| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,148,214 | T→A | 5.3% | intergenic (+17/+56) | mscMB → / ← PP_5695 | miniconductance mechanosensitive channel protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,148,214 | 0 | T | A | 5.3% | 262.7 / 2.6 | 87 | intergenic (+17/+56) | mscMB/PP_5695 | miniconductance mechanosensitive channel protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (41/40); new base A (3/2); total (45/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
GCCGGAGTTCGGCTTGAGCCTGTATCAGCAGCCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCGAAGCCCAGATTAGCTGAGGTTT > NC_002947/5148077‑5148362 | gCCGGAGTTCGGCTTGAGCCTGTATCAGCAGCCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCt > 6:125418/1‑148 (MQ=255) ccGGAGTTCGGCTTGAGCCTGTATCAGCAGCCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTa > 4:290783/1‑149 (MQ=255) ccGGAGTTCGGCTTGAGCCTGTATCAGCAGCCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTa > 6:175690/1‑149 (MQ=255) cGGAGTTCGGCTTGAGCCTGTATCAGCAGCAGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGAGTACGTCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGccccacat > 3:170970/1‑145 (MQ=255) cGGAGTTCGGCTAGAGCCTGTTTCAGCAGCCGAGTGGCATTGACATGCGGGGGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGATGCCTGAGATTG‑CCGTGGCTGCCTTGCAGccc < 4:170970/144‑1 (MQ=255) ggAGTTCGGCTTGAGCCTGTATCAGCAGCCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTAc > 6:16844/1‑148 (MQ=255) gAGTTCGGCTTGAGCCTGTATCAGCAGCCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGa < 4:157745/149‑1 (MQ=255) ttCGGCTTGAGCCTGTATCAGCAGCCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGcc < 4:143564/149‑1 (MQ=255) ttCGGCTTGAGCCTGTATCAGCAGCCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGc > 5:352325/1‑148 (MQ=255) gCCTGTATCAGCAGCCGATTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGct < 7:308272/148‑1 (MQ=255) gCCTGTATCAGCAGCCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCCAGGCCGctc > 6:250196/1‑149 (MQ=255) ccTGTATCAGCAGCCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGctct > 5:217155/1‑149 (MQ=255) tCAGCAGCCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑Caaa < 1:56642/148‑1 (MQ=255) tCAGCAGCCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAg > 2:149688/1‑149 (MQ=255) gcagcCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCGTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAg > 3:192661/1‑149 (MQ=255) gcCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAgcgg > 1:973/1‑149 (MQ=255) ccGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAgcggc > 6:133783/1‑149 (MQ=255) aGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGcccc < 2:166901/113‑1 (MQ=255) gTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGga < 6:352325/149‑1 (MQ=255) tGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGgat > 2:21727/1‑149 (MQ=255) aaTGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGatgatg > 2:95031/1‑149 (MQ=255) tGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGgt < 5:175690/149‑1 (MQ=255) aTGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGgt < 8:97332/145‑1 (MQ=255) aTGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGgt > 7:97332/1‑145 (MQ=255) tGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCAAGGCAGccccg > 6:176799/1‑100 (MQ=255) tGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCAAGGCAGccccg < 5:176799/101‑2 (MQ=255) cgcgTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTaa < 1:149688/148‑1 (MQ=255) gcgTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑Caaa < 4:57317/122‑1 (MQ=255) gcgTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑Caaa > 3:57317/1‑122 (MQ=255) gcgTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAgg < 6:217155/149‑1 (MQ=255) cgTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAggg < 5:133783/149‑1 (MQ=255) ggCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGc < 3:63211/84‑1 (MQ=255) ggCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGc > 4:63211/1‑84 (MQ=255) ggCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTtcat > 8:231720/1‑148 (MQ=255) gCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTtcatc < 7:231720/148‑1 (MQ=255) cGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATg < 2:973/149‑1 (MQ=255) gggCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGc > 6:301987/1‑149 (MQ=255) ggCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGcc < 5:125418/149‑1 (MQ=255) tACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGtttt > 3:280548/1‑136 (MQ=255) tACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGtttt < 4:280548/136‑1 (MQ=255) ggcggcggAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCa < 4:225021/149‑1 (MQ=255) ggcggAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGca > 3:290039/1‑149 (MQ=255) ggcggAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAAGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGca > 1:285701/1‑149 (MQ=255) gcggAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAgg > 4:325884/1‑84 (MQ=255) gcggAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAgg < 3:325884/84‑1 (MQ=255) ggAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGcatca < 5:301987/149‑1 (MQ=255) ccGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGttt > 4:82446/1‑113 (MQ=255) ccGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGttt < 3:82446/113‑1 (MQ=255) gCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATcat‑gcat > 5:233398/1‑145 (MQ=255) gCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATcat‑ccat < 6:233398/145‑1 (MQ=255) cTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGcatc < 5:234776/129‑1 (MQ=255) cTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGcc > 7:334611/1‑148 (MQ=255) ttGAAGAAATGAGCGAGGCCTGAGATTGCCCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTg > 1:30656/1‑145 (MQ=255) ttGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTTGCATGCAGCCCCATAAGAGCCAAAGCCCCTCAT‑CAAAGCTGCGGCGGGATGAAGGTGTTTTAGGGGTTTTAATCATAGCCAATTAACCAAAAT‑CCATAAGCGCCATGGCCa > 2:320903/1‑148 (MQ=255) ttGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTg < 2:30656/144‑1 (MQ=255) tGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTAATCATGCCCAATTCAGCATCAT‑CCATCAACCCCTTGGCCaat > 4:341586/1‑148 (MQ=255) gaagaaATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCaa < 1:320903/147‑1 (MQ=255) gaagaaATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAg < 1:95031/148‑1 (MQ=255) aagaaATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAgg > 2:32561/1‑148 (MQ=255) agaaATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGca < 4:192661/149‑1 (MQ=255) attcgCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACaga < 1:233868/145‑1 (MQ=255) aTGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACaga < 8:334611/149‑1 (MQ=255) gAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGcc < 2:160145/137‑1 (MQ=255) gAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGcc > 1:160145/1‑137 (MQ=255) aGCGAGGCCTGAGATTG‑GCGGGGCTGCCTTGCATGCCCTTACGAGCCAATGCCGGTCTG‑CAAAGGATCGGCGGGATGATGGTGTTTAATGGGTTTTCATCATGCCCAATTCAGCATCATACCATCAGCGCCTTGGCCAAGGCACagag < 1:21727/148‑1 (MQ=255) aGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAgg < 5:320484/148‑1 (MQ=255) gAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGt < 3:290783/149‑1 (MQ=255) ccTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTgg > 7:185321/1‑127 (MQ=255) ccTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTgg < 8:185321/127‑1 (MQ=255) cTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCg > 2:64905/1‑147 (MQ=255) cTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCg > 5:252387/1‑147 (MQ=255) tGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCGAAg > 3:90528/1‑149 (MQ=255) gggttG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTa < 4:12252/136‑1 (MQ=255) aTTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCGAAGcc > 5:93607/1‑147 (MQ=255) gtaaggggCTGCAAGGCAGCCCCTTACGAGCCAAGGCCGCTCTGTGAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCGAAGcc > 1:248139/5‑146 (MQ=255) ccGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCGAAGCCCAGAt > 3:149755/1‑148 (MQ=255) ccGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCGAAGCCCAGAt > 5:305868/1‑148 (MQ=255) ccGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATACAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCGAAGCCCAGAt > 5:113983/1‑148 (MQ=255) aaggggCTGCAAGGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCGAAGCCCAGAt < 2:248139/146‑1 (MQ=255) cGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCGAAGCCCAGAt > 6:127980/1‑147 (MQ=255) cGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCGAAGCCCAGATTa < 4:290039/149‑1 (MQ=255) gggCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCGAAGCCCAGATTAGc < 4:90528/149‑1 (MQ=255) gCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCGAAGCCCAGATTAGCt > 3:185949/1‑148 (MQ=255) gCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCGAAGCCCAGATTAGCTg < 2:285701/149‑1 (MQ=255) gCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTg < 5:183353/108‑1 (MQ=255) gCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTg > 6:183353/1‑108 (MQ=255) gCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCGAAGCCCAGATTAGCTGAgg > 8:859/1‑149 (MQ=255) ttGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCGAAGCCCAGATTAGCTGAGGttt > 5:210830/1‑149 (MQ=255) | GCCGGAGTTCGGCTTGAGCCTGTATCAGCAGCCGAGTGGCAATGACATGCGCGTGGGGTTGGCCGGGCGTACGGCGGCGGAGCCGATGCCGCGACACCTTGAAGAAATGAGCGAGGCCTGAGATTG‑CCGGGGCTGCCTTGCAGCCCCTTACGAGCCAAGGCCGCTCTG‑CAAAGGAGCGGCGGGATGATGGTGTTTAAGGGGTTTTCATCATGCCCAATTCAGCATCAT‑CCATCAGCGCCTTGGCCAAGGCACAGAGGTAGTGCGAAGCCCAGATTAGCTGAGGTTT > NC_002947/5148077‑5148362 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |