| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,218,238 | T→A | 5.3% | F96I (TTC→ATC) ‡ | PP_4598 → | membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,218,238 | 0 | T | A | 5.3% | 235.9 / 2.8 | 75 | F96I (TTC→ATC) ‡ | PP_4598 | membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (39/32); new base A (2/2); total (41/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.85e-01 | |||||||||||
CGTATTTCTACCCGGTCAGCGCCACGCCGTTCACCTTGCTGGGCCTGTCGCTGTCGATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAGCTGCCAGGCCGTGGCTGGCCCGGGCCGATGC > NC_002947/5218092‑5218386 | cGTATTTCTACCCGGTCAGCGCCACGCCGTTCACCTTGCTGGGCCTGTCGCTGTCGATCTTCATGAGCTTTCGCAACAACGCTTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCtcgttc < 5:289537/149‑1 (MQ=255)cGTATTTCTACCCGGTCAGCGCCACGCCGTTCACCTTGCTGGGCCTGTCGCTGTCGATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCtcgttc < 6:220523/149‑1 (MQ=255) aTTTCTACCCGGTCAGCGCCACGCCGTTCACCTTGCTGGGCCTGTCGCTGTCGATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTg > 8:196516/1‑149 (MQ=255) cTACCCGGTCAGCGCCACGCCGTTCACCTTGCTGGGCCTGTCGCTGTCGATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTAACGAAACCCCCTCGTTAGTGCgg > 6:246153/1‑148 (MQ=255) cccGGTCAGCGCCACGCCGTTCACCTTGCTGGGCCTGTCGCTGTCGATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGa < 5:1808/147‑1 (MQ=255) cccGGTCAGCGCCACGCCGTTCACCTTGCTGGGCCTGTCGCTGTCGATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGa > 5:358490/1‑147 (MQ=255) aGCGCCACGCCGTTCACCTTGCTGGGCCTGTCGCTGTCGATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCgtgg < 7:196516/148‑1 (MQ=255) ccGTTCACCTTGCTGGGCCTGTCGCTGTCGATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCgtgg > 4:29577/1‑139 (MQ=255) ccGTTCACCTTGCTGGGCCTGTCGCTGTCGATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCgtgg < 3:29577/139‑1 (MQ=255) gCTGGGCCTGTCGCTGTCGATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTg < 7:65040/148‑1 (MQ=255) cTGGGCCTGTCGCTGTCGATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTgcg > 2:256026/1‑149 (MQ=255) gCCTGTCGCTGTCGATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCAcc > 8:192226/1‑149 (MQ=255) ctgtcgctgtcgATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGc < 4:315550/109‑1 (MQ=255) ctgtcgctgtcgATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGc > 3:315550/1‑109 (MQ=255) gtcgctgtcgATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCtcgt > 6:75804/1‑101 (MQ=255) tcgctgtcgATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGaa < 7:192226/147‑1 (MQ=255) tcgATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACtgctgc < 1:256026/148‑1 (MQ=255) gATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCgtgg < 7:302439/110‑1 (MQ=255) gATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCgtgg > 8:302439/1‑110 (MQ=255) gATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTgcgc > 6:194280/1‑148 (MQ=255) ttCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAaca > 4:232690/1‑123 (MQ=255) ttCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAaca < 3:232690/123‑1 (MQ=255) ttCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCt > 5:152024/1‑149 (MQ=255) tCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCtg > 8:186653/1‑149 (MQ=255) cATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGTTGGGAGGGGCGCAAGGCCTTGGGCAAACTGATTATCGAAACCCGCGCGTTCGTCCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAAc < 5:246153/145‑1 (MQ=255) cATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCtgt > 7:332070/1‑149 (MQ=255) aTGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCtgt < 6:358490/148‑1 (MQ=255) tGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACtgctgc < 7:200991/138‑1 (MQ=255) tGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACtgctgc > 8:200991/1‑138 (MQ=255) aGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCgg < 2:159005/90‑1 (MQ=255) aGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCgg > 1:159005/1‑90 (MQ=255) aGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCtgtgtg < 8:332070/148‑1 (MQ=255) cTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGtt > 1:5998/1‑149 (MQ=255) tttCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCCGGAAAGCGTCGTGATTACAGACGAAACAATGCTCACCGAACTGCTGAGTAACCTGTGTGGttt > 7:102766/1‑149 (MQ=255) tttCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCACGAACGAGCgggttt < 6:117144/91‑4 (MQ=255) tCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAAc > 1:121402/1‑136 (MQ=255) tCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAAc < 2:121402/136‑1 (MQ=255) gCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGc < 7:150786/148‑1 (MQ=255) caacaaCGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGcc > 6:104789/1‑148 (MQ=255) aacaacGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTc > 5:100942/1‑144 (MQ=255) aacaacGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTc < 6:100942/144‑1 (MQ=255) agaacGCGTGGTATGAGCGTTGGTGGGAGGGGCGGAATGCCTGGGGCAAACTGTTTATCGAAACCGGCGCGTTCGTGCGGGTAAGCGTGGTGATTACCGACGAAAGACTGCCCACCGAACTGCTGCGAAACCTTTGTGGTTTCGCGCAt < 8:102766/147‑1 (MQ=255) caacGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGtt > 6:245689/1‑140 (MQ=255) caacGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGtt < 5:245689/140‑1 (MQ=255) caacGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATg > 4:108359/1‑149 (MQ=255) aacGCGTACTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCtgtgt < 5:172402/135‑1 (MQ=255) aacGCGTACTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCtgtgt > 6:172402/1‑135 (MQ=255) gcgTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACt > 6:60816/1‑149 (MQ=255) gcgTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACt > 1:313179/1‑149 (MQ=255) tGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCaa < 5:194280/149‑1 (MQ=255) tATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGaa > 1:74256/1‑108 (MQ=255) tATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGaa < 2:74256/108‑1 (MQ=255) tATGACCGTTGGTGGGAGGGGCGCAAGGCCAGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGc > 1:206792/1‑149 (MQ=255) tGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGc < 2:313179/147‑1 (MQ=255) gTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTg > 4:153911/1‑149 (MQ=255) gTTGGTGGGAGGGGCGCAAGGCCT‑GGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGc > 7:326908/1‑149 (MQ=255) ttGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGc < 2:5998/149‑1 (MQ=255) ggAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAAc > 8:118052/1‑148 (MQ=255) gAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGa < 3:108359/149‑1 (MQ=255) aGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAg < 6:152024/149‑1 (MQ=255) gggCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGa < 5:104789/149‑1 (MQ=255) gggCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACCCAATGCCCGGCTGCGTAACGAg < 8:301693/147‑1 (MQ=255) gggCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACCCAATGCCCGGCTGCGTAACGAg > 7:301693/1‑147 (MQ=255) gcgcAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGCGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGAc > 8:112661/1‑148 (MQ=255) tGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAGc > 1:329565/1‑149 (MQ=255) gCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAGCTGcc < 3:153911/149‑1 (MQ=255) aaCTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAGCTGCCAgg < 7:118052/149‑1 (MQ=255) aaCTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAGCTGCCAgg > 6:69010/1‑149 (MQ=255) gATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAGCTGCCAGGCCGt > 3:70878/1‑149 (MQ=255) aTTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAAAGAGGACGAACGGGCAGCTGCCAGGCCGtg > 5:316866/1‑149 (MQ=255) ttATCGAAACGCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAGCTGCCAGGCCGtgg < 7:186653/149‑1 (MQ=255) tCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAg < 1:202349/119‑1 (MQ=255) tCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAg > 2:202349/1‑119 (MQ=255) tttcccGCACGAACGAGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAGCTGcc < 6:260882/131‑1 (MQ=255) tttcccGCACGAACGAGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAGCTGcc > 5:260882/4‑134 (MQ=255) ttcccGCACGAACGAGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTTGTTTCGCCCATGCACTCAATGCCCGGATGCGTAACGAGGACGAACCGGCAGCTGCCAGGCCGTGGCTGcccc > 8:32436/3‑149 (MQ=255) ccGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAGCTGCCAGGCCGTGGCTGGCCCggg > 5:351271/1‑149 (MQ=255) gCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAGCTGCCAGGCCGTGGCTGGCCCGGGcc > 5:111858/1‑149 (MQ=255) gttcgtGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAg < 5:322114/119‑1 (MQ=255) gttcgtGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAg > 6:322114/1‑119 (MQ=255) gttcgtGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAGCTGCCAGGCCGTGGCTGGCCCGGGc < 1:279004/144‑1 (MQ=255) gttcgtGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAGCTGCCAGGCCGTGGCTGGCCCGGGc > 2:279004/1‑144 (MQ=255) gttcgtGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAGCTGCCAGGCCGTGGCTGGCCCGGGCCGa < 2:206792/147‑1 (MQ=255) gttcgtGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAGCTGCCAGGCCGTGGCTGGCCCGGGCCGAt < 5:60816/148‑1 (MQ=255) ttcgtGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAGCTGCCAGGCCGTGGCTGGCCCGGGCCGATGc < 6:351271/149‑1 (MQ=255) | CGTATTTCTACCCGGTCAGCGCCACGCCGTTCACCTTGCTGGGCCTGTCGCTGTCGATCTTCATGAGCTTTCGCAACAACGCGTGCTATGACCGTTGGTGGGAGGGGCGCAAGGCCTGGGGCAAACTGATTATCGAAACCCGCTCGTTCGTGCGGGAAAGCGTGGTGATTACCGACGAAACACTGCGCACCGAACTGCTGCGCAACCTGTGTGGTTTCGCCCATGCACTCAATGCCCGGCTGCGTAACGAGGACGAACGGGCAGCTGCCAGGCCGTGGCTGGCCCGGGCCGATGC > NC_002947/5218092‑5218386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |