| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,264,296 | C→A | 7.3% | intergenic (‑50/+34) | zinU ← / ← PP_4640 | P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,264,296 | 0 | C | A | 7.3% | 211.5 / 5.7 | 68 | intergenic (‑50/+34) | zinU/PP_4640 | P‑loop guanosine triphosphatase‑dependent zinc chaperone/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (32/30); new base A (2/3); total (34/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.70e-01 | |||||||||||
GAGCTTCAGGCCATGCTCGGCCTTGAGCATGTACTTGAGCAAGGTGGTCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGTTTTCTGCATGTGTTCGACA > NC_002947/5264151‑5264444 | gAGCTTCAGGCCATGCTCGGCCTTGAGCATGTACTTGAGCAAGGTGGTCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCa < 8:119365/149‑1 (MQ=255) ttCAGGCCATGCTCGGCCTTGAGCATGTACTTGAGCAAGGTGGTCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCt > 7:97171/1‑149 (MQ=255) gCCATGCTCGGCCTTGAGCATGTACTTGAGCAAGGTGGTCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCCTGGGTAACC‑GGCTCCcac < 6:103573/149‑1 (MQ=255) cATGCTCGGCCTTGAGCATGTACTTGAGCAAGGTGGTCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAg > 8:115213/1‑149 (MQ=255) cATGCTCGGCCTTGAGCATGTACTTGAGCAAGGTGGTCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAg > 8:120123/1‑149 (MQ=255) cATGCTCGGCCTTGAGCATGTACTTGAGCAAGGTGGTCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAg > 8:247418/1‑149 (MQ=255) gCCTTGAGCATGTACTTGAGCAAGGTGGTCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTac‑ac > 8:87971/1‑149 (MQ=255) agaaTGTACTTGAGCAAGGTGGTCTTGGCGGCAGCGAGGAAGCCTGTGAGGACGGTTTCGGGAATTGGCATCTGCAAGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTAGCCAGGc < 6:263509/124‑1 (MQ=255) aGCATGTACTTGAGCAAGGTGGTCTTGCCGGCACCGAGGAAGACTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCAGAAAAT‑GACTCTGGGAGAC‑GGTTACCAAgac > 5:263509/1‑125 (MQ=255) cATGTACTTGAGCAAGGTGGTCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCa < 3:329420/149‑1 (MQ=255) cATGTACTTGAGCAAGGTGGTCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCa < 8:97171/149‑1 (MQ=255) aTGTACTTGAGCAAGGTGGTCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCCTGGGTAACC‑GGCTCCcaca < 1:275668/131‑1 (MQ=255) aTGTACTTGAGCAAGGTGGTCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCCTGGGTAACC‑GGCTCCcaca > 2:275668/1‑131 (MQ=255) aTGTACTTGAGCAAGGTGGTCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAg < 7:115213/149‑1 (MQ=255) aTGTACTTGAGCAAGGTGGTCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAg < 7:120123/149‑1 (MQ=255) aGCAAGGTGGTCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAg < 7:87971/149‑1 (MQ=255) ggtggtCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAATCGACTGTGGGAGCC‑GGTTACCCAGGCTcc < 1:197270/114‑1 (MQ=255) ggtggtCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTcc > 2:197270/1‑113 (MQ=255) gtggtCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTg > 7:136131/1‑149 (MQ=255) tggtCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGTCATCTGCACGCAAAATACTCCTTAATCTGAAAAT‑GTCTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTgg < 1:277874/149‑1 (MQ=255) tggtCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTgg > 8:149171/1‑149 (MQ=255) gtCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTggg < 7:284145/148‑1 (MQ=255) ggCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACtt < 1:333452/149‑1 (MQ=255) aCCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAgg > 3:63261/1‑121 (MQ=255) aCCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAgg < 4:63261/121‑1 (MQ=255) cTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTCCCACCGTAACGt < 7:149171/148‑1 (MQ=255) tgtgAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGc > 2:188852/1‑149 (MQ=255) gggAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAAc < 6:49523/130‑1 (MQ=255) gggAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAAc > 5:49523/1‑130 (MQ=255) gAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCgg > 5:158903/1‑148 (MQ=255) ggCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTgg < 5:154779/102‑1 (MQ=255) ggCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTgg > 6:154779/1‑102 (MQ=255) tGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCg > 7:49325/1‑149 (MQ=255) cACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCg < 7:247418/147‑1 (MQ=255) aaaaTACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCtc > 2:324693/1‑148 (MQ=255) aaaaTACTACAGAATCTGAAAAT‑GACTGTGGGAGAC‑CGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACAGCAGCCTCAACAGCACTTGGGCCCGTACTTGCCAACGTAACGTCCTTCCTGACGTTCTAGTAAGAATGACTCTTAGCtca > 8:177872/1‑149 (MQ=255) cTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCg < 1:188852/149‑1 (MQ=255) tCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCtc < 7:41969/141‑1 (MQ=255) tCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCtc > 8:41969/1‑141 (MQ=255) cTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGc > 1:158285/1‑148 (MQ=255) cTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGc < 2:158285/148‑1 (MQ=255) tGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGgaa < 6:50400/122‑1 (MQ=255) tGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCtt > 5:104959/1‑149 (MQ=255) tGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCtt > 5:159791/1‑149 (MQ=255) tGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGATTCCTGACGTTCGCGgaa > 5:50400/1‑122 (MQ=255) aTCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTc < 8:49325/149‑1 (MQ=255) tCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTACGACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTc > 1:257251/1‑149 (MQ=255) tCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTcc > 1:124005/1‑149 (MQ=255) tGAGAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCg > 5:173618/1‑148 (MQ=255) agaaT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCg < 6:173618/144‑1 (MQ=255) cTGTGGGAGCCTGGGTAACC‑GGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGAt > 1:45147/1‑142 (MQ=255) cTGTGGGAGCCTGGGTAACC‑GGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGAt < 2:45147/142‑1 (MQ=255) tgtgGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGTTTTc > 5:174313/1‑149 (MQ=255) tgGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGtttt < 3:69944/146‑1 (MQ=255) tgGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGTTTTCt < 6:104959/148‑1 (MQ=255) tgGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGATCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGtttt > 4:69944/1‑146 (MQ=255) ggAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCCCCGTAACGAGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGTTTTCTGCa > 3:99039/1‑149 (MQ=255) ggAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCg > 6:45156/1‑112 (MQ=255) ggAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCg < 5:45156/112‑1 (MQ=255) ggAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGTTTTCTGc < 6:158903/148‑1 (MQ=255) gAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGTTTTCTGCAt < 2:257251/149‑1 (MQ=255) gAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGTTTTCTGCAt < 6:159791/149‑1 (MQ=255) gAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGTTTTCTGCAt < 2:124005/149‑1 (MQ=255) ggTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGTTTTCTGCAt < 8:4891/144‑1 (MQ=255) ggTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGTTTTCTGCATGTGtt > 5:104693/1‑149 (MQ=255) ggTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGGTTTCTGCAt > 7:4891/1‑144 (MQ=255) gTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGTTTTCTGCATGTGTTc > 3:331489/1‑149 (MQ=255) ttACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGTTTTCTGCATGTGTTCg < 4:331489/149‑1 (MQ=255) cccATGATCCCACATGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCAACGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTTTCCGTATGCTTTTTCTGCATGTGTTCGACa < 7:177872/149‑1 (MQ=255) cccAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGTTTTCTGCATGTGTTCGAc > 3:21325/1‑148 (MQ=255) cccAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGTTTTCTGCATGTGTTCGAc < 4:21325/148‑1 (MQ=255) cccAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGTTTTCTGCATGTGTTCGACa < 1:324693/149‑1 (MQ=255) | GAGCTTCAGGCCATGCTCGGCCTTGAGCATGTACTTGAGCAAGGTGGTCTTGCCGGCACCGAGGAAGCCTGTGAGGACGGTTACGGGAATGGGCATCTGCACGCAAAATACTCCTGAATCTGAAAAT‑GACTGTGGGAGCC‑GGTTACCCAGGCTCCCACAGGTTTAC‑ACGAACCGCAGGCTCAACAGCACTTGGGCCCGGACTTGCCACCGTAACGTGCTTCCTGACGTTCGCGGAAGAATGCCTCGTAGCTCATCACCGGCTTGTCCGGATGCGTTTTCTGCATGTGTTCGACA > NC_002947/5264151‑5264444 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |