| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,532,750 | C→T | 9.2% | G145D (GGC→GAC) | braD ← | high‑affinity branched‑chain amino acid ABC transporter permease BraD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,532,750 | 0 | C | T | 9.2% | 178.5 / 6.5 | 66 | G145D (GGC→GAC) | braD | high‑affinity branched‑chain amino acid ABC transporter permease BraD |
| Reads supporting (aligned to +/- strand): ref base C (28/31); new base T (4/2); total (33/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.87e-01 | |||||||||||
CCAGGATCGAGGCCATCTTGCGGTCTTGCTGGGTAGCACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCGGTGCCAGGCGGGTGGAGTTAC > NC_002947/5532604‑5532894 | ccAGGATCGAGGCCATCTTGCGGTCTTGCTGGGTAGCACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCg > 7:112864/1‑149 (MQ=255)ccAGGATCGAGGCCATCTTGCGGTCTTGCTGGGTAGCACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCg < 5:80457/149‑1 (MQ=255) aGGATCGAGGCCATCTTGCGGTCTTGCTGGGTAGCACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGa < 7:215017/149‑1 (MQ=255) ggATCGAGGCCATCTTGCTGTCTTGCTGGGTAGCACGGAACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGACGGAc > 6:339529/1‑149 (MQ=255) ggATCGAGGCCATCTTGCGGTCTTGCTGGGTAGCACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGAc > 6:333674/1‑149 (MQ=255) gAGGCCATCTTGCGGTCTTGCTGGGTAGCACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGAc < 8:28036/149‑1 (MQ=255) ggCCATCTTGCGGTCTTGCTGGGTAGCACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCg < 1:56486/139‑1 (MQ=255) ggCCATCTTGCGGTCTTGCTGGGTAGCACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCg > 2:56486/1‑139 (MQ=255) gCCATCTTGCGGTCTTGCTGGGTAGCACCGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTc > 7:258156/1‑149 (MQ=255) ccATCTTGCGGTCTTGCTGGGTAGCACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCg < 3:306223/149‑1 (MQ=255) gCGGTCTTGCTGGGTAGCACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGc < 8:114326/148‑1 (MQ=255) gTCTTGCTGGGTAGCACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCg < 8:108532/127‑1 (MQ=255) ctCTTGCTGGGTAGCACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCg > 7:108532/2‑127 (MQ=255) ttGCTGGGTAGCACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGTCGGGTCCGGCTTCgt > 2:220525/1‑136 (MQ=255) ttGCTGGGTAGCACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGTCGGGTCCGGCTTCgt < 1:220525/137‑2 (MQ=255) ttGCTGGGTAGCACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGAACGAAGCCGGACCCGACTTCGACACGCA‑T‑Ggcgc > 1:271559/1‑149 (MQ=255) gCTGGGTAGCACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAATTCAGTTGCACGAACCCGGACCCGACTTCGACACGCA‑T‑GGCGCCt > 6:169085/1‑149 (MQ=255) cACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACTCA‑T‑GGCGCCTTCCAGCAgg < 5:339529/149‑1 (MQ=255) cACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAgg < 8:258156/149‑1 (MQ=255) cGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGt > 8:121214/1‑149 (MQ=255) tGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGa > 2:291293/1‑111 (MQ=255) tGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGa < 1:291293/111‑1 (MQ=255) ggCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCt > 1:129120/1‑149 (MQ=255) ggCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCt > 8:218893/1‑149 (MQ=255) gAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCt < 2:129120/149‑1 (MQ=255) ggTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTggcgg < 7:218893/148‑1 (MQ=255) ggTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTggcgg < 2:271559/148‑1 (MQ=255) cTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTAGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCt < 2:73822/149‑1 (MQ=255) gATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGc > 7:287142/1‑149 (MQ=255) ggTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCATT‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCtgt < 1:92028/149‑1 (MQ=255) ggTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑TCTGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCtgt < 1:96371/149‑1 (MQ=255) agcagGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTa < 8:112864/149‑1 (MQ=255) cagGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTggc < 3:33669/122‑1 (MQ=255) cagGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTggc > 4:33669/1‑122 (MQ=255) cATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTg > 6:309303/1‑147 (MQ=255) aCAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGGACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGTGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAg < 5:169085/149‑1 (MQ=255) cAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGc > 4:52409/1‑149 (MQ=255) aaaGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGc > 8:291176/1‑148 (MQ=255) cgccACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGc < 3:131809/149‑1 (MQ=255) cgccACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGc > 5:21300/1‑149 (MQ=255) caccaGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGATACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGc > 7:39901/1‑139 (MQ=255) caccaGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGATACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGc < 8:39901/139‑1 (MQ=255) caGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATgg > 7:279286/1‑149 (MQ=255) tGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGAt > 4:61539/1‑127 (MQ=255) tGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGAt < 3:61539/127‑1 (MQ=255) tGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACt > 7:120210/1‑148 (MQ=255) aGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATc < 3:52409/149‑1 (MQ=255) cTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCg > 8:335019/1‑149 (MQ=255) cTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCg > 5:141228/1‑149 (MQ=255) cTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCg > 7:88647/1‑149 (MQ=255) ttGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCgg > 2:56793/1‑149 (MQ=255) tataAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTCGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCGGTGc > 2:37952/1‑148 (MQ=255) gTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACCGCTGATCAGTGCCatcgg < 6:21300/149‑5 (MQ=255) tCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCGGTGCCAGGCgg < 7:335019/149‑1 (MQ=255) aGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCGGTGCCAGGCGGGt > 2:142535/1‑149 (MQ=255) gTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCGGTGCCAGGCGGGTg < 8:88647/149‑1 (MQ=255) ttGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCGGTGCCAGGCGGGTgg < 1:142535/149‑1 (MQ=255) tGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCGGTGCCAGGCGGGTgg < 7:121214/148‑1 (MQ=255) gCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCGGTGCCAGGCGGGTGGa < 7:291176/148‑1 (MQ=255) gCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCGGTGCCAGGCGGGTGGa < 6:141228/148‑1 (MQ=255) gCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCGGTGCCAGGCGGGTGGa < 5:309303/148‑1 (MQ=255) gtcGAAGTCGGGTCCGGCTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGAACTGATCAGCGGTGCCAGGCGGGTGGAGt > 7:36908/3‑149 (MQ=255) tcGAAGTCGGGTCCGGCTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCGGTGCCAGGCGGGTGGAGt > 8:183546/2‑148 (MQ=255) tcGAAGTCGGGTCCGGCTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCGGTGCCAGGCGGGTGGAGt > 3:10495/2‑148 (MQ=255) gAAGTCGGGTCCGGCTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCGGTGCCAGGCGGGTGGAGTTa < 4:10495/148‑1 (MQ=255) gAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCGGTGCCAGGCGGGTGGAGTTAc > 3:24997/1‑149 (MQ=255) | CCAGGATCGAGGCCATCTTGCGGTCTTGCTGGGTAGCACGGCACATGCGGCCGAGCTTGGTGTACTTGATCACGTAGGTCAGCAGGCCCATGCCGACAAAGGCCGCCACCAGGATGAAGATCTTGGTATAAGTCAGTTGCACGAAGCCGGACCCGACTTCGACACGCA‑T‑GGCGCCTTCCAGCAGGGTTGGCACGCCTTGCTGGCGGGCGCCCTGGCTGATCTGTGCGTAGTTCTGCAGGATCAGCGAAATGCCGATGGCACTGATCAGCGGTGCCAGGCGGGTGGAGTTAC > NC_002947/5532604‑5532894 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |