| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,525,773 | T→G | 9.2% | intergenic (+63/‑60) | PP_4858 → / → PP_4859 | hypothetical protein/TetR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,525,773 | 0 | T | G | 9.2% | 191.5 / 8.9 | 64 | intergenic (+63/‑60) | PP_4858/PP_4859 | hypothetical protein/TetR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (31/27); new base G (2/4); total (33/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.41e-01 | |||||||||||
TCCGATCGTCTGATCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGGAGAGTGGCCGTGGTTTCG > NC_002947/5525630‑5525920 | tCCGATCGTCTGATCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCg < 7:195744/149‑1 (MQ=255) gATCGTCTGATCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCAATGGACCGGGc < 4:49638/149‑1 (MQ=255) gTCTGATCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCAATGGACCGGGcctg < 2:196571/148‑4 (MQ=255) tCTGATCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGt > 6:19618/1‑149 (MQ=255) aTCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCTCCCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGtt < 1:37439/147‑1 (MQ=255) aTCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGttttt > 5:45603/1‑149 (MQ=255) gAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTa > 7:60227/1‑149 (MQ=255) gAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTa > 1:312638/1‑149 (MQ=255) aCAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATc > 5:58763/1‑149 (MQ=255) aCAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCAATGGACCGGGc > 3:295934/1‑135 (MQ=255) aCAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCAATGGACCGGGc < 4:295934/135‑1 (MQ=255) gCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTaga < 6:58763/149‑1 (MQ=255) gCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAAGCCCGGTCAATGGACCGGGcct < 6:86110/133‑3 (MQ=255) gCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAAGCCCGGTCAATGGACCGGGcct > 5:86110/1‑131 (MQ=255) cGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGccc < 6:45603/149‑1 (MQ=255) tCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGc < 2:312638/148‑1 (MQ=255) tGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGAc > 4:121367/1‑149 (MQ=255) gAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCC‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGAcc > 2:171507/1‑149 (MQ=255) aaGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCg > 3:207393/1‑149 (MQ=255) aGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGt < 4:207393/149‑1 (MQ=255) gATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGttttt > 6:215819/1‑113 (MQ=255) gATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGttttt < 5:215819/113‑1 (MQ=255) gCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGca > 2:1267/1‑149 (MQ=255) gCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGc < 8:60227/148‑1 (MQ=255) gCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGc < 5:19618/148‑1 (MQ=255) ccTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTa < 5:48601/115‑1 (MQ=255) ccTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTa > 6:48601/1‑115 (MQ=255) aCTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCC‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGcc < 1:171507/149‑1 (MQ=255) tCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCcgc > 7:76835/1‑149 (MQ=255) tCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCAAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCcgc > 5:287783/1‑149 (MQ=255) ccGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGcatcat > 1:18897/1‑137 (MQ=255) ccGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGcatcat < 2:18897/137‑1 (MQ=255) ccGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCgcgcgc < 4:235663/149‑1 (MQ=255) tGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAg > 3:43377/1‑149 (MQ=255) gtccaaaaGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGccc < 1:289722/105‑1 (MQ=255) gCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGccc > 2:289722/1‑109 (MQ=255) ccGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCg > 3:227354/1‑129 (MQ=255) ccGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCg < 4:227354/129‑1 (MQ=255) aacaacTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCt > 6:327873/1‑149 (MQ=255) caacTTCTGTCACAACGCTTTCT‑CCCCTTCATGGCCGGTTCATTGACCGGGGTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGc < 8:124248/144‑1 (MQ=255) caacTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGc > 6:271768/1‑149 (MQ=255) caacTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAAAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGATGCCGCGCGCCGACCAGAAGCTACAGACCCGCCAGcccag > 7:124248/1‑145 (MQ=255) ccgagctcaACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTGTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGa < 3:253670/141‑1 (MQ=255) tGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATgc > 7:8627/1‑149 (MQ=255) gTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTa > 2:13400/1‑122 (MQ=255) tCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGATTTCCCAGCCTGACCGTTACAGAACCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCAGCACGCTgccg > 8:117942/1‑149 (MQ=255) tCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATgccg > 5:184144/1‑149 (MQ=255) tCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATgc < 4:43377/147‑1 (MQ=255) acaACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATgccgc < 8:8627/148‑1 (MQ=255) acaACGCTTGCT‑CCCCTCCAGGCCAGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATgccgcc > 4:319043/1‑149 (MQ=255) aaCGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCgcctg > 2:7835/1‑149 (MQ=255) aaCGCTTGCT‑CCCCTCCAGGCCCGGACCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGAATCATCCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGcccggagcga > 4:253670/1‑133 (MQ=255) gCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCgcctgcct > 8:300118/1‑149 (MQ=255) cccTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATgccgc < 8:6180/135‑1 (MQ=255) cccTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATgccgc > 7:6180/1‑135 (MQ=255) cccTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATg < 5:271768/148‑1 (MQ=255) ccTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGga < 3:121367/149‑1 (MQ=255) ccTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGga < 8:76835/149‑1 (MQ=255) ccTCCAGGCCAGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGga < 3:319043/149‑1 (MQ=255) ccAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGGagag > 8:182168/1‑149 (MQ=255) cAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGgaga < 7:117942/147‑1 (MQ=255) ggCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGGAGAGTgg < 5:327873/149‑1 (MQ=255) tCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACACGCCAGGCCCTGCTCGATGCCgcctgccag > 3:253620/1‑126 (MQ=255) cATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGGAGAGTGGCCGTGGttt < 1:7835/149‑1 (MQ=255) ttGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGGAGAGTGGCCGTGGTTTCg > 5:112442/1‑149 (MQ=255) | TCCGATCGTCTGATCGAACAAGCTGGCCGTGTCGCTGAAGGTGGCTCGGATCGCCTGGTTGAACTCAGCCGTGTGAGCTGATCGCCATGGCCGAAAAGAACAACTTCTGTCACAACGCTTGCT‑CCCCTCCAGGCCCGGTCCATTGACCGGGCTTTGTTTTTTTATCTAGAGTGCCCAGCCTGACCGTTACAGAAGCCCGCATCATGCTGCCGCGCGCCGAACAGAAGCTACAGACCCGCCAGGCCCTGCTCGATGCCGCCTGCCTGCTCATGGAGAGTGGCCGTGGTTTCG > NC_002947/5525630‑5525920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |