| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 87,493 | T→A | 6.5% | N98I (AAT→ATT) | PP_0076 ← | choline betaine‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 87,493 | 0 | T | A | 6.5% | 236.0 / 5.2 | 77 | N98I (AAT→ATT) | PP_0076 | choline betaine‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (34/38); new base A (2/3); total (36/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
CGATTCCGTACAGTTTTTTGTCGAACTGCCCGGCGTGTTTTTGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATCTTCACCTGGTAACCCAGGCTTTCCAGTAACAG > NC_002947/87347‑87641 | cGATTCCGTACAGTTTTTTGTCGAACTGCCCGGCGTGTTTTTGCAGGTCAGCGAAGTCCTTCTCCCGGGCATTCGACACATAGTCGGGAACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGGGCGACAGCTGCTGCACATCGCCATTg < 4:306278/149‑1 (MQ=255) cGTACAGTTTTTTGTCGAACTGCCCGGCGTGTTTTTGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGAt < 3:139256/148‑1 (MQ=255) cGTACAGTTTTTTGTCGAACTGCCCGGCGTGTTTTTGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTAGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGTGAt < 1:117036/148‑1 (MQ=255) gTACAGTTTTTTGTCGAACTGCCCGGCGTGTTTTTGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATg > 1:316201/1‑148 (MQ=255) tACAGTTTTTTGTCGAACTGCCCGGCGTGTTTTTGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGaa < 5:115094/149‑1 (MQ=255) tACAGTTTTTTGTCGAACTGCCCGGCGTGTTTTTGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCAATGGCGATgtg < 4:23961/149‑3 (MQ=255) gTTTTTTGTCGAACTGCCCGGCGTGTTTTTGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGAt < 4:136701/142‑1 (MQ=255) gTTTTTTGTCGAACTGCCCGGCGTGTTTTTGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGAt > 3:136701/1‑142 (MQ=255) gTTTTTTGTCGAACTGCCCGGCGTGTTTTTGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTg > 3:225878/1‑149 (MQ=255) ttttttGTCGAACTGCCCGGCGTGTTTTTGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGt > 1:117515/1‑149 (MQ=255) gTCGAACTGCCCGGCGTGTTTTTGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATgg < 2:117515/148‑1 (MQ=255) gAACTGCCCGGCGTGTTTTTGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCAt > 3:73214/1‑125 (MQ=255) gAACTGCCCGGCGTGTTTTTGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCAt < 4:73214/125‑1 (MQ=255) gAACTGCCCGGCGTGTTTTTGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACtt < 6:3646/138‑1 (MQ=255) gAACTGCCCGGCGTGTTTTTGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACtt > 5:3646/1‑138 (MQ=255) gCGTGTTTTTGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTgcgc > 6:72242/1‑149 (MQ=255) ttGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATc < 4:225878/148‑1 (MQ=255) aGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGtt > 7:22771/1‑149 (MQ=255) tCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTcc < 8:22771/149‑1 (MQ=255) aGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTcc > 3:112094/1‑147 (MQ=255) aaGTCCTTCACCCCGGCATTCCACACTTAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCTTTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGaa < 2:7442/149‑1 (MQ=255) aaGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGaa < 5:72242/149‑1 (MQ=255) aGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAg < 2:316201/149‑1 (MQ=255) aGTCCTTCACCCCGGCATTCCACACATAGTCGGGCAATGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAg < 8:321191/149‑1 (MQ=255) cTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGaa < 2:249308/111‑1 (MQ=255) cTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGaa > 1:249308/1‑111 (MQ=255) cTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGt > 1:201418/1‑149 (MQ=255) cACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTc < 2:201418/147‑1 (MQ=255) cACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCg < 4:112094/148‑1 (MQ=255) cccGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACtt < 6:37592/96‑1 (MQ=255) cccGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCt > 2:255087/1‑149 (MQ=255) cccGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCt > 6:318172/1‑149 (MQ=255) ccGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGaa > 4:823/1‑137 (MQ=255) ccGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGaa < 3:823/137‑1 (MQ=255) ccGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTg < 7:331995/149‑1 (MQ=255) cGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTgg > 8:99074/1‑149 (MQ=255) gCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGcc < 1:255087/149‑1 (MQ=255) acacaTAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTc < 1:147474/133‑1 (MQ=255) acacaTAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTc > 2:147474/1‑133 (MQ=255) caTAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTgg < 5:252045/137‑1 (MQ=255) caTAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTgg > 6:252045/1‑137 (MQ=255) aTAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCg > 6:126310/1‑139 (MQ=255) aTAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCg < 5:126310/139‑1 (MQ=255) aTAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGgc > 6:214391/1‑149 (MQ=255) aTAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACACCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTg > 4:106523/1‑145 (MQ=255) aTAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACACCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTg < 3:106523/145‑1 (MQ=255) gggCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTtg > 7:1260/1‑90 (MQ=255) gggCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTtg < 8:1260/90‑1 (MQ=255) ggCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTa < 5:318172/149‑1 (MQ=255) gAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGt > 7:104251/1‑140 (MQ=255) gAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGt < 8:104251/140‑1 (MQ=255) ggTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTa < 5:214391/149‑1 (MQ=255) gAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGACGCCGTAGATGATCGGTACgg > 5:269951/1‑149 (MQ=255) gTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCt > 2:116459/1‑149 (MQ=255) cTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCgg < 2:214415/132‑1 (MQ=255) cTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCgg > 1:214415/1‑132 (MQ=255) tCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGAc > 2:114214/1‑98 (MQ=255) tCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGAc < 1:114214/98‑1 (MQ=255) tCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAg < 8:265490/113‑1 (MQ=255) tCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAg > 7:265490/1‑113 (MQ=255) tCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCa > 4:218758/1‑139 (MQ=255) tCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCa < 3:218758/139‑1 (MQ=255) tCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGa > 6:95842/1‑148 (MQ=255) gtGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATCTTCAc < 5:153477/148‑1 (MQ=255) cgcgACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATCTTCACCTg < 1:208349/149‑1 (MQ=255) gcgACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATCTTCACCTgg < 2:251939/149‑1 (MQ=255) gcgACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATCTTCACCTgg > 6:62375/1‑149 (MQ=255) gcgACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATCTTCACCTgg > 1:251939/1‑149 (MQ=255) gACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATCTTCACCTGGt > 4:336912/1‑148 (MQ=255) gACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATCTTCACCTGGt > 4:342204/1‑148 (MQ=255) gttcaTCGCCAATGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATCTTCACCTGGTAACCCa < 4:202800/141‑1 (MQ=255) gttcaTCGCCAATGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATCTTCACCTGGTAACCCAgagat > 3:202800/4‑145 (MQ=255) gcACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATCTTCACCTGGTAACCCAGGCtt > 6:69529/1‑149 (MQ=255) ttcaTCGCCAATGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATc < 4:59700/125‑1 (MQ=255) ttcaTCGCCAATGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATc > 3:59700/3‑127 (MQ=255) acaTCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATCTTCACCTGGTAACCCAGGCTTTc < 5:62375/149‑1 (MQ=255) aTCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATCTTCACCTGGTAACCCAGGCTTTc > 1:343592/1‑147 (MQ=255) aTCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATCTTCACCTGGTAACCCAGGCTTTCCa < 1:116459/149‑1 (MQ=255) aTTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATCTTCACCTGGTAACCCAGGCTTTCCAGTAACa < 7:99074/149‑1 (MQ=255) ttGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATCTTCACCTGGTAACCCAGGCTTTCCAGTAACAg < 2:343592/149‑1 (MQ=255) | CGATTCCGTACAGTTTTTTGTCGAACTGCCCGGCGTGTTTTTGCAGGTCAGCGAAGTCCTTCACCCCGGCATTCCACACATAGTCGGGCACTGCGAGGGTGAACTCGGTTCCCTCCAGGTTGCGCGACAGCTGCTGCACATCGCCATTGGCGATGAACTTGTCATGGAAGCCTTGCTGCGCCGGCATCCAGTTTCCGAGGAAGGCGTCGACCTGGCCGTCCTTGAGGCCGCCGTAGATGATCGGTACGGCCAGGCTGTCGATCTTCACCTGGTAACCCAGGCTTTCCAGTAACAG > NC_002947/87347‑87641 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |