 4:343209/1‑149 (MQ=255) gTTTCTCCTCTGCGCGTAGCTGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGc < 1:5613/149‑1 (MQ=255) tttCTCCTCTGCGCGTAGCTGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGc > 5:125921/1‑148 (MQ=255) ttCTCCTCTGCGCGTAGCTGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGc > 8:215583/1‑147 (MQ=255) ctctGCGCGTAGCTGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGc < 4:220210/148‑1 (MQ=255) ctctGCGCGTAGCTGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCAGCCTGCGGCAAGGGCt > 8:81489/1‑149 (MQ=255) tctGCGCGTAGCTGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCtt > 7:63781/1‑149 (MQ=255) tGCGCGTAGCTGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCtt < 8:63781/147‑1 (MQ=255) cgcgTAGCTGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCt < 2:209437/148‑1 (MQ=255) cgcgTAGCTGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCt > 5:336568/1‑148 (MQ=255) tAGCTGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATg < 5:17558/149‑1 (MQ=255) aGCTGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATgg > 3:232219/1‑149 (MQ=255) tGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGgcg > 8:60825/1‑149 (MQ=255) gcgcTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTg > 4:63364/1‑134 (MQ=255) gcgcTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTg < 3:63364/134‑1 (MQ=255) gcgcTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCgg > 7:142735/1‑148 (MQ=255) gcgcTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGc < 4:232219/149‑1 (MQ=255) tCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAggc < 5:122974/147‑1 (MQ=255) gCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCgttgtt < 5:103888/149‑1 (MQ=255) gCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCgttgtt < 8:142735/149‑1 (MQ=255) gTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATg < 3:302674/124‑1 (MQ=255) gTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATg > 4:302674/1‑124 (MQ=255) ttCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGgcggcg < 3:243382/139‑1 (MQ=255) ttCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGgcggcg > 4:243382/1‑139 (MQ=255) ttCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGCGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAgg > 7:246514/1‑149 (MQ=255) ccAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAggg < 7:215583/148‑1 (MQ=255) cAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGc < 5:182089/149‑1 (MQ=255) aaGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGc > 8:27763/1‑148 (MQ=255) aaGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCAGGCGGCaaa < 7:128919/106‑2 (MQ=255) aaGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCAGGCGGCaaa < 7:124156/106‑2 (MQ=255) aaGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCAGGCGGCaaa > 8:128919/1‑105 (MQ=255) aaGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCAGGCGGCaaa > 8:124156/1‑105 (MQ=255) aataatTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCagag > 1:290332/1‑149 (MQ=255) atTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGTATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCgtt < 4:139415/129‑1 (MQ=255) atTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCgtt > 3:139415/1‑129 (MQ=255) atTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGgc < 7:216157/149‑1 (MQ=255) ttGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGgcg > 5:243399/1‑149 (MQ=255) ttGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGAGTTGTTGTAGGGGCCAGAGTGgc > 3:294152/1‑148 (MQ=255) aCCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCAcc > 1:157912/1‑149 (MQ=255) ccAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTAAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCAcc > 1:77080/1‑148 (MQ=255) gAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTg > 7:157090/1‑149 (MQ=255) acacCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGccc < 7:81489/149‑1 (MQ=255) cacCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCg > 1:230457/1‑149 (MQ=255) acCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCgg > 8:13142/1‑149 (MQ=255) acCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCgg > 4:251719/1‑149 (MQ=255) cccGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCa < 6:182648/100‑1 (MQ=255) cccGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCa > 5:182648/1‑100 (MQ=255) ccGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGAGGGAATTTTTCCCCCATCCGCAAAGGCATTCAGAATTGGCGCCGCAAGCCGCGTTGTTTTATGGGCCAGAGTTGCGCAACCAGGCATTTCCCCGGt > 1:87522/1‑149 (MQ=255) gTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTtgt < 7:60825/149‑1 (MQ=255) aCGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTggg < 8:157090/148‑1 (MQ=255) cGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGcc > 2:271967/1‑149 (MQ=255) cGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGc < 2:87522/148‑1 (MQ=255) gggCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGa < 6:336568/149‑1 (MQ=255) ggCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGGGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGaa < 6:243399/149‑1 (MQ=255) gCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAac < 7:13142/149‑1 (MQ=255) cAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAACACAg < 2:290332/148‑1 (MQ=255) cAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAACACAg < 3:251719/148‑1 (MQ=255) aGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAACACAgg < 2:230457/148‑1 (MQ=255) ggggCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAACACAGGTAGCGGCCGGt < 2:77080/149‑1 (MQ=255) aaTACCCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAACACAGGTAGCGGCCGGTGACCa < 8:246514/149‑1 (MQ=255) tCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAACACAGGTAGCGGCCGGTGACCAGGCTTTGc < 3:343209/149‑1 (MQ=255) gTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAACACAGGTAGCGGCCGGTGACCAGGCTTTGCCAt < 1:271967/149‑1 (MQ=255) tttGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAACACAg > 7:209965/1‑120 (MQ=255) tttGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAACACAg < 8:209965/120‑1 (MQ=255) gTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAACACAGGTAGCGGCCGGTGACCAGGCTTTGCCATTGa < 7:27763/148‑1 (MQ=255) tCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAACACAGGTAGCGGCCGGTGACCAGGCTTTGCCATTGATa < 4:294152/149‑1 (MQ=255) ccttGCCGCAGGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAACACAGGTAGCGGCCGGTGACCAGGCTTTGCCATTGATAGAAcggggc > 8:261354/3‑149 (MQ=255) gccgccTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAACACAGGTAGCGGCCGGTGACCAGGCTTTGCCATTGATAGAAcggggcggg < 4:284710/148‑1 (MQ=255) gccTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGACCACAGGTAGCGGCGGGTGCCCAGGCGTTGCCATTGATAGCACGGGgcggggg > 4:39413/1‑147 (MQ=255) gccTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAACACAGGTAGCGGCCGGTGACCAGGCTTTGCCATTGATAGAACGGGgcgggggca < 2:157912/149‑1 (MQ=255) cTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAACACAGGTAGCGGCCGGTGACCAGGCTTTGCCAtt < 6:176545/127‑1 (MQ=255) | CACAGTTTCTCCTCTGCGCGTAGCTGCCGCGCTGTCACTGGGCAGGTTCCAAGCAATAATTGAACCAAGTCTGAAACACCCGGTTTACGGGGCTTTCAGCGCGGCAAGGGGCAATAACCGTCAGTTTGTCGGCGGATGTTTGCCGCCTGCGGCAAGGGCTTGCTCAATGGGCGCGGCAGGCGGCGTTGTTGTAGGGGCCAGAGTGGCGCACCCAGCCTTTGCCCGGGTTGTGGGCCGAACACAGGTAGCGGCCGGTGACCAGGCTTTGCCATTGATAGAACGGGGCGGGGGCA > NC_002947/4980207‑4980499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |