| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,359,060 | T→A | 5.5% | I404F (ATC→TTC) | nusA ← | transcription termination/antitermination factor L |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,359,060 | 0 | T | A | 5.5% | 225.5 / 2.5 | 72 | I404F (ATC→TTC) | nusA | transcription termination/antitermination factor L |
| Reads supporting (aligned to +/- strand): ref base T (31/37); new base A (2/2); total (33/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
CGCCAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATGTCAC > NC_002947/5358917‑5359206 | cGCCAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGGAGATGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAACCGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTc > 1:100257/1‑149 (MQ=255) cAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGt < 4:288235/149‑1 (MQ=255) cAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCaaa < 7:147632/148‑1 (MQ=255) cAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCaaa < 5:281170/148‑1 (MQ=255) aGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGc > 2:5971/1‑149 (MQ=255) aGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGAAGACATCGTCaatga < 5:156160/149‑4 (MQ=255) gccgccAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGAAGACATCGTCaatgag < 7:127901/149‑5 (MQ=255) ccgccAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCa < 7:237730/149‑1 (MQ=255) cgccAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCAt < 4:315046/149‑1 (MQ=255) gTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGt > 5:105302/1‑149 (MQ=255) tCTTTTTCCATGCGCTCATGGGTGAGTAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTGTTCTGTAGCGATGGGCTTGGTCAACAAACGGTCCTTGTGGCGAGCGCGGAGGTCATTGACGATGTCTTCGTCAAAGCCATCGATGtt < 8:134406/149‑1 (MQ=255) tCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGtt < 6:289956/149‑1 (MQ=255) tCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCAt < 7:281779/149‑1 (MQ=255) cATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCAtt > 4:94371/1‑148 (MQ=255) gCCCTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATttct > 8:221404/1‑148 (MQ=255) cccTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATttcttc < 6:19388/149‑1 (MQ=255) ccTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAg > 4:289215/1‑125 (MQ=255) ccTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAg < 3:289215/125‑1 (MQ=255) ccTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATttcttc > 4:16133/1‑148 (MQ=255) tCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCaa > 1:135360/1‑149 (MQ=255) tCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCaa > 1:47953/1‑149 (MQ=255) agCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTa < 2:47953/149‑1 (MQ=255) agCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTa < 7:221404/149‑1 (MQ=255) cAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGt > 5:207378/1‑146 (MQ=255) cAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGt < 6:207378/146‑1 (MQ=255) aGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTc > 2:347519/1‑104 (MQ=255) ttCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATttcttc > 4:309961/1‑129 (MQ=255) cGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATttcttc > 1:291729/1‑147 (MQ=255) cGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCaa < 3:94371/149‑1 (MQ=255) gg‑g‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGAAGACATCGTCaatg > 2:289631/1‑97 (MQ=255) g‑g‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAgg < 3:16133/149‑1 (MQ=255) gTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAg < 8:179483/141‑1 (MQ=255) gTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAg > 7:179483/1‑141 (MQ=255) ccAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCt > 2:28466/1‑149 (MQ=255) cAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGa > 6:164980/1‑98 (MQ=255) cAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCtt > 8:196909/1‑149 (MQ=255) gTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTtcg > 7:217224/1‑149 (MQ=255) tttttCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTtcgt > 7:227439/1‑149 (MQ=255) tttCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTtcgtc < 6:105302/148‑1 (MQ=255) tttCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTtcgtc < 1:5971/148‑1 (MQ=255) cttcGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTTGTGAAGCCTTCGTCGAc < 2:135360/148‑1 (MQ=255) gTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGa < 4:212232/142‑1 (MQ=255) gTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGa > 3:212232/1‑142 (MQ=255) cGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTgg < 1:263381/149‑1 (MQ=255) gATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGCCGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGt < 1:77480/97‑1 (MQ=255) gATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGt > 2:77480/1‑97 (MQ=255) gATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAg > 7:195768/1‑141 (MQ=255) gATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAg > 7:190619/1‑141 (MQ=255) gATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAg < 8:190619/141‑1 (MQ=255) gATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAg < 8:195768/141‑1 (MQ=255) cTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCTTCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTg < 1:111377/141‑1 (MQ=255) cTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTg > 2:111377/1‑141 (MQ=255) cTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGct > 5:97554/1‑149 (MQ=255) ttGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGc < 4:58140/135‑1 (MQ=255) ttGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGc > 3:58140/1‑135 (MQ=255) aacaaACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTtcgt > 1:217435/1‑121 (MQ=255) aacaaACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTtcgt < 2:217435/121‑1 (MQ=255) caaACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGc > 7:204792/1‑135 (MQ=255) caaACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGc < 8:204792/135‑1 (MQ=255) gTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCa < 2:291729/149‑1 (MQ=255) gCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCt < 7:196909/148‑1 (MQ=255) tCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGAGCAGCACTTGGTCCAGCTCCTCGTCGACTTCCAGTTCCTCGa > 5:304501/1‑149 (MQ=255) gAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGAt < 8:217224/148‑1 (MQ=255) gAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGAt < 7:262070/148‑1 (MQ=255) cgcgGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGTCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGaaa < 6:304501/149‑1 (MQ=255) cTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCa < 6:97554/149‑1 (MQ=255) tCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTgg < 2:81487/105‑1 (MQ=255) tCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTgg > 1:81487/1‑105 (MQ=255) gctgtGACGAAGACATCGTCAACGCCATCGATGTTGAGCAGTTCATCCAGCGCTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGCCGAGCAGTTCGGCCAGCTCCACGACGCCTACCAGATCCTCCATGAAAATCCGCac > 8:241981/5‑148 (MQ=255) aTTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCa < 3:116724/146‑1 (MQ=255) aTTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCa > 4:116724/1‑146 (MQ=255) gATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATGTCAc < 1:28466/149‑1 (MQ=255) | CGCCAGTTCAGCCGCCAGGTCTTTGTCCATGCCCTCAAGGGAGAGCAGGTCTTCGGCCGG‑G‑TGGGCGTCTGCCAGTTTTTCTTCGGTAGCGATGGCCTTGGTCAACAAACGGTCCTTGGCTCGAGCGCGGAGCTCATTGACGATGTCTTCGTCAAAGCCATCGATGTTGAGCATTTCTTCCAACGGTACGTAGGCAATTTCTTCAAGGCTGGTGAAGCCTTCGTCGACCAGCACTTGGGCCAGCTCCTCGTCGACTTCCAGTTCCTCGATGAAATTGCGCAGGATGTCAC > NC_002947/5358917‑5359206 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |