| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,149,440 | C→A | 8.6% | intergenic (‑426/+22) | PP_mr51 ← / ← PP_4535 | C4 ncRNA/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,149,440 | 0 | C | A | 8.6% | 212.6 / 9.2 | 70 | intergenic (‑426/+22) | PP_mr51/PP_4535 | C4 ncRNA/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (34/30); new base A (2/4); total (36/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.89e-01 | |||||||||||
TGCGCGCGTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTT > NC_002947/5149294‑5149585 | tGCGCGCGTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATc < 8:203755/147‑1 (MQ=255) tGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTg > 8:71827/1‑148 (MQ=255) gAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGGGGGGATAGCCTCCTGGtt < 4:239740/146‑1 (MQ=255) gAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGGGGGGATAGCCTCCTGGTTg < 3:131906/147‑1 (MQ=255) gAGTCGCTGAGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGtt < 4:120924/146‑1 (MQ=255) aGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGaa < 7:329460/149‑1 (MQ=255) aGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGaa < 4:347707/149‑1 (MQ=255) gTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACATCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAAc < 7:71827/149‑1 (MQ=255) gtgCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGt > 2:298019/1‑149 (MQ=255) ttCTGAATGACCACGAGCAATAATACTCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCGCATGCTACTTCCAACCAGTAGGCAATCCCCCCCTGGTTGGAACTTCAGTTACTc < 6:147301/149‑1 (MQ=255) tCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGGGGGGATAGCCTCCTGGTTg < 7:216056/133‑1 (MQ=39) tCTGAATGACCACGAGCAATAAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGGGGGGATAGCCTCCTGGTTg > 8:216056/1‑133 (MQ=38) tGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAAt > 5:193586/1‑148 (MQ=255) aCCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCa < 1:298019/148‑1 (MQ=255) ccACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGa > 7:19415/1‑149 (MQ=255) cACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGAc > 5:348388/1‑149 (MQ=255) tCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGt‑t > 3:226484/1‑148 (MQ=255) tCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑tc < 6:348388/149‑1 (MQ=255) cGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCAc < 8:19415/149‑1 (MQ=255) gCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACcgcgc < 6:53096/139‑1 (MQ=255) gCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACcgcgc > 5:53096/1‑139 (MQ=255) ataataCATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATc > 7:223883/1‑128 (MQ=255) ataataCATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATc < 8:223883/128‑1 (MQ=255) ataCATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCCCCGAgcg > 1:330453/1‑149 (MQ=255) taCATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAgcgc > 1:241051/1‑149 (MQ=255) tAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGAc < 4:226484/149‑1 (MQ=255) aaTGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGAc > 8:121418/1‑148 (MQ=255) gtCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGt > 5:178081/1‑148 (MQ=255) cACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTc < 8:319773/149‑1 (MQ=255) cACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTc > 7:319773/1‑149 (MQ=255) cACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTc > 5:244793/1‑149 (MQ=255) aCGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGAc < 3:338384/139‑1 (MQ=255) aCGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGAc > 4:338384/1‑139 (MQ=255) gccgccCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCg > 1:224207/1‑147 (MQ=255) gccgccCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCg > 7:164120/1‑147 (MQ=255) gccgccCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑aa < 8:164120/149‑1 (MQ=255) gccgccCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑aa < 2:224207/149‑1 (MQ=255) gccATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACa > 6:328682/1‑146 (MQ=255) gccATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACa < 5:328682/146‑1 (MQ=255) gccATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAg < 6:193586/149‑1 (MQ=255) gccATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAg < 2:241051/149‑1 (MQ=255) atatCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTg < 6:178081/149‑1 (MQ=255) tCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTa < 8:189248/85‑1 (MQ=255) tCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTa > 7:189248/1‑85 (MQ=255) cTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCt > 2:223138/1‑149 (MQ=255) ttGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑ACGACa < 1:236428/138‑1 (MQ=255) ttGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTg > 1:236587/1‑149 (MQ=255) ttGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTg > 6:184152/1‑149 (MQ=255) cTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAgg < 4:146376/149‑1 (MQ=255) ttCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGc > 4:245800/1‑149 (MQ=255) ttCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGc > 2:213147/1‑149 (MQ=255) cAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGt > 1:38184/1‑149 (MQ=255) aTCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGTGATCGCa < 6:244793/149‑1 (MQ=255) ccTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGTGATCGCAGa > 4:331866/1‑149 (MQ=255) cTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGTGATCGCAGa < 5:184152/148‑1 (MQ=255) cTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGTGATCGCAGa < 3:331866/148‑1 (MQ=255) cTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGTGATCGCAGAc < 7:121418/149‑1 (MQ=255) tCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCaa > 4:14296/1‑118 (MQ=255) tCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCaa < 3:14296/118‑1 (MQ=255) ccAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGTGATCGCAGACAATGa > 8:157271/1‑149 (MQ=255) cAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CAGCAGGCCATCCGCGTGATCGCAGACAATGAt > 3:211878/1‑149 (MQ=255) aaGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAACCGGCAGGCCATCCGCGTGATCGCAGACAATGAt < 1:223138/149‑1 (MQ=255) ttCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGTGATCGCAGa > 2:252361/1‑138 (MQ=255) gtCCAACCATGATGCTATCCCCCCCTTGTTGGTAATTCAGTTACTCGGCAATCAGACCGCGCGT‑TGTCCACCGTGCGCGGTCGTAGTCCTCGCAAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGTGATCGCAGa < 1:252361/138‑1 (MQ=255) aaCCAGGGGGGGATAGCCTCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGt < 1:127497/125‑1 (MQ=38) aaCCAGGGGGGGATAGCCTCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGt > 2:127497/1‑125 (MQ=38) aaCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGc < 7:167756/148‑1 (MQ=255) aaCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGc > 8:167756/1‑148 (MQ=255) aaCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCt > 6:355896/1‑149 (MQ=255) aCCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGTAGCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCt > 1:274345/1‑149 (MQ=255) tATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGtt > 1:234168/1‑149 (MQ=255) | TGCGCGCGTCTTGAGTCGCTGTGCATTCTGAATGACCACGAGCAATCAGACGCATAATACATAATGTGTCCACGCCGCCCGCCATATCTTGGCTTCAACTTCAGTGTCCAAGCCAATCCTCATCCAAGTTCCAACCAGGAGGCTATCCCCCCCTGGTTGGAACTTCAGTTACTCGGCAATCAGACCGCGCGT‑TCTCCACCGAGCGCGGACGAAGTCCTCG‑AAGACATAGTTGCCCTGCAA‑CGGCAGGCCATCCGCGTGATCGCAGACAATGATTTGCGGCTTGACGCCGGTT > NC_002947/5149294‑5149585 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |