| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 100,112 | C→A | 5.3% | G99G (GGG→GGT) | PP_0094 ← | 5'‑nucleotidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 100,112 | 0 | C | A | 5.3% | 246.4 / 3.5 | 76 | G99G (GGG→GGT) | PP_0094 | 5'‑nucleotidase |
| Reads supporting (aligned to +/- strand): ref base C (35/37); new base A (2/2); total (37/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.92e-01 | |||||||||||
GCGAATCAGCTCGACCTTGTTGGTGCGCGTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTAGAACTGCATGAAAGCCTGCAG > NC_002947/99965‑100258 | gCGAATCAGCTCGACCTTGTTGGTGCGCGTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGcc > 1:165238/1‑149 (MQ=255) gAATCAGCTCGACCTTGTTGGTGCGCGTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCg > 6:43381/1‑149 (MQ=255) gCTCGACCTTGTTGGTGCGCGTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAgg < 5:360620/149‑1 (MQ=255) gCTCGACCTTGTTGGTGCGCGTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAgg < 3:216459/149‑1 (MQ=255) gCTCGACCTTGTTGGTGCGCGTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAgg < 1:346216/149‑1 (MQ=255) gCTCGACCTTGTTGGTGCGCGGGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAgg < 3:3838/149‑1 (MQ=255) cTCGACCTTGTTGGTGCGCGTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAggg > 8:170232/1‑149 (MQ=255) gACCTTGTTGGTGCGCGTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGGGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCt > 2:26581/1‑149 (MQ=255) gACCTTGTTGGTGCGCGTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGc < 2:165238/147‑1 (MQ=255) gACCTTGTTGGTGCGCGTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCt > 7:132840/1‑149 (MQ=255) gACCTTGTTGGTGCGCGTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCt > 6:199066/1‑149 (MQ=255) ccTTGTTGGTGCGCGTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTc > 3:30768/1‑148 (MQ=255) cTTGTTGGTGCGCGTGCCGTTCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCaa < 4:20053/149‑1 (MQ=255) cTTGTTGGTGCGCGTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACTCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCaa < 4:30768/149‑1 (MQ=255) cTTGTTGGTGCGCGTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCaa < 5:43381/149‑1 (MQ=255) gttgGTGCGCGTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑Gc < 1:147845/148‑1 (MQ=255) tgGTGCGCGTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGGTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCaa > 4:244142/1‑148 (MQ=255) gcgTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGc < 5:199066/149‑1 (MQ=255) ttCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCtt < 8:39440/143‑1 (MQ=255) ttCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCtt > 7:39440/1‑143 (MQ=255) ccGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGGGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAATGCAACTCCGGCAC‑ACCTTCGAACACGAgg < 1:26581/148‑1 (MQ=255) gTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGtttt > 1:142950/1‑149 (MQ=255) tAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTc < 2:142950/149‑1 (MQ=255) cACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGcac < 2:195656/123‑1 (MQ=255) cACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGcac > 1:195656/1‑123 (MQ=255) aCCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTaaa < 7:170232/148‑1 (MQ=255) cTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAg < 3:248918/135‑1 (MQ=255) cTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAg > 4:248918/1‑135 (MQ=255) gatCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCAcgcg > 3:145825/1‑148 (MQ=255) atCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAg < 1:229207/123‑1 (MQ=255) atCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCACGCAC‑CCCATCGAACACGAg > 2:229207/1‑123 (MQ=255) tCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGaa < 3:244142/149‑1 (MQ=255) gAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAg < 4:145825/148‑1 (MQ=255) cGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACCGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAg > 8:208808/1‑147 (MQ=255) gAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACCGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAg < 7:208808/149‑1 (MQ=255) gAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGtttt > 6:25104/1‑111 (MQ=255) gAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGtttt < 5:25104/111‑1 (MQ=255) cgcgGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCa > 7:1547/1‑149 (MQ=255) gAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGt < 2:170327/128‑1 (MQ=255) gAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGt > 1:170327/1‑128 (MQ=255) gAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAgg > 7:275481/1‑149 (MQ=255) gAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAgg > 8:98325/1‑149 (MQ=255) ccATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTaaa > 8:170082/1‑95 (MQ=255) ccATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTaaa < 7:170082/95‑1 (MQ=255) ccATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGaa < 2:94543/126‑1 (MQ=255) ccATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCAcc < 5:139893/133‑1 (MQ=255) ccATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCAcc > 6:139893/1‑133 (MQ=255) ccATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTgg > 2:290034/1‑149 (MQ=255) cATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAgg < 1:349823/84‑1 (MQ=255) cATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAgg > 2:349823/1‑84 (MQ=255) cATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTACCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGc < 7:126128/149‑1 (MQ=255) tttGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTtcgt < 8:132840/149‑1 (MQ=255) gAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTtcgtcg > 6:216776/1‑147 (MQ=255) gAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGaa < 5:249292/149‑1 (MQ=255) aGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAg > 4:33119/1‑149 (MQ=255) gCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTg > 1:281728/1‑147 (MQ=255) cAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTAGAACTGc < 8:1547/148‑1 (MQ=255) aGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTgg < 2:321577/124‑1 (MQ=255) aGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTgg > 1:321577/1‑124 (MQ=255) aGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTtcgt < 5:312614/130‑1 (MQ=255) aGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTtcgt > 6:312614/1‑130 (MQ=255) aGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTAGaa < 7:140563/143‑1 (MQ=255) aGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTAGaa > 8:140563/1‑143 (MQ=255) ttgaggCCCTGAACGGGCAGGGCCGCAA‑GCTACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTAGAACTGCa > 1:29011/5‑145 (MQ=255) ttgaggCCCTGAACGGGCAGGGCCGCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTAGAACTGCa < 2:29011/141‑1 (MQ=255) gTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTcg < 3:287298/90‑1 (MQ=255) gTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTcg > 4:287298/1‑90 (MQ=255) tGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTAGAACTGCATGaaa < 8:275481/149‑1 (MQ=255) tGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTAGAACTGCATGa > 6:275985/1‑147 (MQ=255) ggCCCTGACCGGGCAGGGCCTCAA‑GCAACTCCGGCAC‑TCCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTAGAACTGCATGaaa < 1:290200/146‑1 (MQ=255) ggCCCTGAACGGGCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTAGAACTGCATGaaa > 2:290200/1‑146 (MQ=255) gCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTAGAACTGCATGAAAGCCt > 8:196796/1‑149 (MQ=255) cccTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTa < 8:161933/131‑1 (MQ=255) cccTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTa > 7:161933/1‑131 (MQ=255) cccTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTAGAACTGCATGaaa < 7:138228/144‑1 (MQ=255) cccTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTAGAACTGCATGaaa > 8:138228/1‑144 (MQ=255) cTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCACGACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTAGAACTGCATGAAAGCCTg > 1:47669/1‑148 (MQ=255) cccGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTAGAACTGCATGAAAGCCTgcag > 5:137406/1‑147 (MQ=255) | GCGAATCAGCTCGACCTTGTTGGTGCGCGTGCCGTCCAGTTCACTGCCGTAGATCACCTTGAAGTGATGATCGAACGCAAAGTGCCGAGCGATTTCGCGGGCGAACTCCCATGGTTTGGAGGTGGCAATGTACAGCGTGCGGCCCTGCCCGTTCAGGGCCTCAA‑GCAACTCCGGCAC‑ACCTTCGAACACGAGGTTTTCGTAAAGACCGGTCACGCGGAAGCGCTCGCGGTAGAAGTTCACCGCATCCCAGGCCTTGGCTTCGTCGAAGCTGTAGAACTGCATGAAAGCCTGCAG > NC_002947/99965‑100258 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |