Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,096,978 G→T 6.0% noncoding (55/86 nt) PP_mr66 → P6

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,096,9780GT 6.0% 212.9 / 3.8 67noncoding (55/86 nt)PP_mr66P6
Reads supporting (aligned to +/- strand):  ref base G (35/27);  new base T (2/2);  total (38/29)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.82e-01

AACGCGAGCCGCGCAGGGTTCGACCAAGGCCGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATGCACAAAATGCTGACTCCGATGCACCGAAACGGGCCGGAATT  >  NC_002947/5096832‑5097124
                                                                                                                                                   |                                                                                                                                                  
aaCGCGAGCCGCGCAGGGTTCGACCAAGGCCGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTg                                                                                                                                                  >  1:214577/1‑149 (MQ=255)
aaCGCGAGCCGCGCAGGGTTCGACCAAGGCCGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTg                                                                                                                                                  <  5:222553/149‑1 (MQ=255)
    cgAGCCGCGCAGGGTTCGACCAAGGCCGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGa                                                                                                                                              <  5:274120/149‑1 (MQ=255)
        ccGCGCAGGGTTCGACCAAGGCTGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCATTGCatattct                                                                                                                                          >  5:30718/1‑143 (MQ=255)
        ccGCGCAGGGTTCGACCAAGGCCGCATACCACGAGCGAGTGAGTGGCATGTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAata                                                                                                                                           >  1:257906/1‑149 (MQ=255)
           cgcAGGGTTCGACCAAGGCCGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCa                                                                                                                                       <  7:174007/149‑1 (MQ=255)
            gcAGGGTTCGACCAAGGCCGCATACCACGAGCGAGTGAGCGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCaa                                                                                                                                      >  7:50995/1‑149 (MQ=255)
             cAGGGTTCGACCAAGGCCGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAAt                                                                                                                                     <  1:161350/149‑1 (MQ=255)
                ggTTCGACCAAGGCCGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGgc                                                                                                                                  <  2:174748/149‑1 (MQ=255)
                ggTTCGACCAAGGCCGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGgc                                                                                                                                  <  2:214577/149‑1 (MQ=255)
                  ttCGACCAAGGCCGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGAAGAATATGCAATGgcg                                                                                                                                 >  6:166946/1‑148 (MQ=255)
                     gACCAAGGCCGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCATTGCATATTCTGCACTGgctgtc                                                                                                                              >  3:321746/1‑144 (MQ=255)
                     gACCAAGGCCGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGgcgc                                                                                                                                >  2:151607/1‑146 (MQ=255)
                      aCCAAGGCTGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCATTGCATATTCTGCACTGgctgtcaa                                                                                                                            <  6:30718/149‑7 (MQ=255)
                       ccAAGGCCGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCATTGCATATTCTGCACTGgctgtcgac                                                                                                                           <  4:321746/149‑8 (MQ=255)
                         aaGGCCGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGaaa                                                                                                                          >  1:347091/1‑148 (MQ=255)
                          aGGCCGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGt                                                                                                                                                   >  3:283671/1‑122 (MQ=255)
                          aGGCCGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGt                                                                                                                                                   <  4:283671/122‑1 (MQ=255)
                                    ccACGAGCGAGTGAGCGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCtata                                                                                                               <  8:50995/148‑1 (MQ=255)
                                      aCGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTg                                                                                                                                                  >  6:80674/1‑111 (MQ=255)
                                                 agtgGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTc                                                                                                  <  1:151607/148‑1 (MQ=255)
                                                     gCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCGGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTggg                                                                                             >  5:213656/1‑149 (MQ=255)
                                                     gCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGgcgc                                                                                                                                <  1:162348/114‑1 (MQ=255)
                                                     gCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGgcgc                                                                                                                                >  2:162348/1‑114 (MQ=255)
                                                     gCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTgg                                                                                              <  2:257906/148‑1 (MQ=255)
                                                     gCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTgg                                                                                              <  3:101185/148‑1 (MQ=255)
                                                       aTTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCtata                                                                                                               >  7:129863/1‑129 (MQ=255)
                                                       aTTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCtata                                                                                                               <  8:129863/129‑1 (MQ=255)
                                                              aCGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCtattat                                                                                     >  7:1948/1‑149 (MQ=255)
                                                                gACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTgg                                                                                              <  6:1756/138‑1 (MQ=255)
                                                                gACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTgg                                                                                              >  5:1756/1‑138 (MQ=255)
                                                                 aCAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTgg                                                                                  <  7:271573/149‑1 (MQ=255)
                                                                      ccGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAg                                                                             >  3:71244/1‑149 (MQ=255)
                                                                          tAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCGGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCtt                                                                         <  6:213656/149‑1 (MQ=255)
                                                                             tCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTa                                                                      >  6:223220/1‑149 (MQ=255)
                                                                               gATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTac                                                                     >  2:4763/1‑148 (MQ=255)
                                                                                         cAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAg                                                            <  1:4763/147‑1 (MQ=255)
                                                                                          aaaGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGc                                                         <  2:347091/149‑1 (MQ=255)
                                                                                            aGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCat                                                       >  8:234879/1‑148 (MQ=255)
                                                                                             gCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGc                                                      >  5:283626/1‑149 (MQ=255)
                                                                                                    ctactTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGt                                                                       >  2:193891/1‑125 (MQ=255)
                                                                                                    ctactTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATACCTGGGCCTATTATTGGCAAAGCCTTGt                                                                       <  1:193891/125‑1 (MQ=255)
                                                                                                     tactAATACAAGCGCATCAAACCGCAGCGGGCGATGATGACAGCCACTGAAGAAAATGAAATGGCGCAAGAAATAGAAACTATATACCTAGCAATTACTGGTCCTATTATTAGCAAAGCATTTTACGACGCCAAGTACAGAGtcaatt                                               >  4:217741/1‑143 (MQ=255)
                                                                                                        ttATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATg                                           <  5:223220/149‑1 (MQ=255)
                                                                                                          ataGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATa                                                                                                                        >  3:300266/1‑70 (MQ=255)
                                                                                                          ataGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATa                                                                                                                        <  4:300266/70‑1 (MQ=255)
                                                                                                          ataGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGc                                                                            <  8:308285/114‑1 (MQ=255)
                                                                                                              aaGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTg                                                   >  5:281102/1‑135 (MQ=255)
                                                                                                              aaGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTg                                                   <  6:281102/135‑1 (MQ=255)
                                                                                                              aaGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATGCACaa                                      >  2:207653/1‑148 (MQ=255)
                                                                                                                  gcCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATGCACAAAATGc                                 >  6:12469/1‑149 (MQ=255)
                                                                                                                   ccTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGt                                                                       >  6:220830/1‑110 (MQ=255)
                                                                                                                     tGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAATAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATGCACAAAATGCTg                               >  1:266916/1‑148 (MQ=255)
                                                                                                                     tGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATGCACAAAATGCTGa                              >  5:334719/1‑149 (MQ=255)
                                                                                                                         aCCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGCCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCt                                                >  2:85922/1‑127 (MQ=255)
                                                                                                                         aCCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGCCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCt                                                <  1:85922/127‑1 (MQ=255)
                                                                                                                          ccgccgCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATGCACAAAATGCTGACTcc                          >  6:158244/1‑148 (MQ=255)
                                                                                                                           cgccgcGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATGCACAAAATGCTGACTCCGa                        <  4:71244/149‑1 (MQ=255)
                                                                                                                                  ggCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATGCACAAAATGCTGACTCCGATGCAcc                  >  6:160610/1‑148 (MQ=255)
                                                                                                                                  ggCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATGCACAAAATGCTGACTCCGATGCAcc                  >  4:337508/1‑148 (MQ=255)
                                                                                                                                  ggCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATGCACAAAATGCTGACTCCGATGCAcc                  >  8:307334/1‑148 (MQ=255)
                                                                                                                                   gCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATGcac                                        >  4:298333/1‑125 (MQ=255)
                                                                                                                                   gCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATGcac                                        <  3:298333/125‑1 (MQ=255)
                                                                                                                                     gATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATGCACAAAATGCTGACTCCGATGCACCGaaa              <  3:217741/149‑1 (MQ=255)
                                                                                                                                         ttGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATGCACAAAATGCTGACTCCGATGCACCGAAACggg          >  3:305693/1‑149 (MQ=255)
                                                                                                                                            aCAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATGCACAAAATGCTGACTCCGATGCACCGAAACGGGCCg       >  3:131166/1‑149 (MQ=255)
                                                                                                                                                 cAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATGCACAAAATGCTGACTCCGATGCACCGAAACGGGCCGGAAtt  >  5:266959/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
AACGCGAGCCGCGCAGGGTTCGACCAAGGCCGCATACCACGAGCGAGTGAGTGGCATTTTAACGACAGCCCGGTAGTCGATATTTCTTCAAAGCGACAACTACTTATAGAAGCGCCTGAAACCGCCGCGGGCGATGTTGACAGCCAGTGCAGAATATGCAATGGCGCAAGAAATAGAACCTATAGACCTAGCAATTCCTGGGCCTATTATTGGCAAAGCCTTGTACGACGGCAAGTGCAGCGTGCCTTGATGCACAAAATGCTGACTCCGATGCACCGAAACGGGCCGGAATT  >  NC_002947/5096832‑5097124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: